RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 AMNQ9BXJ7 453 aa13.85□□□□□ -0.19
NIP7-201ENST00000254940 ARHGAP39Q9C0H5 1083 aa13.85□□□□□ -0.19
NIP7-201ENST00000254940 SMCO2A6NFE2 343 aa13.84□□□□□ -0.19
NIP7-201ENST00000254940 STAT3P40763 770 aa13.84□□□□□ -0.19
NIP7-201ENST00000254940 PABPC4Q13310 644 aaKnown RBP eCLIP13.84□□□□□ -0.193e-24■■■■■ 72
NIP7-201ENST00000254940 MTMR8Q96EF0 704 aa13.84□□□□□ -0.19
NIP7-201ENST00000254940 TRERF1Q96PN7 1200 aa13.84□□□□□ -0.19
NIP7-201ENST00000254940 MOV10L1Q9BXT6 1211 aaKnown RBP13.84□□□□□ -0.19
NIP7-201ENST00000254940 RNF146Q9NTX7 359 aa13.84□□□□□ -0.19
NIP7-201ENST00000254940 TESPA1A2RU30 521 aaPredicted RBP13.84□□□□□ -0.19
NIP7-201ENST00000254940 OPLAHO14841 1288 aa13.84□□□□□ -0.19
NIP7-201ENST00000254940 PGK2P07205 417 aa13.84□□□□□ -0.19
NIP7-201ENST00000254940 CALML3P27482 149 aa13.84□□□□□ -0.19
NIP7-201ENST00000254940 MARCKSP29966 332 aaPredicted RBP13.84□□□□□ -0.19
NIP7-201ENST00000254940 CAP1Q01518 475 aa13.84□□□□□ -0.19
NIP7-201ENST00000254940 LBX2Q6XYB7 198 aa13.84□□□□□ -0.19
NIP7-201ENST00000254940 PARK7Q99497 189 aaKnown RBP13.84□□□□□ -0.19
NIP7-201ENST00000254940 SPATC1LQ9H0A9 340 aa13.84□□□□□ -0.19
NIP7-201ENST00000254940 PNMA3Q9UL41 463 aa13.84□□□□□ -0.19
NIP7-201ENST00000254940 KIF3AQ9Y496 699 aa13.84□□□□□ -0.19
NIP7-201ENST00000254940 ICAM1P05362 532 aa13.83□□□□□ -0.19
NIP7-201ENST00000254940 ERCC3P19447 782 aa13.83□□□□□ -0.19
NIP7-201ENST00000254940 ME1P48163 572 aa13.83□□□□□ -0.19
NIP7-201ENST00000254940 TM4SF4P48230 202 aa13.83□□□□□ -0.19
NIP7-201ENST00000254940 ERVK-9P63128 1117 aa13.83□□□□□ -0.19
NIP7-201ENST00000254940 ERVK-24P63145 666 aa13.83□□□□□ -0.19
NIP7-201ENST00000254940 PPP2R5BQ15173 497 aa13.83□□□□□ -0.19
NIP7-201ENST00000254940 RNF186Q9NXI6 227 aa13.83□□□□□ -0.19
NIP7-201ENST00000254940 BARHL2Q9NY43 387 aa13.83□□□□□ -0.19
NIP7-201ENST00000254940 ELP1O95163 1332 aa13.83□□□□□ -0.2
NIP7-201ENST00000254940 GRIN1Q05586 938 aa13.83□□□□□ -0.2
NIP7-201ENST00000254940 SPECC1Q5M775 1068 aa13.83□□□□□ -0.2
NIP7-201ENST00000254940 MYSM1Q5VVJ2 828 aa13.83□□□□□ -0.2
NIP7-201ENST00000254940 SLC30A10Q6XR72 485 aa13.83□□□□□ -0.2
NIP7-201ENST00000254940 CFAP45Q9UL16 551 aa13.83□□□□□ -0.2
NIP7-201ENST00000254940 TOB1P50616 345 aaPredicted RBP13.82□□□□□ -0.2
NIP7-201ENST00000254940 TRIM29Q14134 588 aa13.82□□□□□ -0.2
NIP7-201ENST00000254940 NPY5RQ15761 445 aa13.82□□□□□ -0.2
NIP7-201ENST00000254940 CCAR1Q8IX12 1150 aaKnown RBP13.82□□□□□ -0.2
NIP7-201ENST00000254940 UBE2Q2Q8WVN8 375 aa13.82□□□□□ -0.2
NIP7-201ENST00000254940 SYAP1Q96A49 352 aaPredicted RBP13.82□□□□□ -0.2
NIP7-201ENST00000254940 TSPY26PQ9H489 355 aa13.82□□□□□ -0.2
NIP7-201ENST00000254940 PCDHA7Q9UN72 937 aa13.82□□□□□ -0.2
NIP7-201ENST00000254940 ADAMTS5Q9UNA0 930 aa13.82□□□□□ -0.2
NIP7-201ENST00000254940 A0A1B0GVL5 298 aa13.82□□□□□ -0.2
NIP7-201ENST00000254940 CTGFP29279 349 aa13.82□□□□□ -0.2
NIP7-201ENST00000254940 CSPP1Q1MSJ5 1256 aa13.82□□□□□ -0.2
NIP7-201ENST00000254940 GPRC5AQ8NFJ5 357 aa13.82□□□□□ -0.2
NIP7-201ENST00000254940 TEX13BQ9BXU2 312 aa13.82□□□□□ -0.2
NIP7-201ENST00000254940 RCOR1Q9UKL0 485 aa13.82□□□□□ -0.2
NIP7-201ENST00000254940 STK36Q9NRP7 1315 aa13.82□□□□□ -0.2
NIP7-201ENST00000254940 HTTP42858 3142 aa13.81□□□□□ -0.2
NIP7-201ENST00000254940 PDIA4P13667 645 aaKnown RBP13.81□□□□□ -0.2
NIP7-201ENST00000254940 CNTN2Q02246 1040 aa13.81□□□□□ -0.2
NIP7-201ENST00000254940 GNL2Q13823 731 aaKnown RBP13.81□□□□□ -0.2
NIP7-201ENST00000254940 DIS3L2Q8IYB7 885 aaKnown RBP13.81□□□□□ -0.2
NIP7-201ENST00000254940 CLEC4DQ8WXI8 215 aa13.81□□□□□ -0.2
NIP7-201ENST00000254940 CLIC6Q96NY7 704 aa13.81□□□□□ -0.2
NIP7-201ENST00000254940 PSTPIP2Q9H939 334 aa13.81□□□□□ -0.2
NIP7-201ENST00000254940 ZFYVE28Q9HCC9 887 aa13.81□□□□□ -0.2
NIP7-201ENST00000254940 COL20A1Q9P218 1284 aa13.81□□□□□ -0.2
NIP7-201ENST00000254940 PLA2G6O60733 806 aa13.81□□□□□ -0.2
NIP7-201ENST00000254940 ADCY7P51828 1080 aa13.81□□□□□ -0.2
NIP7-201ENST00000254940 BAATQ14032 418 aaPredicted RBP13.81□□□□□ -0.2
NIP7-201ENST00000254940 LINC00301Q8NCQ3 95 aa13.81□□□□□ -0.2
NIP7-201ENST00000254940 ZNFX1Q9P2E3 1918 aaKnown RBP13.8□□□□□ -0.2
NIP7-201ENST00000254940 TLR2O60603 784 aa13.8□□□□□ -0.2
NIP7-201ENST00000254940 SF3A1Q15459 793 aaKnown RBP13.8□□□□□ -0.2
NIP7-201ENST00000254940 PHF20Q9BVI0 1012 aa13.8□□□□□ -0.2
NIP7-201ENST00000254940 MMP1P03956 469 aa13.8□□□□□ -0.2
NIP7-201ENST00000254940 SMARCA1P28370 1054 aa13.8□□□□□ -0.2
NIP7-201ENST00000254940 SNW1Q13573 536 aaKnown RBP13.8□□□□□ -0.2
NIP7-201ENST00000254940 PIK3AP1Q6ZUJ8 805 aa13.8□□□□□ -0.2
NIP7-201ENST00000254940 ANKRD35Q8N283 1001 aa13.8□□□□□ -0.2
NIP7-201ENST00000254940 DNAJC5GQ8N7S2 189 aa13.8□□□□□ -0.2
NIP7-201ENST00000254940 WASF1Q92558 559 aa13.8□□□□□ -0.2
NIP7-201ENST00000254940 FUCA2Q9BTY2 467 aa13.8□□□□□ -0.2
NIP7-201ENST00000254940 NUP62CLQ9H1M0 184 aa13.8□□□□□ -0.2
NIP7-201ENST00000254940 RABGAP1Q9Y3P9 1069 aa13.8□□□□□ -0.2
NIP7-201ENST00000254940 A0A0G2JMZ2 1700 aa13.8□□□□□ -0.2
NIP7-201ENST00000254940 CA12O43570 354 aa13.79□□□□□ -0.2
NIP7-201ENST00000254940 INHBEP58166 350 aa13.79□□□□□ -0.2
NIP7-201ENST00000254940 A1CFQ9NQ94 594 aaKnown RBP13.79□□□□□ -0.2
NIP7-201ENST00000254940 PCDHB6Q9Y5E3 794 aa13.79□□□□□ -0.2
NIP7-201ENST00000254940 MCM3APO60318 1980 aa13.79□□□□□ -0.2
NIP7-201ENST00000254940 BRCA2P51587 3418 aa13.79□□□□□ -0.2
NIP7-201ENST00000254940 CASP8AP2Q9UKL3 1982 aa13.79□□□□□ -0.2
NIP7-201ENST00000254940 ADGRA2Q96PE1 1338 aa13.79□□□□□ -0.2
NIP7-201ENST00000254940 MAP2K2P36507 400 aa13.79□□□□□ -0.2
NIP7-201ENST00000254940 RPS6P62753 249 aaKnown RBP13.79□□□□□ -0.2
NIP7-201ENST00000254940 PLCB2Q00722 1185 aa13.79□□□□□ -0.2
NIP7-201ENST00000254940 STK38Q15208 465 aa13.79□□□□□ -0.2
NIP7-201ENST00000254940 C17orf99Q6UX52 265 aa13.79□□□□□ -0.2
NIP7-201ENST00000254940 BLIDQ8IZY5 108 aa13.79□□□□□ -0.2
NIP7-201ENST00000254940 TNMDQ9H2S6 317 aa13.79□□□□□ -0.2
NIP7-201ENST00000254940 PCDHA6Q9UN73 950 aa13.79□□□□□ -0.2
NIP7-201ENST00000254940 PCDHA8Q9Y5H6 950 aa13.79□□□□□ -0.2
NIP7-201ENST00000254940 MEIS2O14770 477 aa13.78□□□□□ -0.2
NIP7-201ENST00000254940 SORBS3O60504 671 aa13.78□□□□□ -0.2
NIP7-201ENST00000254940 BCRP11274 1271 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms