RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 Pabpc1lA2A5N3 607 aaKnown RBP18.29■□□□□ 0.52
Ubb-201ENSMUST00000019649 E030030I06RikJ3QML9 246 aa18.29■□□□□ 0.52
Ubb-201ENSMUST00000019649 Lnx1O70263 728 aa18.29■□□□□ 0.52
Ubb-201ENSMUST00000019649 Kcna1P16388 495 aa18.29■□□□□ 0.52
Ubb-201ENSMUST00000019649 Samd11Q1RNF8 542 aa18.29■□□□□ 0.52
Ubb-201ENSMUST00000019649 Fsd1Q7TPM6 496 aa18.29■□□□□ 0.52
Ubb-201ENSMUST00000019649 Moxd2Q7TT41 619 aa18.29■□□□□ 0.52
Ubb-201ENSMUST00000019649 Usp6nlQ80XC3 819 aa18.29■□□□□ 0.52
Ubb-201ENSMUST00000019649 Fam126bQ8C729 530 aa18.29■□□□□ 0.52
Ubb-201ENSMUST00000019649 Kiaa1024Q8K3V7 917 aa18.29■□□□□ 0.52
Ubb-201ENSMUST00000019649 Vmn1r203Q8R273 311 aa18.29■□□□□ 0.52
Ubb-201ENSMUST00000019649 AW822073A0A0N4SUK1 652 aa18.28■□□□□ 0.52
Ubb-201ENSMUST00000019649 RarbP22605 482 aa18.28■□□□□ 0.52
Ubb-201ENSMUST00000019649 Rbp3P49194 1234 aa18.28■□□□□ 0.52
Ubb-201ENSMUST00000019649 Foxp1P58462 705 aa18.28■□□□□ 0.52
Ubb-201ENSMUST00000019649 Cct2P80314 535 aaKnown RBP18.28■□□□□ 0.52
Ubb-201ENSMUST00000019649 MycbpapQ5SUV2 932 aa18.28■□□□□ 0.52
Ubb-201ENSMUST00000019649 Cchcr1Q8K2I2 770 aa18.28■□□□□ 0.52
Ubb-201ENSMUST00000019649 Dcaf8Q8N7N5 591 aa18.28■□□□□ 0.52
Ubb-201ENSMUST00000019649 Adgrf4Q9D2L6 698 aa18.28■□□□□ 0.52
Ubb-201ENSMUST00000019649 Eif4enif1Q9EST3 983 aaKnown RBP18.28■□□□□ 0.52
Ubb-201ENSMUST00000019649 Nlrp5Q9R1M5 1163 aa18.28■□□□□ 0.52
Ubb-201ENSMUST00000019649 Smarce1O54941 411 aaKnown RBP18.27■□□□□ 0.52
Ubb-201ENSMUST00000019649 Nedd1P33215 660 aa18.27■□□□□ 0.52
Ubb-201ENSMUST00000019649 Limch1Q3UH68 1057 aa18.27■□□□□ 0.52
Ubb-201ENSMUST00000019649 Hoxa13Q62424 386 aa18.27■□□□□ 0.52
Ubb-201ENSMUST00000019649 Casc1Q6TDU8 730 aa18.27■□□□□ 0.52
Ubb-201ENSMUST00000019649 Msgn1Q9JK54 188 aa18.27■□□□□ 0.52
Ubb-201ENSMUST00000019649 Hic1Q9R1Y5 733 aa18.27■□□□□ 0.52
Ubb-201ENSMUST00000019649 Nlrc5C3VPR6 1915 aa18.27■□□□□ 0.52
Ubb-201ENSMUST00000019649 Fyb2A2A995 729 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Pfkfb3A7UAK5 555 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Cspp1B2RX88 1205 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Rfx1P48377 963 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 PRAG1Q571I4 1179 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Jakmip3Q5DTN8 844 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Prmt6Q6NZB1 378 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Mcph1Q7TT79 822 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Ppp1r10Q80W00 888 aaKnown RBP18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Ranbp6Q8BIV3 1105 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 RadxQ8C779 850 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Phtf2Q8CB19 747 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Alg3Q8K2A8 438 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Prpf3Q922U1 683 aaKnown RBP18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Rgs19Q9CX84 216 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 TbcbQ9D1E6 244 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Prom1O54990 867 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Meis2P97367 477 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Cep126Q0VBV7 1103 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Stk11ipQ3TAA7 1072 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Cep63Q3UPP8 700 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Mybpc2Q5XKE0 1136 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Tesk2Q8VCT9 570 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Ccdc7Q9D541 371 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Cul5Q9D5V5 780 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 GraspQ9JJA9 392 aa18.26■□□□□ 0.51
Ubb-201ENSMUST00000019649 Pik3r1P26450 724 aa18.25■□□□□ 0.51
Ubb-201ENSMUST00000019649 Aco1P28271 889 aaKnown RBP18.25■□□□□ 0.51
Ubb-201ENSMUST00000019649 EvcP57680 1005 aa18.25■□□□□ 0.51
Ubb-201ENSMUST00000019649 Gcnt1Q09324 428 aa18.25■□□□□ 0.51
Ubb-201ENSMUST00000019649 Nlrx1Q3TL44 975 aa18.25■□□□□ 0.51
Ubb-201ENSMUST00000019649 Ece1Q4PZA2 769 aa18.25■□□□□ 0.51
Ubb-201ENSMUST00000019649 Utp18Q5SSI6 552 aaKnown RBP18.25■□□□□ 0.51
Ubb-201ENSMUST00000019649 C2cd5Q7TPS5 1016 aaKnown RBP18.25■□□□□ 0.51
Ubb-201ENSMUST00000019649 Champ1Q8K327 802 aaKnown RBP18.25■□□□□ 0.51
Ubb-201ENSMUST00000019649 KinQ8K339 391 aa18.25■□□□□ 0.51
Ubb-201ENSMUST00000019649 CerkQ8K4Q7 531 aa18.25■□□□□ 0.51
Ubb-201ENSMUST00000019649 Acat1Q8QZT1 424 aa18.25■□□□□ 0.51
Ubb-201ENSMUST00000019649 Rufy2Q8R4C2 606 aa18.25■□□□□ 0.51
Ubb-201ENSMUST00000019649 Tubb6Q922F4 447 aa18.25■□□□□ 0.51
Ubb-201ENSMUST00000019649 Capn10Q9ESK3 666 aa18.25■□□□□ 0.51
Ubb-201ENSMUST00000019649 Sel1lQ9Z2G6 790 aa18.25■□□□□ 0.51
Ubb-201ENSMUST00000019649 Arhgap4B1AUY3 965 aa18.24■□□□□ 0.51
Ubb-201ENSMUST00000019649 Gm20425E9Q035 978 aaKnown RBP18.24■□□□□ 0.51
Ubb-201ENSMUST00000019649 Tmem265E9Q8G3 109 aa18.24■□□□□ 0.51
Ubb-201ENSMUST00000019649 Guca2bO09051 106 aa18.24■□□□□ 0.51
Ubb-201ENSMUST00000019649 SrprbP47758 269 aa18.24■□□□□ 0.51
Ubb-201ENSMUST00000019649 Nap1l2P51860 460 aa18.24■□□□□ 0.51
Ubb-201ENSMUST00000019649 StamP70297 548 aa18.24■□□□□ 0.51
Ubb-201ENSMUST00000019649 Cplx2P84086 134 aa18.24■□□□□ 0.51
Ubb-201ENSMUST00000019649 A1cfQ5YD48 595 aa18.24■□□□□ 0.51
Ubb-201ENSMUST00000019649 Smarcc2Q6PDG5 1213 aa18.24■□□□□ 0.51
Ubb-201ENSMUST00000019649 Gpc2Q8BKV1 579 aa18.24■□□□□ 0.51
Ubb-201ENSMUST00000019649 Btbd7Q8CFE5 1130 aa18.24■□□□□ 0.51
Ubb-201ENSMUST00000019649 GneQ91WG8 722 aaKnown RBP18.24■□□□□ 0.51
Ubb-201ENSMUST00000019649 Rufy3Q9D394 469 aa18.24■□□□□ 0.51
Ubb-201ENSMUST00000019649 Dhx8A2A4P0 1244 aaKnown RBP18.23■□□□□ 0.51
Ubb-201ENSMUST00000019649 Oip5A2AQ14 241 aa18.23■□□□□ 0.51
Ubb-201ENSMUST00000019649 Zscan20B2KFW1 1030 aa18.23■□□□□ 0.51
Ubb-201ENSMUST00000019649 Yars2Q8BYL4 472 aaKnown RBP18.23■□□□□ 0.51
Ubb-201ENSMUST00000019649 Anapc4Q91W96 807 aa18.23■□□□□ 0.51
Ubb-201ENSMUST00000019649 Pcdhgc5Q91XW9 944 aa18.23■□□□□ 0.51
Ubb-201ENSMUST00000019649 Vwa5aQ99KC8 793 aaKnown RBP18.23■□□□□ 0.51
Ubb-201ENSMUST00000019649 Tob2Q9JM55 345 aa18.23■□□□□ 0.51
Ubb-201ENSMUST00000019649 PolkQ9QUG2 852 aa18.23■□□□□ 0.51
Ubb-201ENSMUST00000019649 Ggps1Q9WTN0 300 aa18.23■□□□□ 0.51
Ubb-201ENSMUST00000019649 Stk39Q9Z1W9 556 aa18.23■□□□□ 0.51
Ubb-201ENSMUST00000019649 Casq1O09165 405 aa18.22■□□□□ 0.51
Ubb-201ENSMUST00000019649 SfnO70456 248 aaKnown RBP18.22■□□□□ 0.51
Ubb-201ENSMUST00000019649 MycP01108 439 aa18.22■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms