RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Prr14lE9Q7C4 1971 aa16.71■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Map7d1A2AJI0 846 aa16.71■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Rabgap1A2AWA9 1064 aa16.71■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Skint7A7XV04 395 aa16.71■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Cdh15P33146 784 aa16.71■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Cdc25aP48964 514 aa16.71■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Adamts10P58459 1104 aa16.71■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Ecm1Q61508 559 aa16.71■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Nap1l4Q78ZA7 375 aaKnown RBP16.71■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Pgm5Q8BZF8 567 aa16.71■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Trim29Q8R2Q0 587 aa16.71■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Krt34Q9D646 392 aa16.71■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Calml3Q9D6P8 149 aa16.71■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Znhit2Q9QY66 399 aa16.71■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Lypla2Q9WTL7 231 aa16.71■□□□□ 0.27
Ercc1-201ENSMUST00000003645 Gcnt4E9Q649 455 aa16.7■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Kif3aP28741 701 aa16.7■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Ube2hP62257 183 aa16.7■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Nbr1P97432 988 aa16.7■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Zdhhc15Q8BGJ0 337 aa16.7■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Gga3Q8BMI3 718 aa16.7■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Hsdl1Q8BTX9 330 aa16.7■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Yars2Q8BYL4 472 aaKnown RBP16.7■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Rhobtb2Q91V93 728 aa16.7■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Rassf3Q99P51 232 aa16.7■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Npm3Q9CPP0 175 aaKnown RBP16.7■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Dnajc19Q9CQV7 116 aa16.7■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Alpk1Q9CXB8 1231 aa16.7■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Tfr2Q9JKX3 798 aa16.7■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Gm5737A0A140LI11 423 aa16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Oip5A2AQ14 241 aa16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Rsbn1lD3Z0K6 821 aa16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Slc39a2G3X943 309 aa16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 SpibO35906 267 aa16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Pou2f2Q00196 463 aa16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Gtf3c3Q3TMP1 882 aa16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Kcnj11Q61743 390 aa16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Ccdc189Q6NZQ0 333 aa16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Pcdhb14Q6PB90 796 aa16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Haus7Q8BKT8 364 aa16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Nup88Q8CEC0 753 aaKnown RBP16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 GlyctkQ8QZY2 523 aa16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Ctu1Q99J10 420 aa16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Krt23Q99PS0 422 aa16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Ndufa8Q9DCJ5 172 aa16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Ccnt1Q9QWV9 724 aaKnown RBP16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Acot9Q9R0X4 439 aaKnown RBP16.69■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Sbf2E9PXF8 1872 aa16.68■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Pgap3A2A559 320 aa16.68■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Lrrc32G3XA59 663 aa16.68■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Itgb5O70309 798 aa16.68■□□□□ 0.26
Ercc1-201ENSMUST00000003645 MyocO70624 490 aa16.68■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Mpp3O88910 568 aa16.68■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Grin1P35438 938 aa16.68■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Cyp4f37Q3V1F1 546 aa16.68■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Naa30Q8CES0 364 aa16.68■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Sh2b2Q9JID9 621 aa16.68■□□□□ 0.26
Ercc1-201ENSMUST00000003645 AdnpQ9Z103 1108 aaKnown RBP16.68■□□□□ 0.26
Ercc1-201ENSMUST00000003645 1700113H08RikE9Q9Q5 327 aa16.67■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Hmgcs2P54869 508 aa16.67■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Gtf2f1Q3THK3 508 aaKnown RBP16.67■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Gm1587Q3UT80 123 aa16.67■□□□□ 0.26
Ercc1-201ENSMUST00000003645 C87499Q3UX49 493 aa16.67■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Wdr24Q8CFJ9 790 aa16.67■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Kcnv2Q8CFS6 562 aa16.67■□□□□ 0.26
Ercc1-201ENSMUST00000003645 CrygnQ8VHL5 183 aa16.67■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Mmtag2Q99LX5 260 aaKnown RBP16.67■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Cd274Q9EP73 290 aa16.67■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Sertad1Q9JL10 236 aa16.67■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Mkrn1Q9QXP6 481 aa16.67■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Pik3r1P26450 724 aa16.66■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Nr5a1P33242 462 aa16.66■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Eepd1Q3TGW2 569 aa16.66■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Tmem109Q3UBX0 243 aa16.66■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Prl2c1Q5SVL9 228 aa16.66■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Grik5Q61626 979 aa16.66■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Atp1a3Q6PIC6 1013 aa16.66■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Lrrd1Q8C0R9 853 aa16.66■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Ago4Q8CJF8 861 aa16.66■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Pabpc6Q9D4E6 643 aaKnown RBP16.66■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Vav3Q9R0C8 847 aa16.66■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Syt5Q9R0N5 386 aa16.66■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Zbtb22Q9Z0G7 638 aa16.66■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Tulp1Q9Z273 543 aa16.66■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Gm43638A0A0J9YU36 694 aa16.65■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Trim5E9PV98 497 aa16.65■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Pcif1P59114 706 aa16.65■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Adamts19P59509 1210 aa16.65■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Rnf157Q3TEL6 685 aa16.65■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Meis1Q60954 390 aa16.65■□□□□ 0.26
Ercc1-201ENSMUST00000003645 P2ry10Q8BFU7 328 aa16.65■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Nipa1Q8BHK1 323 aa16.65■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Cep85Q8BMK0 761 aa16.65■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Hps3Q91VB4 1002 aa16.65■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Scrn1Q9CZC8 414 aa16.65■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Mrps25Q9D125 171 aaKnown RBP16.65■□□□□ 0.26
Ercc1-201ENSMUST00000003645 MsraQ9D6Y7 233 aa16.65■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Lmbr1Q9JIT0 490 aa16.65■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Ttc6G3UYY4 1857 aa16.65■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Zgrf1Q0VGT4 1863 aa16.65■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms