RNA–Protein interactions for RNA: YOR329C

SCD5, Transcript of Protein required for normal actin organization and endocytosis, yeastyeast

Gene SCD5, Length 2,619 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD5YOR329C RCO1Q04779 684 aa2.31□□□□□ -2.04
SCD5YOR329C GMC2Q06201 188 aa2.31□□□□□ -2.04
SCD5YOR329C ICT1Q12385 394 aa2.31□□□□□ -2.04
SCD5YOR329C YMR030W-AQ3E760 96 aa2.31□□□□□ -2.04
SCD5YOR329C YCL012CQ8J0M4 134 aa2.31□□□□□ -2.04
SCD5YOR329C VPS13Q07878 3144 aa2.3□□□□□ -2.04
SCD5YOR329C STE3P06783 470 aa2.3□□□□□ -2.04
SCD5YOR329C NSP1P14907 823 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C EPT1P22140 391 aa2.3□□□□□ -2.04
SCD5YOR329C PUP3P25451 205 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C BUB2P26448 306 aaPredicted RBP2.3□□□□□ -2.04
SCD5YOR329C RAD14P28519 371 aa2.3□□□□□ -2.04
SCD5YOR329C ZIP1P31111 875 aa2.3□□□□□ -2.04
SCD5YOR329C APE2P32454 952 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C YBR056WP38081 501 aa2.3□□□□□ -2.04
SCD5YOR329C SIF2P38262 535 aa2.3□□□□□ -2.04
SCD5YOR329C IML3P38265 245 aa2.3□□□□□ -2.04
SCD5YOR329C YHR020WP38708 688 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C YHL008CP38750 627 aa2.3□□□□□ -2.04
SCD5YOR329C SEC31P38968 1273 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C MPT5P39016 859 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
SCD5YOR329C YIR016WP40572 265 aa2.3□□□□□ -2.04
SCD5YOR329C CHS6P40955 746 aa2.3□□□□□ -2.04
SCD5YOR329C MAF1P41910 395 aa2.3□□□□□ -2.04
SCD5YOR329C YFL012WP43580 148 aa2.3□□□□□ -2.04
SCD5YOR329C UBP6P43593 499 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C TRM112P53738 135 aaPredicted RBP2.3□□□□□ -2.04
SCD5YOR329C OSH6Q02201 448 aa2.3□□□□□ -2.04
SCD5YOR329C EFR3Q03653 782 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C ARG7Q04728 441 aa2.3□□□□□ -2.04
SCD5YOR329C DYN3Q04949 312 aa2.3□□□□□ -2.04
SCD5YOR329C YMR034CQ05131 434 aaPredicted RBP2.3□□□□□ -2.04
SCD5YOR329C YCS4Q06156 1176 aa2.3□□□□□ -2.04
SCD5YOR329C ATG17Q06410 417 aa2.3□□□□□ -2.04
SCD5YOR329C VAM6Q07468 1049 aa2.3□□□□□ -2.04
SCD5YOR329C NMD4Q12129 218 aa2.3□□□□□ -2.04
SCD5YOR329C RMD5Q12508 421 aa2.3□□□□□ -2.04
SCD5YOR329C RPS4AP0CX35 261 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C RPS4BP0CX36 261 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C RAP1P11938 827 aa2.3□□□□□ -2.04
SCD5YOR329C FBA1P14540 359 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C TAL1P15019 335 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C REC107P21651 314 aa2.3□□□□□ -2.04
SCD5YOR329C VAN1P23642 535 aa2.3□□□□□ -2.04
SCD5YOR329C RVS161P25343 265 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C DMC1P25453 334 aa2.3□□□□□ -2.04
SCD5YOR329C BEM1P29366 551 aa2.3□□□□□ -2.04
SCD5YOR329C AAR2P32357 355 aaPredicted RBP2.3□□□□□ -2.04
SCD5YOR329C AIM26P32858 118 aa2.3□□□□□ -2.04
SCD5YOR329C CBF5P33322 483 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
SCD5YOR329C ASK1P35734 292 aa2.3□□□□□ -2.04
SCD5YOR329C ROT2P38138 954 aa2.3□□□□□ -2.04
SCD5YOR329C BMT2P38278 337 aa2.3□□□□□ -2.04
SCD5YOR329C MED8P38304 223 aa2.3□□□□□ -2.04
SCD5YOR329C YHR112CP38716 378 aa2.3□□□□□ -2.04
SCD5YOR329C GND1P38720 489 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C PEX18P38855 283 aa2.3□□□□□ -2.04
SCD5YOR329C SHU2P38957 223 aa2.3□□□□□ -2.04
SCD5YOR329C NPT1P39683 429 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C ECM1P39715 212 aa2.3□□□□□ -2.04
SCD5YOR329C NDE1P40215 560 aa2.3□□□□□ -2.04
SCD5YOR329C GVP36P40531 326 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C FAF1P40546 346 aaPredicted RBP2.3□□□□□ -2.04
SCD5YOR329C SEC26P41810 973 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C PSA1P41940 361 aaKnown RBP2.3□□□□□ -2.04
SCD5YOR329C BIR1P47134 954 aa2.3□□□□□ -2.04
SCD5YOR329C YJR149WP47177 404 aa2.3□□□□□ -2.04
SCD5YOR329C MNT2P53059 558 aa2.3□□□□□ -2.04
SCD5YOR329C USE1P53146 245 aa2.3□□□□□ -2.04
SCD5YOR329C GET1P53192 235 aa2.3□□□□□ -2.04
SCD5YOR329C YNR068CP53754 272 aa2.3□□□□□ -2.04
SCD5YOR329C YNL095CP53932 642 aa2.3□□□□□ -2.04
SCD5YOR329C PNG1Q02890 363 aa2.3□□□□□ -2.04
SCD5YOR329C PIR1Q03178 341 aa2.3□□□□□ -2.04
SCD5YOR329C ACL4Q03771 387 aa2.3□□□□□ -2.04
SCD5YOR329C SPC2Q04969 178 aa2.3□□□□□ -2.04
SCD5YOR329C HPF1Q05164 967 aa2.3□□□□□ -2.04
SCD5YOR329C YPR202WQ08993 238 aa2.3□□□□□ -2.04
SCD5YOR329C ATG29Q12092 213 aa2.3□□□□□ -2.04
SCD5YOR329C SEC39Q12745 709 aa2.3□□□□□ -2.04
SCD5YOR329C ADF1Q2V2Q1 113 aa2.3□□□□□ -2.04
SCD5YOR329C THP2O13539 261 aaKnown RBP2.29□□□□□ -2.04
SCD5YOR329C ATP2P00830 511 aaKnown RBP2.29□□□□□ -2.04
SCD5YOR329C HIS5P07172 385 aa2.29□□□□□ -2.04
SCD5YOR329C BCY1P07278 416 aaKnown RBP2.29□□□□□ -2.04
SCD5YOR329C ERG20P08524 352 aaKnown RBP2.29□□□□□ -2.04
SCD5YOR329C COS2P0CX12 379 aa2.29□□□□□ -2.04
SCD5YOR329C COS3P0CX13 379 aa2.29□□□□□ -2.04
SCD5YOR329C YAR066WP0CX18 203 aa2.29□□□□□ -2.04
SCD5YOR329C YHR214WP0CX19 203 aa2.29□□□□□ -2.04
SCD5YOR329C FUS1P11710 512 aa2.29□□□□□ -2.04
SCD5YOR329C GCD2P12754 651 aaPredicted RBP2.29□□□□□ -2.04
SCD5YOR329C ARF2P19146 181 aaKnown RBP2.29□□□□□ -2.04
SCD5YOR329C SEC14P24280 304 aaKnown RBP2.29□□□□□ -2.04
SCD5YOR329C OCA4P25366 362 aa2.29□□□□□ -2.04
SCD5YOR329C YCR099CP25657 155 aa2.29□□□□□ -2.04
SCD5YOR329C YJU3P28321 313 aa2.29□□□□□ -2.04
SCD5YOR329C CTS1P29029 562 aa2.29□□□□□ -2.04
SCD5YOR329C GUT1P32190 709 aa2.29□□□□□ -2.04
SCD5YOR329C DGR2P32330 852 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms