RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSH1	YLR277C	BDS1	Q08347	646 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	HRK1	Q08732	759 aa	Known RBP	4.08	□□□□□ -1.76
YSH1	YLR277C	RAX1	Q08760	435 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	MLH3	Q12083	715 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	BAG7	Q12128	409 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	DCN1	Q12395	269 aa		4.08	□□□□□ -1.76
YSH1	YLR277C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
YSH1	YLR277C	RAD1	P06777	1100 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	GPA1	P08539	472 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	CLN2	P20438	545 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	DBR1	P24309	405 aa	Known RBP	4.07	□□□□□ -1.76
YSH1	YLR277C	PEP3	P27801	918 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	PMT2	P31382	759 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	NDI1	P32340	513 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	ERG3	P32353	365 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	MKS1	P34072	584 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	CDS1	P38221	457 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	CCT4	P39078	528 aa	Known RBP	4.07	□□□□□ -1.76
YSH1	YLR277C	NTA1	P40354	457 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	QDR1	P40475	563 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	VHR1	P40522	640 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	LCB2	P40970	561 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	VMA13	P41807	478 aa	Known RBP	4.07	□□□□□ -1.76
YSH1	YLR277C	PSA1	P41940	361 aa	Known RBP	4.07	□□□□□ -1.76
YSH1	YLR277C	GSM1	P42950	618 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	YFL034W	P43564	1073 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	YFR018C	P43599	363 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	NBP35	P52920	328 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	COG1	P53079	417 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	SHY1	P53266	389 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	SSU72	P53538	206 aa	Predicted RBP	4.07	□□□□□ -1.76
YSH1	YLR277C	CAF40	P53829	373 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	YDR476C	Q03362	224 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	YMR027W	Q04371	470 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	THI7	Q05998	598 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	OPT2	Q06593	877 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	PUN1	Q06991	263 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	YEH1	Q07804	573 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	PML1	Q07930	204 aa	Predicted RBP	4.07	□□□□□ -1.76
YSH1	YLR277C	YPL272C	Q08984	517 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	AI5_BETA	Q9ZZX0	354 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	SEM1	O94742	89 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	ADE5,7	P07244	802 aa	Known RBP	4.07	□□□□□ -1.76
YSH1	YLR277C	SSA3	P09435	649 aa	Known RBP	4.07	□□□□□ -1.76
YSH1	YLR277C	RNR2	P09938	399 aa	Known RBP	4.07	□□□□□ -1.76
YSH1	YLR277C	HMG2	P12684	1045 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	GFA1	P14742	717 aa	Known RBP	4.07	□□□□□ -1.76
YSH1	YLR277C	HOP1	P20050	605 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	CMK2	P22517	447 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	GPI10	P30777	616 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	IRE1	P32361	1115 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	CDC13	P32797	924 aa	Known RBP	4.07	□□□□□ -1.76
YSH1	YLR277C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
YSH1	YLR277C	YBR062C	P38239	180 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	THI12	P42883	340 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	AAD14	P42884	376 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	THI5	P43534	340 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	UBP6	P43593	499 aa	Known RBP	4.07	□□□□□ -1.76
YSH1	YLR277C	CCC1	P47818	322 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	NSA1	P53136	463 aa	Predicted RBP	4.07	□□□□□ -1.76
YSH1	YLR277C	VOA1	P53262	265 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	YGR117C	P53270	476 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	VPS62	P53285	467 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	CWC24	P53769	259 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	DIA1	P54005	336 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	NGL2	Q03264	515 aa	Known RBP	4.07	□□□□□ -1.76
YSH1	YLR277C	RMT2	Q03305	412 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	SKY1	Q03656	742 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	YDR249C	Q03787	373 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	YAP6	Q03935	383 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	CIA1	Q05583	330 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	VTA1	Q06263	330 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	THI13	Q07748	340 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	UAF30	Q08747	228 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	FRE3	Q08905	711 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	FYV7	Q12247	151 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	INP53	Q12271	1107 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	PCD1	Q12524	340 aa		4.07	□□□□□ -1.76
YSH1	YLR277C	PNO1	Q99216	274 aa	Known RBP	4.07	□□□□□ -1.76
YSH1	YLR277C	DST1	P07273	309 aa		4.06	□□□□□ -1.76
YSH1	YLR277C	SAM1	P10659	382 aa	Known RBP	4.06	□□□□□ -1.76
YSH1	YLR277C	PRI2	P20457	528 aa		4.06	□□□□□ -1.76
YSH1	YLR277C	PPH22	P23595	377 aa		4.06	□□□□□ -1.76
YSH1	YLR277C	CIN8	P27895	1000 aa		4.06	□□□□□ -1.76
YSH1	YLR277C	PYC2	P32327	1180 aa	Known RBP	4.06	□□□□□ -1.76
YSH1	YLR277C	SSE2	P32590	693 aa	Known RBP	4.06	□□□□□ -1.76
YSH1	YLR277C	LHP1	P33399	275 aa	Known RBP	4.06	□□□□□ -1.76
YSH1	YLR277C	RPF2	P36160	344 aa	Known RBP	4.06	□□□□□ -1.76
YSH1	YLR277C	ECM13	P38195	257 aa		4.06	□□□□□ -1.76
YSH1	YLR277C	NVJ1	P38881	321 aa		4.06	□□□□□ -1.76
YSH1	YLR277C	ACA1	P39970	489 aa		4.06	□□□□□ -1.76
YSH1	YLR277C	RPN3	P40016	523 aa	Known RBP	4.06	□□□□□ -1.76
YSH1	YLR277C	ICP55	P40051	511 aa		4.06	□□□□□ -1.76
YSH1	YLR277C	CSM2	P40465	213 aa		4.06	□□□□□ -1.76
YSH1	YLR277C	DOT5	P40553	215 aa		4.06	□□□□□ -1.76
YSH1	YLR277C	OTU1	P43558	301 aa		4.06	□□□□□ -1.76
YSH1	YLR277C	SIP4	P46954	829 aa		4.06	□□□□□ -1.76
YSH1	YLR277C	LSC2	P53312	427 aa		4.06	□□□□□ -1.76
YSH1	YLR277C	CWC27	Q02770	301 aa		4.06	□□□□□ -1.76
YSH1	YLR277C	ARL3	Q02804	198 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 445.2 ms