RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 SNX1Q13596 522 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 CCDC57Q2TAC2 916 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 KRT71Q3SY84 523 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 CCDC170Q8IYT3 715 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 CCDC63Q8NA47 563 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 TRIM58Q8NG06 486 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 PARD3BQ8TEW8 1205 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 A0A087X0B3 334 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 EME2A4GXA9 379 aaPredicted RBP10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 FTCDO95954 541 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 FAM107AO95990 144 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 IRX1P78414 480 aaPredicted RBP10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 RASSF7Q02833 373 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 TRADDQ15628 312 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 CAPRIN2Q6IMN6 1127 aaKnown RBP10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 OSBPL9Q96SU4 736 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 SOS2Q07890 1332 aaPredicted RBP10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 ZC3H4Q9UPT8 1303 aaKnown RBP10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 LTN1O94822 1766 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 PPP1R3GB7ZBB8 358 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 DNM1LO00429 736 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 HOXB7P09629 217 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 PAPD7Q5XG87 772 aaKnown RBP10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 TMC4Q7Z404 712 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 TBC1D10CQ8IV04 446 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 CSGALNACT2Q8N6G5 542 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 UHMK1Q8TAS1 419 aaKnown RBP10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 KCNV2Q8TDN2 545 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 ATP6V1G3Q96LB4 118 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 GSDMAQ96QA5 445 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 METTL22Q9BUU2 404 aaPredicted RBP10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 BABAM1Q9NWV8 329 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 SNX12Q9UMY4 172 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 HYOU1Q9Y4L1 999 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 SRPRBQ9Y5M8 271 aaKnown RBP10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 DIAPH2O60879 1101 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 GLI1P08151 1106 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 STAT6P42226 847 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 IFNAR2P48551 515 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 SARSP49591 514 aaKnown RBP10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 RBBP5Q15291 538 aaKnown RBP10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 MB21D1Q8N884 522 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 NOC4LQ9BVI4 516 aaKnown RBP10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 ZNF233A6NK53 670 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 TMCO5BA8MYB1 307 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 MMP1P03956 469 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 CFAP221Q4G0U5 840 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 SPDYE1Q8NFV5 336 aaPredicted RBP10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 TAF4BQ92750 862 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 ACTR5Q9H9F9 607 aaPredicted RBP10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 NOD2Q9HC29 1040 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 CD2APQ9Y5K6 639 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 C21orf2O43822 256 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 PRCPP42785 496 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 SCTRP47872 440 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 WTAPQ15007 396 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 THEMIS2Q5TEJ8 643 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 APTXQ7Z2E3 356 aaKnown RBP10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 SEC16BQ96JE7 1060 aa10.82□□□□□ -0.68
TNFAIP3-210ENST00000620204 EHHADHQ08426 723 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 PTGDRQ13258 359 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 FAM98CQ17RN3 349 aaKnown RBP10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 SPRED3Q2MJR0 410 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 CDKAL1Q5VV42 579 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 RRAGAQ7L523 313 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 DDX42Q86XP3 938 aaKnown RBP eCLIP10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 KSR1Q8IVT5 923 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 MDM1Q8TC05 714 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 DYDC1Q8WWB3 177 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 APPBP2Q92624 585 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 NLRC4Q9NPP4 1024 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 PSMA7O14818 248 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 CTNND1O60716 968 aaKnown RBP10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 SNRPA1P09661 255 aaKnown RBP10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 TCP1P17987 556 aaKnown RBP10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 IL15P40933 162 aaPredicted RBP10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 SSR1P43307 286 aaKnown RBP10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 SCARF1Q14162 830 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 QPCTQ16769 361 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 ANKS4BQ8N8V4 417 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 LMBR1Q8WVP7 490 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 XAGE2Q96GT9 111 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 SPAG5Q96R06 1193 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 V9GY48 417 aaPredicted RBP10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 PCDH11XQ9BZA7 1347 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 PCDH11YQ9BZA8 1340 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 STRCP1A6NGW2 1772 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 PSMD2Q13200 908 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 CREG2Q8IUH2 290 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 NKX2-3Q8TAU0 364 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 NLRP3Q96P20 1036 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 TUBGCP2Q9BSJ2 902 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 OSBPL7Q9BZF2 842 aa10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 A1CFQ9NQ94 594 aaKnown RBP10.81□□□□□ -0.68
TNFAIP3-210ENST00000620204 MEGF6O75095 1541 aa10.8□□□□□ -0.68
TNFAIP3-210ENST00000620204 SH2B2O14492 632 aaPredicted RBP10.8□□□□□ -0.68
TNFAIP3-210ENST00000620204 RASSF9O75901 435 aa10.8□□□□□ -0.68
TNFAIP3-210ENST00000620204 ANP32DO95626 131 aa10.8□□□□□ -0.68
TNFAIP3-210ENST00000620204 SKOR1P84550 965 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms