RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 TARSL2A2RTX5 802 aaKnown RBP16.13■□□□□ 0.17
VPS36-207ENST00000611132 HMGB1P1B2RPK0 211 aaPredicted RBP16.13■□□□□ 0.17
VPS36-207ENST00000611132 HLA-DOAP06340 250 aa16.13■□□□□ 0.17
VPS36-207ENST00000611132 NR1I3Q14994 352 aa16.13■□□□□ 0.17
VPS36-207ENST00000611132 PTPROQ16827 1216 aa16.13■□□□□ 0.17
VPS36-207ENST00000611132 ARMC9Q7Z3E5 817 aa16.13■□□□□ 0.17
VPS36-207ENST00000611132 CCDC197Q8NCU1 140 aa16.13■□□□□ 0.17
VPS36-207ENST00000611132 PPFIBP2Q8ND30 876 aa16.13■□□□□ 0.17
VPS36-207ENST00000611132 EHMT1Q9H9B1 1298 aa16.13■□□□□ 0.17
VPS36-207ENST00000611132 HOMER3Q9NSC5 361 aa16.13■□□□□ 0.17
VPS36-207ENST00000611132 PRPF3O43395 683 aaKnown RBP16.13■□□□□ 0.17
VPS36-207ENST00000611132 SF3B2Q13435 895 aaKnown RBP16.13■□□□□ 0.17
VPS36-207ENST00000611132 MAN2A1Q16706 1144 aa16.13■□□□□ 0.17
VPS36-207ENST00000611132 PARP10Q53GL7 1025 aa16.13■□□□□ 0.17
VPS36-207ENST00000611132 NBPF5PQ86XG9 351 aaPredicted RBP16.13■□□□□ 0.17
VPS36-207ENST00000611132 TACO1Q9BSH4 297 aaKnown RBP16.13■□□□□ 0.17
VPS36-207ENST00000611132 NFU1Q9UMS0 254 aa16.13■□□□□ 0.17
VPS36-207ENST00000611132 TTC26A0AVF1 554 aa16.13■□□□□ 0.17
VPS36-207ENST00000611132 CEP83Q9Y592 693 aa16.13■□□□□ 0.17
VPS36-207ENST00000611132 SMCO2A6NFE2 343 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 BCAMP50895 628 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 GALNT17Q6IS24 598 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 TBC1D31Q96DN5 1066 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 STRBPQ96SI9 672 aaKnown RBP16.12■□□□□ 0.17
VPS36-207ENST00000611132 NCAPD2Q15021 1401 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 CCDC169A6NNP5 214 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 PRKAB2O43741 272 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 CALUO43852 315 aaPredicted RBP16.12■□□□□ 0.17
VPS36-207ENST00000611132 CUL4BQ13620 913 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 A2ML1A8K2U0 1454 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 MROH7-TTC4A0A0A0MT08 1334 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 PCP11498 1178 aaKnown RBP16.12■□□□□ 0.17
VPS36-207ENST00000611132 CTTNBP2NLQ9P2B4 639 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 DLC1Q96QB1 1528 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 H2AFZP0C0S5 128 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 GLE1Q53GS7 698 aaKnown RBP16.12■□□□□ 0.17
VPS36-207ENST00000611132 H2AFVQ71UI9 128 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 PNMA1Q8ND90 353 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 LRRN4CLQ8ND94 238 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 NCAPGQ9BPX3 1015 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 SUGCTQ9HAC7 445 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 PIH1D3Q9NQM4 214 aaKnown RBP16.12■□□□□ 0.17
VPS36-207ENST00000611132 PARP2Q9UGN5 583 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 STK38LQ9Y2H1 464 aa16.12■□□□□ 0.17
VPS36-207ENST00000611132 ATP1A1P05023 1023 aaKnown RBP16.11■□□□□ 0.17
VPS36-207ENST00000611132 PLCG2P16885 1265 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 TSNAXIP1Q2TAA8 658 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 BEND6Q5SZJ8 279 aaPredicted RBP16.11■□□□□ 0.17
VPS36-207ENST00000611132 TRMT1LQ7Z2T5 733 aaKnown RBP16.11■□□□□ 0.17
VPS36-207ENST00000611132 U2AF1L4Q8WU68 220 aaKnown RBP16.11■□□□□ 0.17
VPS36-207ENST00000611132 NEXMIFQ5QGS0 1516 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 C6orf229H3BNL8 230 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 RPSAP08865 295 aaKnown RBP16.11■□□□□ 0.17
VPS36-207ENST00000611132 HAUS3Q68CZ6 603 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 CCDC105Q8IYK2 499 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 N4BP2L2Q92802 583 aaPredicted RBP16.11■□□□□ 0.17
VPS36-207ENST00000611132 IL17RAQ96F46 866 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 IQCGQ9H095 443 aaKnown RBP16.11■□□□□ 0.17
VPS36-207ENST00000611132 ADD3Q9UEY8 706 aaKnown RBP16.11■□□□□ 0.17
VPS36-207ENST00000611132 FRMD4BQ9Y2L6 1034 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 SPDYE3A6NKU9 549 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 LAD1O00515 517 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 N4BP1O75113 896 aaKnown RBP16.11■□□□□ 0.17
VPS36-207ENST00000611132 FTCDO95954 541 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 HIBADHP31937 336 aaKnown RBP16.11■□□□□ 0.17
VPS36-207ENST00000611132 NEK8Q86SG6 692 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 LY9Q9HBG7 655 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 MCAMP43121 646 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 ADCY7P51828 1080 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 ARL6IP4Q66PJ3 421 aaKnown RBP16.11■□□□□ 0.17
VPS36-207ENST00000611132 MGARPQ8TDB4 240 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 OXER1Q8TDS5 423 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 RPGRQ92834 1020 aaKnown RBP16.11■□□□□ 0.17
VPS36-207ENST00000611132 ANKRD2Q9GZV1 360 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 ARPP21Q9UBL0 812 aaPredicted RBP16.11■□□□□ 0.17
VPS36-207ENST00000611132 ASIC3Q9UHC3 531 aa16.11■□□□□ 0.17
VPS36-207ENST00000611132 FBXO2Q9UK22 296 aaPredicted RBP16.11■□□□□ 0.17
VPS36-207ENST00000611132 FXR1P51114 621 aaKnown RBP eCLIP16.1■□□□□ 0.17
VPS36-207ENST00000611132 TCP11Q8WWU5 503 aa16.1■□□□□ 0.17
VPS36-207ENST00000611132 CPS1P31327 1500 aa16.1■□□□□ 0.17
VPS36-207ENST00000611132 CORO7P57737 925 aa16.1■□□□□ 0.17
VPS36-207ENST00000611132 RASGRP4Q8TDF6 673 aa16.1■□□□□ 0.17
VPS36-207ENST00000611132 AK8Q96MA6 479 aa16.1■□□□□ 0.17
VPS36-207ENST00000611132 MMS19Q96T76 1030 aa16.1■□□□□ 0.17
VPS36-207ENST00000611132 ZNF446Q9NWS9 450 aa16.1■□□□□ 0.17
VPS36-207ENST00000611132 CHD1O14646 1710 aa16.1■□□□□ 0.17
VPS36-207ENST00000611132 NEDD4P46934 1319 aa16.1■□□□□ 0.17
VPS36-207ENST00000611132 FRMD3A2A2Y4 597 aa16.1■□□□□ 0.17
VPS36-207ENST00000611132 STAT1P42224 750 aa16.1■□□□□ 0.17
VPS36-207ENST00000611132 MXRA7P84157 204 aa16.1■□□□□ 0.17
VPS36-207ENST00000611132 LRCH2Q5VUJ6 765 aa16.1■□□□□ 0.17
VPS36-207ENST00000611132 SGMS1Q86VZ5 419 aa16.1■□□□□ 0.17
VPS36-207ENST00000611132 NOA1Q8NC60 698 aaKnown RBP16.1■□□□□ 0.17
VPS36-207ENST00000611132 SOS2Q07890 1332 aaPredicted RBP16.09■□□□□ 0.17
VPS36-207ENST00000611132 CTNND1O60716 968 aaKnown RBP16.09■□□□□ 0.17
VPS36-207ENST00000611132 HIP1RO75146 1068 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 RABL6Q3YEC7 729 aaPredicted RBP16.09■□□□□ 0.17
VPS36-207ENST00000611132 USP37Q86T82 979 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 LCORLQ8N3X6 602 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 PRM3Q9NNZ6 103 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms