RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 GOLGA6CA6NDK9 693 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 GIPC1O14908 333 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 GOLGA6DP0CG33 693 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 SCRN1Q12765 414 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 BSPRYQ5W0U4 402 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 CARD6Q9BX69 1037 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 GOLGA6AQ9NYA3 693 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 ZBTB24O43167 697 aaPredicted RBP17.17■□□□□ 0.34
TNXB-208ENST00000611016 PPFIA4O75335 1185 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 WHAMMP3Q1A5X7 153 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 KDM5CP41229 1560 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 ZNF577Q9BSK1 485 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 XPO4Q9C0E2 1151 aaKnown RBP17.17■□□□□ 0.34
TNXB-208ENST00000611016 ARAP3Q8WWN8 1544 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 GOLGA6BA6NDN3 693 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 GABPB1Q06547 395 aaPredicted RBP17.17■□□□□ 0.34
TNXB-208ENST00000611016 KRT81Q14533 505 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 GBP6Q6ZN66 633 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 SLC17A8Q8NDX2 589 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 GSDMBQ8TAX9 411 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 SYMPKQ92797 1274 aaKnown RBP17.17■□□□□ 0.34
TNXB-208ENST00000611016 KIAA1024Q9UPX6 916 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 MAGI2Q86UL8 1455 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 CCDC160A6NGH7 325 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.17■□□□□ 0.34
TNXB-208ENST00000611016 GRK7Q8WTQ7 553 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 SAMD9LQ8IVG5 1584 aa17.17■□□□□ 0.34
TNXB-208ENST00000611016 PRKAB2O43741 272 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 ADD2P35612 726 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 NEDD9Q14511 834 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 MIGA2Q7L4E1 593 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 KANSL2Q9H9L4 492 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 SERPINB13Q9UIV8 391 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 RNF123Q5XPI4 1314 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 I3L4J1 428 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 VCX3BQ9H321 246 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 CLIC4Q9Y696 253 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 RPN1P04843 607 aaKnown RBP17.16■□□□□ 0.34
TNXB-208ENST00000611016 MKRN3Q13064 507 aaKnown RBP17.16■□□□□ 0.34
TNXB-208ENST00000611016 ADAM9Q13443 819 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 ARHGEF6Q15052 776 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 ZNF827Q17R98 1081 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 LSG1Q9H089 658 aaKnown RBP17.16■□□□□ 0.34
TNXB-208ENST00000611016 AP5M1Q9H0R1 490 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 ERVK-7P63135 1459 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 NPR1P16066 1061 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 LCORLQ8N3X6 602 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 AMFRQ9UKV5 643 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 PRR36Q9H6K5 1346 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 GTPBP6O43824 516 aaPredicted RBP17.16■□□□□ 0.34
TNXB-208ENST00000611016 STAM2O75886 525 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 CMA1P23946 247 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 LONP1P36776 959 aaKnown RBP17.16■□□□□ 0.34
TNXB-208ENST00000611016 TFDP1Q14186 410 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 LONRF2Q1L5Z9 754 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 PI16Q6UXB8 463 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 TRIM58Q8NG06 486 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 POMGNT1Q8WZA1 660 aa17.16■□□□□ 0.34
TNXB-208ENST00000611016 CCDC62Q6P9F0 684 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 LMNTD2Q8IXW0 634 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 VCXQ9H320 206 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 HESX1Q9UBX0 185 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 AKT3Q9Y243 479 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 SUSD4Q5VX71 490 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 CEP57Q86XR8 500 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 MAP4K1Q92918 833 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 PCDHA4Q9UN74 947 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 GRAPQ13588 217 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 HHATQ5VTY9 493 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 KRBA2Q6ZNG9 492 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 TRIM50Q86XT4 487 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 PPM1KQ8N3J5 372 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 GRAPLQ8TC17 118 aaPredicted RBP17.15■□□□□ 0.34
TNXB-208ENST00000611016 RASGRP4Q8TDF6 673 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 GPR101Q96P66 508 aaPredicted RBP17.15■□□□□ 0.34
TNXB-208ENST00000611016 MMP10P09238 476 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 FAM26FQ5R3K3 315 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 ODR4Q5SWX8 454 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 RPS6KC1Q96S38 1066 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 MTMR6Q9Y217 621 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 MBD5Q9P267 1494 aa17.15■□□□□ 0.34
TNXB-208ENST00000611016 USP17L3A6NCW0 530 aa17.14■□□□□ 0.34
TNXB-208ENST00000611016 USP17L4A6NCW7 530 aa17.14■□□□□ 0.34
TNXB-208ENST00000611016 PDE6CP51160 858 aa17.14■□□□□ 0.34
TNXB-208ENST00000611016 USP17L1Q7RTZ2 530 aa17.14■□□□□ 0.34
TNXB-208ENST00000611016 PGBD1Q96JS3 809 aa17.14■□□□□ 0.34
TNXB-208ENST00000611016 PCDHA7Q9UN72 937 aa17.14■□□□□ 0.34
TNXB-208ENST00000611016 NDUFAB1O14561 156 aa17.14■□□□□ 0.33
TNXB-208ENST00000611016 BMP3P12645 472 aa17.14■□□□□ 0.33
TNXB-208ENST00000611016 SND1Q7KZF4 910 aaKnown RBP eCLIP17.14■□□□□ 0.33
TNXB-208ENST00000611016 RSAD2Q8WXG1 361 aa17.14■□□□□ 0.33
TNXB-208ENST00000611016 RAB20Q9NX57 234 aa17.14■□□□□ 0.33
TNXB-208ENST00000611016 NT5C2P49902 561 aa17.14■□□□□ 0.33
TNXB-208ENST00000611016 BRD3Q15059 726 aa17.14■□□□□ 0.33
TNXB-208ENST00000611016 CIAPIN1Q6FI81 312 aa17.14■□□□□ 0.33
TNXB-208ENST00000611016 GJA10Q969M2 543 aa17.14■□□□□ 0.33
TNXB-208ENST00000611016 RUNDC3BQ96NL0 473 aa17.14■□□□□ 0.33
TNXB-208ENST00000611016 METTL14Q9HCE5 456 aaKnown RBP17.14■□□□□ 0.33
TNXB-208ENST00000611016 SARNPP82979 210 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms