RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 KBTBD13C9JR72 458 aa22.52■■□□□ 1.2
TCF3-219ENST00000610756 NFIBO00712 420 aa22.52■■□□□ 1.2
TCF3-219ENST00000610756 SLC27A2O14975 620 aa22.52■■□□□ 1.2
TCF3-219ENST00000610756 CHST3Q7LGC8 479 aa22.52■■□□□ 1.2
TCF3-219ENST00000610756 KATNBL1Q9H079 304 aa22.52■■□□□ 1.2
TCF3-219ENST00000610756 MAD2L2Q9UI95 211 aa22.52■■□□□ 1.2
TCF3-219ENST00000610756 ZHX1Q9UKY1 873 aaPredicted RBP22.52■■□□□ 1.2
TCF3-219ENST00000610756 KLRF2D3W0D1 207 aa22.51■■□□□ 1.19
TCF3-219ENST00000610756 CDC45O75419 566 aa22.51■■□□□ 1.19
TCF3-219ENST00000610756 ANTXR2P58335 489 aa22.51■■□□□ 1.19
TCF3-219ENST00000610756 WTAPQ15007 396 aa22.51■■□□□ 1.19
TCF3-219ENST00000610756 CREB3L3Q68CJ9 461 aa22.51■■□□□ 1.19
TCF3-219ENST00000610756 RNF180Q86T96 592 aa22.51■■□□□ 1.19
TCF3-219ENST00000610756 STAG2Q8N3U4 1231 aa22.51■■□□□ 1.19
TCF3-219ENST00000610756 JMJD4Q9H9V9 463 aa22.51■■□□□ 1.19
TCF3-219ENST00000610756 PLXNA1Q9UIW2 1896 aa22.5■■□□□ 1.19
TCF3-219ENST00000610756 ASTN1O14525 1302 aa22.5■■□□□ 1.19
TCF3-219ENST00000610756 LOC102724159A0A0B4J2E5 919 aa22.5■■□□□ 1.19
TCF3-219ENST00000610756 DUSP11O75319 330 aaKnown RBP22.5■■□□□ 1.19
TCF3-219ENST00000610756 TROAPQ12815 778 aa22.5■■□□□ 1.19
TCF3-219ENST00000610756 PWP2Q15269 919 aaKnown RBP22.5■■□□□ 1.19
TCF3-219ENST00000610756 CDC37Q16543 378 aaPredicted RBP22.5■■□□□ 1.19
TCF3-219ENST00000610756 LRRC26Q2I0M4 334 aa22.5■■□□□ 1.19
TCF3-219ENST00000610756 CCDC144BQ3MJ40 725 aa22.5■■□□□ 1.19
TCF3-219ENST00000610756 TMEM67Q5HYA8 995 aa22.5■■□□□ 1.19
TCF3-219ENST00000610756 MORC4Q8TE76 937 aa22.5■■□□□ 1.19
TCF3-219ENST00000610756 SENP2Q9HC62 589 aa22.5■■□□□ 1.19
TCF3-219ENST00000610756 VAT1LQ9HCJ6 419 aa22.5■■□□□ 1.19
TCF3-219ENST00000610756 ADD3Q9UEY8 706 aaKnown RBP22.5■■□□□ 1.19
TCF3-219ENST00000610756 COLQQ9Y215 455 aaPredicted RBP22.5■■□□□ 1.19
TCF3-219ENST00000610756 DNAH12Q6ZR08 3092 aa22.49■■□□□ 1.19
TCF3-219ENST00000610756 PTPDC1A2A3K4 754 aa22.49■■□□□ 1.19
TCF3-219ENST00000610756 PGK1P00558 417 aa22.49■■□□□ 1.19
TCF3-219ENST00000610756 MCM5P33992 734 aa22.49■■□□□ 1.19
TCF3-219ENST00000610756 ERICH6BQ5W0A0 696 aa22.49■■□□□ 1.19
TCF3-219ENST00000610756 RNF207Q6ZRF8 634 aa22.49■■□□□ 1.19
TCF3-219ENST00000610756 C7orf61Q8IZ16 206 aa22.49■■□□□ 1.19
TCF3-219ENST00000610756 TMTC2Q8N394 836 aa22.49■■□□□ 1.19
TCF3-219ENST00000610756 PURBQ96QR8 312 aaKnown RBP22.49■■□□□ 1.19
TCF3-219ENST00000610756 ADAMTS4O75173 837 aa22.48■■□□□ 1.19
TCF3-219ENST00000610756 MYCNP04198 464 aaPredicted RBP22.48■■□□□ 1.19
TCF3-219ENST00000610756 ADCYAP1R1P41586 468 aa22.48■■□□□ 1.19
TCF3-219ENST00000610756 RPS6P62753 249 aaKnown RBP22.48■■□□□ 1.19
TCF3-219ENST00000610756 GRM4Q14833 912 aa22.48■■□□□ 1.19
TCF3-219ENST00000610756 QRICH1Q2TAL8 776 aa22.48■■□□□ 1.19
TCF3-219ENST00000610756 USH1GQ495M9 461 aa22.48■■□□□ 1.19
TCF3-219ENST00000610756 MTMR8Q96EF0 704 aa22.48■■□□□ 1.19
TCF3-219ENST00000610756 TSEN34Q9BSV6 310 aaKnown RBP22.48■■□□□ 1.19
TCF3-219ENST00000610756 ABCB11O95342 1321 aa22.47■■□□□ 1.19
TCF3-219ENST00000610756 SMCHD1A6NHR9 2005 aa22.47■■□□□ 1.19
TCF3-219ENST00000610756 DHX16O60231 1041 aaKnown RBP22.47■■□□□ 1.19
TCF3-219ENST00000610756 HABP4Q5JVS0 413 aaKnown RBP22.47■■□□□ 1.19
TCF3-219ENST00000610756 RNF20Q5VTR2 975 aa22.47■■□□□ 1.19
TCF3-219ENST00000610756 SLC39A5Q6ZMH5 540 aa22.47■■□□□ 1.19
TCF3-219ENST00000610756 CATIPQ7Z7H3 387 aa22.47■■□□□ 1.19
TCF3-219ENST00000610756 FBXO11Q86XK2 927 aa22.47■■□□□ 1.19
TCF3-219ENST00000610756 KLHDC9Q8NEP7 349 aa22.47■■□□□ 1.19
TCF3-219ENST00000610756 TMEM87BQ96K49 555 aa22.47■■□□□ 1.19
TCF3-219ENST00000610756 MAP3K14Q99558 947 aa22.47■■□□□ 1.19
TCF3-219ENST00000610756 PHF24Q9UPV7 400 aa22.47■■□□□ 1.19
TCF3-219ENST00000610756 PRC1O43663 620 aa22.46■■□□□ 1.19
TCF3-219ENST00000610756 CALML3P27482 149 aa22.46■■□□□ 1.19
TCF3-219ENST00000610756 ATN1P54259 1190 aaPredicted RBP22.46■■□□□ 1.19
TCF3-219ENST00000610756 TSGA10IPQ3SY00 556 aa22.46■■□□□ 1.19
TCF3-219ENST00000610756 C1orf53Q5VUE5 145 aa22.46■■□□□ 1.19
TCF3-219ENST00000610756 IQSEC1Q6DN90 963 aa22.46■■□□□ 1.19
TCF3-219ENST00000610756 DNERQ8NFT8 737 aa22.46■■□□□ 1.19
TCF3-219ENST00000610756 LENG1Q96BZ8 264 aaPredicted RBP22.46■■□□□ 1.19
TCF3-219ENST00000610756 RIOX1Q9H6W3 641 aa22.46■■□□□ 1.19
TCF3-219ENST00000610756 LY9Q9HBG7 655 aa22.46■■□□□ 1.19
TCF3-219ENST00000610756 MRPL11Q9Y3B7 192 aaKnown RBP22.46■■□□□ 1.19
TCF3-219ENST00000610756 SYNRGQ9UMZ2 1314 aa22.45■■□□□ 1.19
TCF3-219ENST00000610756 RANBP2P49792 3224 aaKnown RBP22.45■■□□□ 1.18
TCF3-219ENST00000610756 ADCY6O43306 1168 aa22.45■■□□□ 1.18
TCF3-219ENST00000610756 ALDH5A1P51649 535 aaPredicted RBP22.45■■□□□ 1.18
TCF3-219ENST00000610756 GJA9P57773 515 aa22.45■■□□□ 1.18
TCF3-219ENST00000610756 NKX3-2P78367 333 aa22.45■■□□□ 1.18
TCF3-219ENST00000610756 TNFAIP2Q03169 654 aa22.45■■□□□ 1.18
TCF3-219ENST00000610756 CCSAPQ6IQ19 270 aaPredicted RBP22.45■■□□□ 1.18
TCF3-219ENST00000610756 TAPT1Q6NXT6 567 aa22.45■■□□□ 1.18
TCF3-219ENST00000610756 CHRDL2Q6WN34 429 aa22.45■■□□□ 1.18
TCF3-219ENST00000610756 SLC30A10Q6XR72 485 aa22.45■■□□□ 1.18
TCF3-219ENST00000610756 MCF2L2Q86YR7 1114 aa22.45■■□□□ 1.18
TCF3-219ENST00000610756 AMNQ9BXJ7 453 aa22.45■■□□□ 1.18
TCF3-219ENST00000610756 PRO3102Q9H379 93 aa22.45■■□□□ 1.18
TCF3-219ENST00000610756 SPC25Q9HBM1 224 aa22.45■■□□□ 1.18
TCF3-219ENST00000610756 VTA1Q9NP79 307 aa22.45■■□□□ 1.18
TCF3-219ENST00000610756 PPP4R2Q9NY27 417 aa22.45■■□□□ 1.18
TCF3-219ENST00000610756 ZBTB5O15062 677 aa22.44■■□□□ 1.18
TCF3-219ENST00000610756 CST5P28325 142 aaPredicted RBP22.44■■□□□ 1.18
TCF3-219ENST00000610756 LIFRP42702 1097 aa22.44■■□□□ 1.18
TCF3-219ENST00000610756 SNX17Q15036 470 aa22.44■■□□□ 1.18
TCF3-219ENST00000610756 TBC1D5Q92609 795 aa22.44■■□□□ 1.18
TCF3-219ENST00000610756 FERMT2Q96AC1 680 aa22.44■■□□□ 1.18
TCF3-219ENST00000610756 UPF3AQ9H1J1 476 aaKnown RBP22.44■■□□□ 1.18
TCF3-219ENST00000610756 DDX49Q9Y6V7 483 aaKnown RBP22.44■■□□□ 1.18
TCF3-219ENST00000610756 FRMPD3Q5JV73 1810 aa22.43■■□□□ 1.18
TCF3-219ENST00000610756 TRAF1Q13077 416 aa22.43■■□□□ 1.18
TCF3-219ENST00000610756 COL9A3Q14050 684 aaPredicted RBP22.43■■□□□ 1.18
TCF3-219ENST00000610756 KCNA10Q16322 511 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms