RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 FBXO11Q86XK2 927 aa20.09■□□□□ 0.81
SHKBP1-212ENST00000596163 LRRC2Q9BYS8 371 aa20.09■□□□□ 0.81
SHKBP1-212ENST00000596163 CNPY2Q9Y2B0 182 aa20.09■□□□□ 0.81
SHKBP1-212ENST00000596163 ABCB11O95342 1321 aa20.08■□□□□ 0.81
SHKBP1-212ENST00000596163 HTTP42858 3142 aa20.08■□□□□ 0.81
SHKBP1-212ENST00000596163 CNGA1P29973 690 aa20.08■□□□□ 0.81
SHKBP1-212ENST00000596163 QRICH1Q2TAL8 776 aa20.08■□□□□ 0.81
SHKBP1-212ENST00000596163 MUM1L1Q5H9M0 696 aa20.08■□□□□ 0.81
SHKBP1-212ENST00000596163 RGS22Q8NE09 1264 aa20.08■□□□□ 0.81
SHKBP1-212ENST00000596163 AMNQ9BXJ7 453 aa20.08■□□□□ 0.81
SHKBP1-212ENST00000596163 RIOX1Q9H6W3 641 aa20.08■□□□□ 0.81
SHKBP1-212ENST00000596163 CYP39A1Q9NYL5 469 aa20.08■□□□□ 0.81
SHKBP1-212ENST00000596163 MRPL11Q9Y3B7 192 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-212ENST00000596163 SYNGAP1Q96PV0 1343 aa20.07■□□□□ 0.8
SHKBP1-212ENST00000596163 ZBTB5O15062 677 aa20.07■□□□□ 0.8
SHKBP1-212ENST00000596163 CCND3P30281 292 aaPredicted RBP20.07■□□□□ 0.8
SHKBP1-212ENST00000596163 USH1GQ495M9 461 aa20.07■□□□□ 0.8
SHKBP1-212ENST00000596163 MAMDC4Q6UXC1 1216 aa20.07■□□□□ 0.8
SHKBP1-212ENST00000596163 MCF2L2Q86YR7 1114 aa20.07■□□□□ 0.8
SHKBP1-212ENST00000596163 FAM133AQ8N9E0 248 aa20.07■□□□□ 0.8
SHKBP1-212ENST00000596163 MTMR8Q96EF0 704 aa20.07■□□□□ 0.8
SHKBP1-212ENST00000596163 CRISPLD2Q9H0B8 497 aa20.07■□□□□ 0.8
SHKBP1-212ENST00000596163 ADD3Q9UEY8 706 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-212ENST00000596163 PTPDC1A2A3K4 754 aa20.06■□□□□ 0.8
SHKBP1-212ENST00000596163 ASB14A6NK59 587 aa20.06■□□□□ 0.8
SHKBP1-212ENST00000596163 CYBAP13498 195 aa20.06■□□□□ 0.8
SHKBP1-212ENST00000596163 RNF207Q6ZRF8 634 aa20.06■□□□□ 0.8
SHKBP1-212ENST00000596163 ANKLE1Q8NAG6 615 aa20.06■□□□□ 0.8
SHKBP1-212ENST00000596163 FANCBQ8NB91 859 aa20.06■□□□□ 0.8
SHKBP1-212ENST00000596163 CLEC4DQ8WXI8 215 aa20.06■□□□□ 0.8
SHKBP1-212ENST00000596163 MPHOSPH6Q99547 160 aaKnown RBP20.06■□□□□ 0.8
SHKBP1-212ENST00000596163 MYL10Q9BUA6 226 aa20.06■□□□□ 0.8
SHKBP1-212ENST00000596163 PNMA6FA0A0J9YX94 578 aa20.05■□□□□ 0.8
SHKBP1-212ENST00000596163 NFIBO00712 420 aa20.05■□□□□ 0.8
SHKBP1-212ENST00000596163 SEPT4O43236 478 aa20.05■□□□□ 0.8
SHKBP1-212ENST00000596163 CASTP20810 708 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-212ENST00000596163 RPS6KB1P23443 525 aa20.05■□□□□ 0.8
SHKBP1-212ENST00000596163 BAATQ14032 418 aaPredicted RBP20.05■□□□□ 0.8
SHKBP1-212ENST00000596163 COL9A3Q14050 684 aaPredicted RBP20.05■□□□□ 0.8
SHKBP1-212ENST00000596163 RRP36Q96EU6 259 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-212ENST00000596163 TCEANC2Q96MN5 208 aa20.05■□□□□ 0.8
SHKBP1-212ENST00000596163 SPZ1Q9BXG8 430 aa20.05■□□□□ 0.8
SHKBP1-212ENST00000596163 TM6SF1Q9BZW5 370 aa20.05■□□□□ 0.8
SHKBP1-212ENST00000596163 RBM28Q9NW13 759 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-212ENST00000596163 DDX20Q9UHI6 824 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-212ENST00000596163 LOC102724159A0A0B4J2E5 919 aa20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 B4DLN1 442 aa20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 ZBTB43O43298 467 aa20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 MRPL12P52815 198 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 RCAN1P53805 252 aa20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 CNTN2Q02246 1040 aa20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 PPP2R5BQ15173 497 aa20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 PWP2Q15269 919 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 PRAMEF19Q5SWL8 479 aa20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 APOA5Q6Q788 366 aa20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 Q6ZUG5 572 aa20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 HOMER1Q86YM7 354 aa20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 FBXL16Q8N461 479 aa20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 SHISA4Q96DD7 197 aa20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 PIGSQ96S52 555 aa20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 SEC63Q9UGP8 760 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 OGDHLQ9ULD0 1010 aa20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 PCDHA1Q9Y5I3 950 aa20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 CYP46A1Q9Y6A2 500 aa20.04■□□□□ 0.8
SHKBP1-212ENST00000596163 TAL1P17542 331 aaPredicted RBP20.03■□□□□ 0.8
SHKBP1-212ENST00000596163 CALML3P27482 149 aa20.03■□□□□ 0.8
SHKBP1-212ENST00000596163 RUFY3Q7L099 469 aa20.03■□□□□ 0.8
SHKBP1-212ENST00000596163 MICU3Q86XE3 530 aa20.03■□□□□ 0.8
SHKBP1-212ENST00000596163 SAMD3Q8N6K7 520 aa20.03■□□□□ 0.8
SHKBP1-212ENST00000596163 TRPV1Q8NER1 839 aa20.03■□□□□ 0.8
SHKBP1-212ENST00000596163 ABHD16BQ9H3Z7 469 aa20.03■□□□□ 0.8
SHKBP1-212ENST00000596163 ZSWIM6Q9HCJ5 1215 aa20.03■□□□□ 0.8
SHKBP1-212ENST00000596163 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.03■□□□□ 0.8
SHKBP1-212ENST00000596163 MAP3K20Q9NYL2 800 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-212ENST00000596163 KIAA0100Q14667 2235 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-212ENST00000596163 KLF18A0A0U1RQI7 1052 aa20.02■□□□□ 0.8
SHKBP1-212ENST00000596163 SOWAHBA6NEL2 793 aa20.02■□□□□ 0.8
SHKBP1-212ENST00000596163 CYTH3O43739 400 aa20.02■□□□□ 0.8
SHKBP1-212ENST00000596163 FARP2O94887 1054 aaPredicted RBP20.02■□□□□ 0.8
SHKBP1-212ENST00000596163 RXRAP19793 462 aa20.02■□□□□ 0.8
SHKBP1-212ENST00000596163 ANAPC15P60006 121 aa20.02■□□□□ 0.8
SHKBP1-212ENST00000596163 RPS6P62753 249 aaKnown RBP20.02■□□□□ 0.8
SHKBP1-212ENST00000596163 LHX8Q68G74 356 aa20.02■□□□□ 0.8
SHKBP1-212ENST00000596163 ARMCX2Q7L311 632 aa20.02■□□□□ 0.8
SHKBP1-212ENST00000596163 CCDC144CPQ8IYA2 1237 aa20.02■□□□□ 0.8
SHKBP1-212ENST00000596163 FAM184BQ9ULE4 1060 aa20.02■□□□□ 0.8
SHKBP1-212ENST00000596163 NAP1L2Q9ULW6 460 aaPredicted RBP20.02■□□□□ 0.8
SHKBP1-212ENST00000596163 RBBP6Q7Z6E9 1792 aaKnown RBP20.01■□□□□ 0.79
SHKBP1-212ENST00000596163 CCDC196A0A1B0GTZ2 297 aa20.01■□□□□ 0.79
SHKBP1-212ENST00000596163 SNAI1O95863 264 aaPredicted RBP20.01■□□□□ 0.79
SHKBP1-212ENST00000596163 AKR1A1P14550 325 aa20.01■□□□□ 0.79
SHKBP1-212ENST00000596163 CPA1P15085 419 aa20.01■□□□□ 0.79
SHKBP1-212ENST00000596163 ACVR2BQ13705 512 aa20.01■□□□□ 0.79
SHKBP1-212ENST00000596163 RTN1Q16799 776 aa20.01■□□□□ 0.79
SHKBP1-212ENST00000596163 ARRDC4Q8NCT1 418 aa20.01■□□□□ 0.79
SHKBP1-212ENST00000596163 DNERQ8NFT8 737 aa20.01■□□□□ 0.79
SHKBP1-212ENST00000596163 BRF1Q92994 677 aa20.01■□□□□ 0.79
SHKBP1-212ENST00000596163 FGD4Q96M96 766 aa20.01■□□□□ 0.79
SHKBP1-212ENST00000596163 ZHX1Q9UKY1 873 aaPredicted RBP20.01■□□□□ 0.79
SHKBP1-212ENST00000596163 BRPF3Q9ULD4 1205 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms