RNA–Protein interactions for RNA: ENST00000593455.5

PSMC4-203, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 5

Gene PSMC4, Length 1,532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-203ENST00000593455 FAM217BQ9NTX9 383 aaPredicted RBP17.17■□□□□ 0.34
PSMC4-203ENST00000593455 RBM27Q9P2N5 1060 aaKnown RBP17.17■□□□□ 0.34
PSMC4-203ENST00000593455 V9GY48 417 aaPredicted RBP17.17■□□□□ 0.34
PSMC4-203ENST00000593455 RGS2P41220 211 aa17.16■□□□□ 0.34
PSMC4-203ENST00000593455 FLT3LGP49771 235 aa17.16■□□□□ 0.34
PSMC4-203ENST00000593455 PRKCZQ05513 592 aa17.16■□□□□ 0.34
PSMC4-203ENST00000593455 MCF2L2Q86YR7 1114 aa17.16■□□□□ 0.34
PSMC4-203ENST00000593455 TRIM22Q8IYM9 498 aa17.16■□□□□ 0.34
PSMC4-203ENST00000593455 NID2Q14112 1375 aa17.16■□□□□ 0.34
PSMC4-203ENST00000593455 A0A0G2JMZ2 1700 aa17.16■□□□□ 0.34
PSMC4-203ENST00000593455 IFNAR1P17181 557 aa17.16■□□□□ 0.34
PSMC4-203ENST00000593455 ADORA2AP29274 412 aa17.16■□□□□ 0.34
PSMC4-203ENST00000593455 SSRP1Q08945 709 aaKnown RBP17.16■□□□□ 0.34
PSMC4-203ENST00000593455 MAP2K5Q13163 448 aa17.16■□□□□ 0.34
PSMC4-203ENST00000593455 ME3Q16798 604 aa17.16■□□□□ 0.34
PSMC4-203ENST00000593455 SLC35G1Q2M3R5 365 aa17.16■□□□□ 0.34
PSMC4-203ENST00000593455 GJD2Q9UKL4 321 aa17.16■□□□□ 0.34
PSMC4-203ENST00000593455 GABRQQ9UN88 632 aa17.16■□□□□ 0.34
PSMC4-203ENST00000593455 PTPN22Q9Y2R2 807 aa17.16■□□□□ 0.34
PSMC4-203ENST00000593455 COL11A1P12107 1806 aaPredicted RBP17.16■□□□□ 0.34
PSMC4-203ENST00000593455 PFASO15067 1338 aa17.15■□□□□ 0.34
PSMC4-203ENST00000593455 CYP2B6P20813 491 aa17.15■□□□□ 0.34
PSMC4-203ENST00000593455 SCRN1Q12765 414 aa17.15■□□□□ 0.34
PSMC4-203ENST00000593455 GRB14Q14449 540 aa17.15■□□□□ 0.34
PSMC4-203ENST00000593455 MUM1L1Q5H9M0 696 aa17.15■□□□□ 0.34
PSMC4-203ENST00000593455 MORN1Q5T089 497 aa17.15■□□□□ 0.34
PSMC4-203ENST00000593455 NSMFQ6X4W1 530 aa17.15■□□□□ 0.34
PSMC4-203ENST00000593455 SLC26A6Q9BXS9 759 aa17.15■□□□□ 0.34
PSMC4-203ENST00000593455 SH2B1Q9NRF2 756 aaPredicted RBP17.15■□□□□ 0.34
PSMC4-203ENST00000593455 hCG_1642624A0A1W2PR95 340 aa17.14■□□□□ 0.33
PSMC4-203ENST00000593455 PTPDC1A2A3K4 754 aa17.14■□□□□ 0.33
PSMC4-203ENST00000593455 PRPF3O43395 683 aaKnown RBP17.14■□□□□ 0.33
PSMC4-203ENST00000593455 CAP1Q01518 475 aa17.14■□□□□ 0.33
PSMC4-203ENST00000593455 FUT2Q10981 343 aa17.14■□□□□ 0.33
PSMC4-203ENST00000593455 IRF5Q13568 498 aa17.14■□□□□ 0.33
PSMC4-203ENST00000593455 FBXO46Q6PJ61 603 aaPredicted RBP17.14■□□□□ 0.33
PSMC4-203ENST00000593455 TRMT44Q8IYL2 757 aaKnown RBP17.14■□□□□ 0.33
PSMC4-203ENST00000593455 RNF26Q9BY78 433 aaPredicted RBP17.14■□□□□ 0.33
PSMC4-203ENST00000593455 MAF1Q9H063 256 aa17.14■□□□□ 0.33
PSMC4-203ENST00000593455 CNTNAP5Q8WYK1 1306 aa17.14■□□□□ 0.33
PSMC4-203ENST00000593455 XRCC5P13010 732 aaKnown RBP17.13■□□□□ 0.33
PSMC4-203ENST00000593455 NTRK3Q16288 839 aa17.13■□□□□ 0.33
PSMC4-203ENST00000593455 RNF207Q6ZRF8 634 aa17.13■□□□□ 0.33
PSMC4-203ENST00000593455 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.13■□□□□ 0.33
PSMC4-203ENST00000593455 HEATR3Q7Z4Q2 680 aa17.13■□□□□ 0.33
PSMC4-203ENST00000593455 NECAB1Q8N987 351 aa17.13■□□□□ 0.33
PSMC4-203ENST00000593455 RGS22Q8NE09 1264 aa17.13■□□□□ 0.33
PSMC4-203ENST00000593455 PHKBQ93100 1093 aa17.13■□□□□ 0.33
PSMC4-203ENST00000593455 BAZ2BQ9UIF8 2168 aaKnown RBP17.13■□□□□ 0.33
PSMC4-203ENST00000593455 POTEB2H3BUK9 544 aa17.12■□□□□ 0.33
PSMC4-203ENST00000593455 hCG_1984214I3L0E3 225 aa17.12■□□□□ 0.33
PSMC4-203ENST00000593455 ADCY3O60266 1144 aa17.12■□□□□ 0.33
PSMC4-203ENST00000593455 PPP1R11O60927 126 aaPredicted RBP17.12■□□□□ 0.33
PSMC4-203ENST00000593455 SAMD3Q8N6K7 520 aa17.12■□□□□ 0.33
PSMC4-203ENST00000593455 ZNF713Q8N859 430 aaPredicted RBP17.12■□□□□ 0.33
PSMC4-203ENST00000593455 CLEC4DQ8WXI8 215 aa17.12■□□□□ 0.33
PSMC4-203ENST00000593455 GTF3C6Q969F1 213 aa17.12■□□□□ 0.33
PSMC4-203ENST00000593455 APBA2Q99767 749 aa17.12■□□□□ 0.33
PSMC4-203ENST00000593455 A1CFQ9NQ94 594 aaKnown RBP17.12■□□□□ 0.33
PSMC4-203ENST00000593455 MAP3K20Q9NYL2 800 aaKnown RBP17.12■□□□□ 0.33
PSMC4-203ENST00000593455 BIN2Q9UBW5 565 aaPredicted RBP17.12■□□□□ 0.33
PSMC4-203ENST00000593455 DIS3Q9Y2L1 958 aaKnown RBP17.12■□□□□ 0.33
PSMC4-203ENST00000593455 PTCH2Q9Y6C5 1203 aa17.12■□□□□ 0.33
PSMC4-203ENST00000593455 MGAMO43451 1857 aa17.12■□□□□ 0.33
PSMC4-203ENST00000593455 NFIBO00712 420 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 CFBP00751 764 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 PGK2P07205 417 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 SCG2P13521 617 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 TAL1P17542 331 aaPredicted RBP17.11■□□□□ 0.33
PSMC4-203ENST00000593455 CALML3P27482 149 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 GRK4P32298 578 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 BAATQ14032 418 aaPredicted RBP17.11■□□□□ 0.33
PSMC4-203ENST00000593455 PFKFB3Q16875 520 aaPredicted RBP17.11■□□□□ 0.33
PSMC4-203ENST00000593455 PXYLP1Q8TE99 480 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 CCDC12Q8WUD4 166 aaPredicted RBP17.11■□□□□ 0.33
PSMC4-203ENST00000593455 USP6NLQ92738 828 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 CUL5Q93034 780 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 CYP39A1Q9NYL5 469 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 COBLO75128 1261 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 PPFIA3O75145 1194 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 DEXIO95424 95 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 LARGE1O95461 756 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 HOXC6P09630 235 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 NAPAP54920 295 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 SLC9C1Q4G0N8 1177 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 SLAIN1Q8ND83 568 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 WASF1Q92558 559 aa17.11■□□□□ 0.33
PSMC4-203ENST00000593455 ADD3Q9UEY8 706 aaKnown RBP17.11■□□□□ 0.33
PSMC4-203ENST00000593455 GCOM1H8Y6P7 765 aaPredicted RBP17.1■□□□□ 0.33
PSMC4-203ENST00000593455 POLR2MP0CAP2 368 aa17.1■□□□□ 0.33
PSMC4-203ENST00000593455 XBP1P17861 261 aa17.1■□□□□ 0.33
PSMC4-203ENST00000593455 RPS6P62753 249 aaKnown RBP17.1■□□□□ 0.33
PSMC4-203ENST00000593455 ZNF792Q3KQV3 632 aa17.1■□□□□ 0.33
PSMC4-203ENST00000593455 COL13A1Q5TAT6 717 aaPredicted RBP17.1■□□□□ 0.33
PSMC4-203ENST00000593455 CCDC83Q8IWF9 413 aa17.1■□□□□ 0.33
PSMC4-203ENST00000593455 GPKOWQ92917 476 aaPredicted RBP eCLIP17.1■□□□□ 0.33
PSMC4-203ENST00000593455 MPHOSPH6Q99547 160 aaKnown RBP17.1■□□□□ 0.33
PSMC4-203ENST00000593455 MCOLN1Q9GZU1 580 aa17.1■□□□□ 0.33
PSMC4-203ENST00000593455 GLT8D2Q9H1C3 349 aa17.1■□□□□ 0.33
PSMC4-203ENST00000593455 PSTPIP2Q9H939 334 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms