RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 MAP2K5Q13163 448 aa16.34■□□□□ 0.21
MBD1-225ENST00000591535 GRB14Q14449 540 aa16.34■□□□□ 0.21
MBD1-225ENST00000591535 SLC35G1Q2M3R5 365 aa16.34■□□□□ 0.21
MBD1-225ENST00000591535 ABRAQ8N0Z2 381 aa16.34■□□□□ 0.21
MBD1-225ENST00000591535 ZNF274Q96GC6 653 aaPredicted RBP16.34■□□□□ 0.21
MBD1-225ENST00000591535 TBC1D32Q96NH3 1257 aa16.34■□□□□ 0.21
MBD1-225ENST00000591535 BIN2Q9UBW5 565 aaPredicted RBP16.34■□□□□ 0.21
MBD1-225ENST00000591535 HPS5Q9UPZ3 1129 aa16.34■□□□□ 0.21
MBD1-225ENST00000591535 PNMA6FA0A0J9YX94 578 aa16.33■□□□□ 0.2
MBD1-225ENST00000591535 ADCY3O60266 1144 aa16.33■□□□□ 0.2
MBD1-225ENST00000591535 PGK2P07205 417 aa16.33■□□□□ 0.2
MBD1-225ENST00000591535 CDC27P30260 824 aa16.33■□□□□ 0.2
MBD1-225ENST00000591535 TRAF1Q13077 416 aa16.33■□□□□ 0.2
MBD1-225ENST00000591535 SLC9C1Q4G0N8 1177 aa16.33■□□□□ 0.2
MBD1-225ENST00000591535 MUM1L1Q5H9M0 696 aa16.33■□□□□ 0.2
MBD1-225ENST00000591535 NSMFQ6X4W1 530 aa16.33■□□□□ 0.2
MBD1-225ENST00000591535 TNS4Q8IZW8 715 aa16.33■□□□□ 0.2
MBD1-225ENST00000591535 MTMR8Q96EF0 704 aa16.33■□□□□ 0.2
MBD1-225ENST00000591535 KIF2CQ99661 725 aa16.33■□□□□ 0.2
MBD1-225ENST00000591535 SLC5A4Q9NY91 659 aa16.33■□□□□ 0.2
MBD1-225ENST00000591535 PCDHA1Q9Y5I3 950 aa16.33■□□□□ 0.2
MBD1-225ENST00000591535 ABCB11O95342 1321 aa16.32■□□□□ 0.2
MBD1-225ENST00000591535 hCG_1642624A0A1W2PR95 340 aa16.32■□□□□ 0.2
MBD1-225ENST00000591535 IRF5Q13568 498 aa16.32■□□□□ 0.2
MBD1-225ENST00000591535 RABEP1Q15276 862 aa16.32■□□□□ 0.2
MBD1-225ENST00000591535 NCOA5Q9HCD5 579 aaKnown RBP16.32■□□□□ 0.2
MBD1-225ENST00000591535 FAM217BQ9NTX9 383 aaPredicted RBP16.32■□□□□ 0.2
MBD1-225ENST00000591535 TPCN1Q9ULQ1 816 aa16.32■□□□□ 0.2
MBD1-225ENST00000591535 ELNP15502 786 aa16.31■□□□□ 0.2
MBD1-225ENST00000591535 GRK4P32298 578 aa16.31■□□□□ 0.2
MBD1-225ENST00000591535 USP6NLQ92738 828 aa16.31■□□□□ 0.2
MBD1-225ENST00000591535 APBA2Q99767 749 aa16.31■□□□□ 0.2
MBD1-225ENST00000591535 SLKQ9H2G2 1235 aaPredicted RBP16.31■□□□□ 0.2
MBD1-225ENST00000591535 MRPL11Q9Y3B7 192 aaKnown RBP16.31■□□□□ 0.2
MBD1-225ENST00000591535 PTPDC1A2A3K4 754 aa16.3■□□□□ 0.2
MBD1-225ENST00000591535 NFIBO00712 420 aa16.3■□□□□ 0.2
MBD1-225ENST00000591535 CPLX1O14810 134 aa16.3■□□□□ 0.2
MBD1-225ENST00000591535 PPP1R11O60927 126 aaPredicted RBP16.3■□□□□ 0.2
MBD1-225ENST00000591535 COBLO75128 1261 aa16.3■□□□□ 0.2
MBD1-225ENST00000591535 XRCC5P13010 732 aaKnown RBP16.3■□□□□ 0.2
MBD1-225ENST00000591535 SLAIN1Q8ND83 568 aa16.3■□□□□ 0.2
MBD1-225ENST00000591535 SH3TC2Q8TF17 1288 aa16.3■□□□□ 0.2
MBD1-225ENST00000591535 A1CFQ9NQ94 594 aaKnown RBP16.3■□□□□ 0.2
MBD1-225ENST00000591535 V9GY48 417 aaPredicted RBP16.3■□□□□ 0.2
MBD1-225ENST00000591535 PFASO15067 1338 aa16.3■□□□□ 0.2
MBD1-225ENST00000591535 ST18O60284 1047 aa16.3■□□□□ 0.2
MBD1-225ENST00000591535 AKAP17AQ02040 695 aaKnown RBP16.3■□□□□ 0.2
MBD1-225ENST00000591535 CPLX2Q6PUV4 134 aaKnown RBP16.3■□□□□ 0.2
MBD1-225ENST00000591535 PXYLP1Q8TE99 480 aa16.3■□□□□ 0.2
MBD1-225ENST00000591535 CNTNAP5Q8WYK1 1306 aa16.29■□□□□ 0.2
MBD1-225ENST00000591535 NID2Q14112 1375 aa16.29■□□□□ 0.2
MBD1-225ENST00000591535 PLXNA1Q9UIW2 1896 aa16.29■□□□□ 0.2
MBD1-225ENST00000591535 POTEB2H3BUK9 544 aa16.29■□□□□ 0.2
MBD1-225ENST00000591535 PPFIA3O75145 1194 aa16.29■□□□□ 0.2
MBD1-225ENST00000591535 MYCP01106 439 aaPredicted RBP16.29■□□□□ 0.2
MBD1-225ENST00000591535 CALML3P27482 149 aa16.29■□□□□ 0.2
MBD1-225ENST00000591535 BAATQ14032 418 aaPredicted RBP16.29■□□□□ 0.2
MBD1-225ENST00000591535 CCL14Q16627 93 aa16.29■□□□□ 0.2
MBD1-225ENST00000591535 RNF207Q6ZRF8 634 aa16.29■□□□□ 0.2
MBD1-225ENST00000591535 HEATR3Q7Z4Q2 680 aa16.29■□□□□ 0.2
MBD1-225ENST00000591535 MCF2L2Q86YR7 1114 aa16.29■□□□□ 0.2
MBD1-225ENST00000591535 TRMT44Q8IYL2 757 aaKnown RBP16.29■□□□□ 0.2
MBD1-225ENST00000591535 NPLOC4Q8TAT6 608 aa16.29■□□□□ 0.2
MBD1-225ENST00000591535 CLEC4DQ8WXI8 215 aa16.29■□□□□ 0.2
MBD1-225ENST00000591535 PHKBQ93100 1093 aa16.29■□□□□ 0.2
MBD1-225ENST00000591535 CYP39A1Q9NYL5 469 aa16.29■□□□□ 0.2
MBD1-225ENST00000591535 ZNF236Q9UL36 1845 aa16.29■□□□□ 0.2
MBD1-225ENST00000591535 PFKFB2O60825 505 aa16.28■□□□□ 0.2
MBD1-225ENST00000591535 HOXC6P09630 235 aa16.28■□□□□ 0.2
MBD1-225ENST00000591535 FUT2Q10981 343 aa16.28■□□□□ 0.2
MBD1-225ENST00000591535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.28■□□□□ 0.2
MBD1-225ENST00000591535 TRIB2Q92519 343 aa16.28■□□□□ 0.2
MBD1-225ENST00000591535 SLC26A6Q9BXS9 759 aa16.28■□□□□ 0.2
MBD1-225ENST00000591535 LIMCH1Q9UPQ0 1083 aa16.28■□□□□ 0.2
MBD1-225ENST00000591535 CFBP00751 764 aa16.27■□□□□ 0.2
MBD1-225ENST00000591535 HMGCRP04035 888 aa16.27■□□□□ 0.2
MBD1-225ENST00000591535 CNTN2Q02246 1040 aa16.27■□□□□ 0.2
MBD1-225ENST00000591535 SCRN1Q12765 414 aa16.27■□□□□ 0.2
MBD1-225ENST00000591535 ME3Q16798 604 aa16.27■□□□□ 0.2
MBD1-225ENST00000591535 ZNF792Q3KQV3 632 aa16.27■□□□□ 0.2
MBD1-225ENST00000591535 NECAB1Q8N987 351 aa16.27■□□□□ 0.2
MBD1-225ENST00000591535 MAML3Q96JK9 1138 aa16.27■□□□□ 0.2
MBD1-225ENST00000591535 DNAJC25-GNG10A0A024R161 153 aa16.27■□□□□ 0.19
MBD1-225ENST00000591535 INHAP05111 366 aa16.27■□□□□ 0.19
MBD1-225ENST00000591535 IFNAR1P17181 557 aa16.27■□□□□ 0.19
MBD1-225ENST00000591535 RPS6P62753 249 aaKnown RBP16.27■□□□□ 0.19
MBD1-225ENST00000591535 UBXN2AP68543 259 aa16.27■□□□□ 0.19
MBD1-225ENST00000591535 SSRP1Q08945 709 aaKnown RBP16.27■□□□□ 0.19
MBD1-225ENST00000591535 MFSD14CQ5VZR4 134 aa16.27■□□□□ 0.19
MBD1-225ENST00000591535 TRIM22Q8IYM9 498 aa16.27■□□□□ 0.19
MBD1-225ENST00000591535 TBC1D5Q92609 795 aa16.27■□□□□ 0.19
MBD1-225ENST00000591535 GPKOWQ92917 476 aaPredicted RBP eCLIP16.27■□□□□ 0.19
MBD1-225ENST00000591535 FLRT1Q9NZU1 646 aa16.27■□□□□ 0.19
MBD1-225ENST00000591535 DIS3Q9Y2L1 958 aaKnown RBP16.27■□□□□ 0.19
MBD1-225ENST00000591535 PRPF3O43395 683 aaKnown RBP16.26■□□□□ 0.19
MBD1-225ENST00000591535 CDKL5O76039 1030 aa16.26■□□□□ 0.19
MBD1-225ENST00000591535 LARGE1O95461 756 aa16.26■□□□□ 0.19
MBD1-225ENST00000591535 NTRK3Q16288 839 aa16.26■□□□□ 0.19
MBD1-225ENST00000591535 SLC30A10Q6XR72 485 aa16.26■□□□□ 0.19
MBD1-225ENST00000591535 RGS22Q8NE09 1264 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms