RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 TRERF1Q96PN7 1200 aa19.7■□□□□ 0.74
RPRD1A-209ENST00000590898 PORCNQ9H237 461 aa19.7■□□□□ 0.74
RPRD1A-209ENST00000590898 MRPL11Q9Y3B7 192 aaKnown RBP19.7■□□□□ 0.74
RPRD1A-209ENST00000590898 STRNO43815 780 aa19.69■□□□□ 0.74
RPRD1A-209ENST00000590898 FKTNO75072 461 aa19.69■□□□□ 0.74
RPRD1A-209ENST00000590898 ALAS1P13196 640 aa19.69■□□□□ 0.74
RPRD1A-209ENST00000590898 NCAPG2Q86XI2 1143 aa19.69■□□□□ 0.74
RPRD1A-209ENST00000590898 FAM177A1Q8N128 213 aaPredicted RBP19.69■□□□□ 0.74
RPRD1A-209ENST00000590898 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.69■□□□□ 0.74
RPRD1A-209ENST00000590898 hCG_1642624A0A1W2PR95 340 aa19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 HSP90AA1P07900 732 aaKnown RBP19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 DDIT3P35638 169 aa19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 KIF22Q14807 665 aa19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 USH1GQ495M9 461 aa19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 RGS22Q8NE09 1264 aa19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 WASF1Q92558 559 aa19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 INTS4Q96HW7 963 aaKnown RBP19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 BARHL2Q9NY43 387 aa19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 ORC3Q9UBD5 711 aaPredicted RBP19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 PTPDC1A2A3K4 754 aa19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 FDPSP14324 419 aaKnown RBP19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 NBR1Q14596 966 aa19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 ARHGEF6Q15052 776 aa19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 TEX2Q8IWB9 1127 aa19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 SAMD3Q8N6K7 520 aa19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 ZNF296Q8WUU4 475 aaPredicted RBP19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 ERO1AQ96HE7 468 aa19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 ACAD9Q9H845 621 aa19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 EFCC1Q9HA90 598 aa19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 RNF146Q9NTX7 359 aa19.68■□□□□ 0.74
RPRD1A-209ENST00000590898 ABRAQ8N0Z2 381 aa19.67■□□□□ 0.74
RPRD1A-209ENST00000590898 COA7Q96BR5 231 aa19.67■□□□□ 0.74
RPRD1A-209ENST00000590898 SH3GLB2Q9NR46 395 aa19.67■□□□□ 0.74
RPRD1A-209ENST00000590898 CASP8AP2Q9UKL3 1982 aa19.67■□□□□ 0.74
RPRD1A-209ENST00000590898 GNRH1P01148 92 aa19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 HSPA1AP0DMV8 641 aaKnown RBP19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 HSPA1BP0DMV9 641 aaKnown RBP19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 PPP1R18Q6NYC8 613 aa19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 HEATR3Q7Z4Q2 680 aa19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 CCDC12Q8WUD4 166 aaPredicted RBP19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 CLEC4DQ8WXI8 215 aa19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 MAP3K20Q9NYL2 800 aaKnown RBP19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 JAK2O60674 1132 aa19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 PPFIA3O75145 1194 aa19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 PSMC4P43686 418 aa19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 CTCFP49711 727 aaPredicted RBP19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 FCGRTP55899 365 aa19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 WWC2Q6AWC2 1192 aa19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 GPR142Q7Z601 462 aa19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 PLEKHH3Q7Z736 793 aa19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 MCF2L2Q86YR7 1114 aa19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 TSKSQ9UJT2 592 aa19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 IVNS1ABPQ9Y6Y0 642 aa19.66■□□□□ 0.74
RPRD1A-209ENST00000590898 PLXNB2O15031 1838 aa19.65■□□□□ 0.74
RPRD1A-209ENST00000590898 FOXN1O15353 648 aa19.65■□□□□ 0.74
RPRD1A-209ENST00000590898 FCER1AP12319 257 aa19.65■□□□□ 0.74
RPRD1A-209ENST00000590898 ANP32EQ9BTT0 268 aa19.65■□□□□ 0.74
RPRD1A-209ENST00000590898 GLT8D2Q9H1C3 349 aa19.65■□□□□ 0.74
RPRD1A-209ENST00000590898 HOMER2Q9NSB8 354 aa19.65■□□□□ 0.74
RPRD1A-209ENST00000590898 KIF3AQ9Y496 699 aa19.65■□□□□ 0.74
RPRD1A-209ENST00000590898 STXBP3O00186 592 aa19.64■□□□□ 0.74
RPRD1A-209ENST00000590898 XBP1P17861 261 aa19.64■□□□□ 0.74
RPRD1A-209ENST00000590898 PTPREP23469 700 aa19.64■□□□□ 0.74
RPRD1A-209ENST00000590898 GHRHRQ02643 423 aa19.64■□□□□ 0.74
RPRD1A-209ENST00000590898 MUM1L1Q5H9M0 696 aa19.64■□□□□ 0.74
RPRD1A-209ENST00000590898 GPKOWQ92917 476 aaPredicted RBP eCLIP19.64■□□□□ 0.74
RPRD1A-209ENST00000590898 DDX11Q96FC9 970 aa19.64■□□□□ 0.74
RPRD1A-209ENST00000590898 CWC22Q9HCG8 908 aaKnown RBP19.64■□□□□ 0.74
RPRD1A-209ENST00000590898 ESYT2A0FGR8 921 aa19.64■□□□□ 0.73
RPRD1A-209ENST00000590898 SLC15A5A6NIM6 579 aa19.64■□□□□ 0.73
RPRD1A-209ENST00000590898 TNPO2O14787 897 aaKnown RBP19.64■□□□□ 0.73
RPRD1A-209ENST00000590898 HSPA8P11142 646 aaKnown RBP19.64■□□□□ 0.73
RPRD1A-209ENST00000590898 KCTD2Q14681 263 aa19.64■□□□□ 0.73
RPRD1A-209ENST00000590898 WDR78Q5VTH9 848 aa19.64■□□□□ 0.73
RPRD1A-209ENST00000590898 CCDC148Q8NFR7 591 aa19.64■□□□□ 0.73
RPRD1A-209ENST00000590898 TRIM47Q96LD4 638 aa19.64■□□□□ 0.73
RPRD1A-209ENST00000590898 SMC3Q9UQE7 1217 aa19.64■□□□□ 0.73
RPRD1A-209ENST00000590898 PFASO15067 1338 aa19.64■□□□□ 0.73
RPRD1A-209ENST00000590898 NFIBO00712 420 aa19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 HOXD10P28358 340 aa19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 CTGFP29279 349 aa19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 NAPAP54920 295 aa19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 GRB14Q14449 540 aa19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 ANKRD35Q8N283 1001 aa19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 FAM184AQ8NB25 1140 aa19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 MMP19Q99542 508 aa19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 ZMYND12Q9H0C1 365 aa19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 RBBP6Q7Z6E9 1792 aaKnown RBP19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 OPLAHO14841 1288 aa19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 TAL1P17542 331 aaPredicted RBP19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 TYW1BQ6NUM6 668 aa19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 CD99L2Q8TCZ2 262 aa19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 ALG1Q9BT22 464 aa19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 PSTPIP2Q9H939 334 aa19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 A1CFQ9NQ94 594 aaKnown RBP19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 CHMP5Q9NZZ3 219 aa19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 GJD2Q9UKL4 321 aa19.63■□□□□ 0.73
RPRD1A-209ENST00000590898 PIK3CDO00329 1044 aa19.62■□□□□ 0.73
RPRD1A-209ENST00000590898 GNA11P29992 359 aa19.62■□□□□ 0.73
RPRD1A-209ENST00000590898 MRPL12P52815 198 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms