RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 SLC16A2P36021 539 aa25.69■■□□□ 1.7
DDX39A-215ENST00000590696 BEX3Q00994 111 aa25.69■■□□□ 1.7
DDX39A-215ENST00000590696 NMIQ13287 307 aaPredicted RBP25.69■■□□□ 1.7
DDX39A-215ENST00000590696 TTBK2Q6IQ55 1244 aa25.69■■□□□ 1.7
DDX39A-215ENST00000590696 TICAM2Q86XR7 235 aa25.69■■□□□ 1.7
DDX39A-215ENST00000590696 LNPKQ9C0E8 428 aa25.69■■□□□ 1.7
DDX39A-215ENST00000590696 CYP39A1Q9NYL5 469 aa25.69■■□□□ 1.7
DDX39A-215ENST00000590696 TBX21Q9UL17 535 aa25.69■■□□□ 1.7
DDX39A-215ENST00000590696 DDX49Q9Y6V7 483 aaKnown RBP25.69■■□□□ 1.7
DDX39A-215ENST00000590696 ASTN1O14525 1302 aa25.68■■□□□ 1.7
DDX39A-215ENST00000590696 ARVCFO00192 962 aa25.68■■□□□ 1.7
DDX39A-215ENST00000590696 NKX3-2P78367 333 aa25.68■■□□□ 1.7
DDX39A-215ENST00000590696 NSMFQ6X4W1 530 aa25.68■■□□□ 1.7
DDX39A-215ENST00000590696 ZNF589Q86UQ0 364 aaPredicted RBP25.68■■□□□ 1.7
DDX39A-215ENST00000590696 CDX2Q99626 313 aaPredicted RBP25.68■■□□□ 1.7
DDX39A-215ENST00000590696 TMEM47Q9BQJ4 181 aa25.68■■□□□ 1.7
DDX39A-215ENST00000590696 RANBP17Q9H2T7 1088 aaKnown RBP25.68■■□□□ 1.7
DDX39A-215ENST00000590696 TCP11L1Q9NUJ3 509 aa25.68■■□□□ 1.7
DDX39A-215ENST00000590696 A0A0C4DFX4 3053 aa25.67■■□□□ 1.7
DDX39A-215ENST00000590696 ICAM1P05362 532 aa25.67■■□□□ 1.7
DDX39A-215ENST00000590696 TOP1P11387 765 aaKnown RBP25.67■■□□□ 1.7
DDX39A-215ENST00000590696 BTNL9Q6UXG8 535 aa25.67■■□□□ 1.7
DDX39A-215ENST00000590696 RILPL2Q969X0 211 aa25.67■■□□□ 1.7
DDX39A-215ENST00000590696 GNEQ9Y223 722 aaKnown RBP25.67■■□□□ 1.7
DDX39A-215ENST00000590696 HAND2P61296 217 aa25.66■■□□□ 1.7
DDX39A-215ENST00000590696 SYDE2Q5VT97 1194 aa25.66■■□□□ 1.7
DDX39A-215ENST00000590696 MFSD5Q6N075 450 aa25.66■■□□□ 1.7
DDX39A-215ENST00000590696 EEPD1Q7L9B9 569 aa25.66■■□□□ 1.7
DDX39A-215ENST00000590696 PURBQ96QR8 312 aaKnown RBP25.66■■□□□ 1.7
DDX39A-215ENST00000590696 TTYH1Q9H313 450 aaPredicted RBP25.66■■□□□ 1.7
DDX39A-215ENST00000590696 GPCPD1Q9NPB8 672 aa25.66■■□□□ 1.7
DDX39A-215ENST00000590696 PDGFCQ9NRA1 345 aa25.66■■□□□ 1.7
DDX39A-215ENST00000590696 ZMYM6O95789 1325 aa25.65■■□□□ 1.7
DDX39A-215ENST00000590696 FRMPD2Q68DX3 1309 aaPredicted RBP25.65■■□□□ 1.7
DDX39A-215ENST00000590696 CCDC171Q6TFL3 1326 aa25.65■■□□□ 1.7
DDX39A-215ENST00000590696 SMPD1P17405 629 aa25.65■■□□□ 1.7
DDX39A-215ENST00000590696 TLK2Q86UE8 772 aa25.65■■□□□ 1.7
DDX39A-215ENST00000590696 FAM126BQ8IXS8 530 aa25.65■■□□□ 1.7
DDX39A-215ENST00000590696 AP5M1Q9H0R1 490 aa25.65■■□□□ 1.7
DDX39A-215ENST00000590696 TLR3O15455 904 aaKnown RBP25.64■■□□□ 1.7
DDX39A-215ENST00000590696 DYNC1LI2O43237 492 aaPredicted RBP25.64■■□□□ 1.7
DDX39A-215ENST00000590696 PTGS1P23219 599 aa25.64■■□□□ 1.7
DDX39A-215ENST00000590696 IQSEC1Q6DN90 963 aa25.64■■□□□ 1.7
DDX39A-215ENST00000590696 B4GALNT3Q6L9W6 998 aa25.64■■□□□ 1.7
DDX39A-215ENST00000590696 TAPT1Q6NXT6 567 aa25.64■■□□□ 1.7
DDX39A-215ENST00000590696 CXCL17Q6UXB2 119 aa25.64■■□□□ 1.7
DDX39A-215ENST00000590696 FBXO16Q8IX29 292 aaPredicted RBP25.64■■□□□ 1.7
DDX39A-215ENST00000590696 LRRC37A2A6NM11 1700 aa25.63■■□□□ 1.69
DDX39A-215ENST00000590696 AAMPQ13685 434 aa25.63■■□□□ 1.69
DDX39A-215ENST00000590696 BAATQ14032 418 aaPredicted RBP25.63■■□□□ 1.69
DDX39A-215ENST00000590696 FSCN1Q16658 493 aaKnown RBP25.63■■□□□ 1.69
DDX39A-215ENST00000590696 AKNAD1Q5T1N1 836 aa25.63■■□□□ 1.69
DDX39A-215ENST00000590696 MFSD6Q6ZSS7 791 aa25.63■■□□□ 1.69
DDX39A-215ENST00000590696 SMC5Q8IY18 1101 aa25.63■■□□□ 1.69
DDX39A-215ENST00000590696 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.63■■□□□ 1.691e-7■□□□□ 8.5
DDX39A-215ENST00000590696 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.62■■□□□ 1.69
DDX39A-215ENST00000590696 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.62■■□□□ 1.69
DDX39A-215ENST00000590696 CABYRO75952 493 aa25.62■■□□□ 1.69
DDX39A-215ENST00000590696 PDHBP11177 359 aa25.62■■□□□ 1.69
DDX39A-215ENST00000590696 PPIGQ13427 754 aaKnown RBP eCLIP25.62■■□□□ 1.692e-10■■□□□ 11.9
DDX39A-215ENST00000590696 TMEM63BQ5T3F8 832 aa25.62■■□□□ 1.69
DDX39A-215ENST00000590696 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.62■■□□□ 1.69
DDX39A-215ENST00000590696 MORC4Q8TE76 937 aa25.62■■□□□ 1.69
DDX39A-215ENST00000590696 MYLIPQ8WY64 445 aa25.62■■□□□ 1.69
DDX39A-215ENST00000590696 TTC14Q96N46 770 aa25.62■■□□□ 1.69
DDX39A-215ENST00000590696 PPP1R12CQ9BZL4 782 aa25.62■■□□□ 1.69
DDX39A-215ENST00000590696 RWDD1Q9H446 243 aaPredicted RBP25.62■■□□□ 1.69
DDX39A-215ENST00000590696 VTA1Q9NP79 307 aa25.62■■□□□ 1.69
DDX39A-215ENST00000590696 LCTP09848 1927 aa25.62■■□□□ 1.69
DDX39A-215ENST00000590696 NFIBO00712 420 aa25.61■■□□□ 1.69
DDX39A-215ENST00000590696 CD4P01730 458 aa25.61■■□□□ 1.69
DDX39A-215ENST00000590696 PCP11498 1178 aaKnown RBP25.61■■□□□ 1.69
DDX39A-215ENST00000590696 SDSP20132 328 aa25.61■■□□□ 1.69
DDX39A-215ENST00000590696 KIAA1211Q6ZU35 1233 aa25.61■■□□□ 1.69
DDX39A-215ENST00000590696 C16orf59Q7L2K0 433 aa25.61■■□□□ 1.69
DDX39A-215ENST00000590696 TBC1D10CQ8IV04 446 aa25.61■■□□□ 1.69
DDX39A-215ENST00000590696 TMEM199Q8N511 208 aa25.61■■□□□ 1.69
DDX39A-215ENST00000590696 SLC43A3Q8NBI5 491 aa25.61■■□□□ 1.69
DDX39A-215ENST00000590696 ADD3Q9UEY8 706 aaKnown RBP25.61■■□□□ 1.69
DDX39A-215ENST00000590696 Q9Y3F1 56 aa25.61■■□□□ 1.69
DDX39A-215ENST00000590696 PTPDC1A2A3K4 754 aa25.6■■□□□ 1.69
DDX39A-215ENST00000590696 ZEB2O60315 1214 aa25.6■■□□□ 1.69
DDX39A-215ENST00000590696 CSF2RAP15509 400 aa25.6■■□□□ 1.69
DDX39A-215ENST00000590696 ALDH5A1P51649 535 aaPredicted RBP25.6■■□□□ 1.69
DDX39A-215ENST00000590696 MFAP1P55081 439 aaKnown RBP25.6■■□□□ 1.69
DDX39A-215ENST00000590696 ITGA7Q13683 1181 aa25.6■■□□□ 1.69
DDX39A-215ENST00000590696 UNC80Q8N2C7 3258 aa25.6■■□□□ 1.69
DDX39A-215ENST00000590696 TMEM265A0A087WTH1 108 aa25.59■■□□□ 1.69
DDX39A-215ENST00000590696 ZNF543Q08ER8 600 aa25.59■■□□□ 1.69
DDX39A-215ENST00000590696 TMEM240Q5SV17 173 aa25.59■■□□□ 1.69
DDX39A-215ENST00000590696 CHD1LQ86WJ1 897 aa25.59■■□□□ 1.69
DDX39A-215ENST00000590696 PLEKHM2Q8IWE5 1019 aa25.59■■□□□ 1.69
DDX39A-215ENST00000590696 RNF41Q9H4P4 317 aaPredicted RBP25.59■■□□□ 1.69
DDX39A-215ENST00000590696 IGHDP01880 384 aa25.58■■□□□ 1.69
DDX39A-215ENST00000590696 DNAJB2P25686 324 aa25.58■■□□□ 1.69
DDX39A-215ENST00000590696 CYP2C18P33260 490 aa25.58■■□□□ 1.69
DDX39A-215ENST00000590696 MAFAQ8NHW3 353 aaPredicted RBP25.58■■□□□ 1.69
DDX39A-215ENST00000590696 CLEC4DQ8WXI8 215 aa25.58■■□□□ 1.69
DDX39A-215ENST00000590696 YTHDC1Q96MU7 727 aaKnown RBP25.58■■□□□ 1.69
DDX39A-215ENST00000590696 GRIN2DO15399 1336 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms