RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 KIF23Q02241 960 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-211ENST00000590239 TMEM132BQ14DG7 1078 aa17.42■□□□□ 0.38
DDX39A-211ENST00000590239 NPY5RQ15761 445 aa17.42■□□□□ 0.38
DDX39A-211ENST00000590239 USH1GQ495M9 461 aa17.42■□□□□ 0.38
DDX39A-211ENST00000590239 MCTP1Q6DN14 999 aa17.42■□□□□ 0.38
DDX39A-211ENST00000590239 CYP4F22Q6NT55 531 aa17.42■□□□□ 0.38
DDX39A-211ENST00000590239 PAXIP1Q6ZW49 1069 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-211ENST00000590239 DIS3L2Q8IYB7 885 aaKnown RBP17.42■□□□□ 0.38
DDX39A-211ENST00000590239 REM2Q8IYK8 340 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-211ENST00000590239 CPXCR1Q8N123 301 aa17.42■□□□□ 0.38
DDX39A-211ENST00000590239 CAPNS2Q96L46 248 aa17.42■□□□□ 0.38
DDX39A-211ENST00000590239 AGBL1Q96MI9 1066 aa17.42■□□□□ 0.38
DDX39A-211ENST00000590239 PARK7Q99497 189 aaKnown RBP17.42■□□□□ 0.38
DDX39A-211ENST00000590239 TEX13BQ9BXU2 312 aa17.42■□□□□ 0.38
DDX39A-211ENST00000590239 FOXP1Q9H334 677 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-211ENST00000590239 ZSCAN16Q9H4T2 348 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-211ENST00000590239 RAVER2Q9HCJ3 691 aaKnown RBP17.42■□□□□ 0.38
DDX39A-211ENST00000590239 RIC8AQ9NPQ8 531 aa17.42■□□□□ 0.38
DDX39A-211ENST00000590239 RABGAP1Q9Y3P9 1069 aa17.42■□□□□ 0.38
DDX39A-211ENST00000590239 F13A1P00488 732 aa17.41■□□□□ 0.38
DDX39A-211ENST00000590239 U2AF2P26368 475 aaKnown RBP eCLIP17.41■□□□□ 0.387e-9■□□□□ 8.7
DDX39A-211ENST00000590239 TM4SF4P48230 202 aa17.41■□□□□ 0.38
DDX39A-211ENST00000590239 GCLCP48506 637 aaPredicted RBP17.41■□□□□ 0.38
DDX39A-211ENST00000590239 RESTQ13127 1097 aa17.41■□□□□ 0.38
DDX39A-211ENST00000590239 TKFCQ3LXA3 575 aa17.41■□□□□ 0.38
DDX39A-211ENST00000590239 POTEEQ6S8J3 1075 aa17.41■□□□□ 0.38
DDX39A-211ENST00000590239 IFNL1Q8IU54 200 aa17.41■□□□□ 0.38
DDX39A-211ENST00000590239 BLIDQ8IZY5 108 aa17.41■□□□□ 0.38
DDX39A-211ENST00000590239 CUL5Q93034 780 aa17.41■□□□□ 0.38
DDX39A-211ENST00000590239 MAF1Q9H063 256 aa17.41■□□□□ 0.38
DDX39A-211ENST00000590239 PSTPIP2Q9H939 334 aa17.41■□□□□ 0.38
DDX39A-211ENST00000590239 STAT3P40763 770 aa17.4■□□□□ 0.38
DDX39A-211ENST00000590239 GNL2Q13823 731 aaKnown RBP17.4■□□□□ 0.38
DDX39A-211ENST00000590239 MCTP2Q6DN12 878 aa17.4■□□□□ 0.38
DDX39A-211ENST00000590239 SNRNP48Q6IEG0 339 aaKnown RBP17.4■□□□□ 0.38
DDX39A-211ENST00000590239 BRAPQ7Z569 592 aa17.4■□□□□ 0.38
DDX39A-211ENST00000590239 SMCR8Q8TEV9 937 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-211ENST00000590239 BTBD7Q9P203 1132 aa17.4■□□□□ 0.38
DDX39A-211ENST00000590239 RBPJLQ9UBG7 517 aa17.4■□□□□ 0.38
DDX39A-211ENST00000590239 ATP6V1DQ9Y5K8 247 aa17.4■□□□□ 0.38
DDX39A-211ENST00000590239 BTBD18B2RXH4 712 aa17.39■□□□□ 0.37
DDX39A-211ENST00000590239 M0R2N6 131 aa17.39■□□□□ 0.37
DDX39A-211ENST00000590239 IGF2BP3O00425 579 aaKnown RBP eCLIP17.39■□□□□ 0.37
DDX39A-211ENST00000590239 CYP2C8P10632 490 aa17.39■□□□□ 0.37
DDX39A-211ENST00000590239 ALAS1P13196 640 aa17.39■□□□□ 0.37
DDX39A-211ENST00000590239 COPB2P35606 906 aa17.39■□□□□ 0.37
DDX39A-211ENST00000590239 FOXD4L5Q5VV16 416 aaPredicted RBP17.39■□□□□ 0.37
DDX39A-211ENST00000590239 FERMT3Q86UX7 667 aa17.39■□□□□ 0.37
DDX39A-211ENST00000590239 MCF2L2Q86YR7 1114 aa17.39■□□□□ 0.37
DDX39A-211ENST00000590239 RIOX2Q8IUF8 465 aa17.39■□□□□ 0.37
DDX39A-211ENST00000590239 NOSTRINQ8IVI9 506 aa17.39■□□□□ 0.37
DDX39A-211ENST00000590239 REXO1Q8N1G1 1221 aaKnown RBP17.39■□□□□ 0.37
DDX39A-211ENST00000590239 SAMD3Q8N6K7 520 aa17.39■□□□□ 0.37
DDX39A-211ENST00000590239 OXER1Q8TDS5 423 aa17.39■□□□□ 0.37
DDX39A-211ENST00000590239 CLEC4DQ8WXI8 215 aa17.39■□□□□ 0.37
DDX39A-211ENST00000590239 FOXD4L4Q8WXT5 416 aaPredicted RBP17.39■□□□□ 0.37
DDX39A-211ENST00000590239 COL11A1P12107 1806 aaPredicted RBP17.38■□□□□ 0.37
DDX39A-211ENST00000590239 PIK3CDO00329 1044 aa17.38■□□□□ 0.37
DDX39A-211ENST00000590239 OPLAHO14841 1288 aa17.38■□□□□ 0.37
DDX39A-211ENST00000590239 CNMDO75829 334 aa17.38■□□□□ 0.37
DDX39A-211ENST00000590239 GHRHRQ02643 423 aa17.38■□□□□ 0.37
DDX39A-211ENST00000590239 PLS1Q14651 629 aa17.38■□□□□ 0.37
DDX39A-211ENST00000590239 TNFRSF25Q93038 417 aa17.38■□□□□ 0.37
DDX39A-211ENST00000590239 SPATC1LQ9H0A9 340 aa17.38■□□□□ 0.37
DDX39A-211ENST00000590239 RNF146Q9NTX7 359 aa17.38■□□□□ 0.37
DDX39A-211ENST00000590239 MAP3K20Q9NYL2 800 aaKnown RBP17.38■□□□□ 0.37
DDX39A-211ENST00000590239 MORF4L1Q9UBU8 362 aa17.38■□□□□ 0.37
DDX39A-211ENST00000590239 KIF28PB7ZC32 967 aa17.37■□□□□ 0.37
DDX39A-211ENST00000590239 SLC25A27O95847 323 aa17.37■□□□□ 0.37
DDX39A-211ENST00000590239 TAL1P17542 331 aaPredicted RBP17.37■□□□□ 0.37
DDX39A-211ENST00000590239 GRM1Q13255 1194 aa17.37■□□□□ 0.37
DDX39A-211ENST00000590239 NR5A1Q13285 461 aa17.37■□□□□ 0.37
DDX39A-211ENST00000590239 KRT25Q7Z3Z0 450 aa17.37■□□□□ 0.37
DDX39A-211ENST00000590239 CHST13Q8NET6 341 aa17.37■□□□□ 0.37
DDX39A-211ENST00000590239 TRERF1Q96PN7 1200 aa17.37■□□□□ 0.37
DDX39A-211ENST00000590239 PAGR1Q9BTK6 254 aa17.37■□□□□ 0.37
DDX39A-211ENST00000590239 TXNRD2Q9NNW7 524 aa17.37■□□□□ 0.37
DDX39A-211ENST00000590239 FBXO40Q9UH90 709 aa17.37■□□□□ 0.37
DDX39A-211ENST00000590239 PCDHA6Q9UN73 950 aa17.37■□□□□ 0.37
DDX39A-211ENST00000590239 RIPK3Q9Y572 518 aa17.37■□□□□ 0.37
DDX39A-211ENST00000590239 PCDHA8Q9Y5H6 950 aa17.37■□□□□ 0.37
DDX39A-211ENST00000590239 GCOM1H8Y6P7 765 aaPredicted RBP17.36■□□□□ 0.37
DDX39A-211ENST00000590239 MEIS2O14770 477 aa17.36■□□□□ 0.37
DDX39A-211ENST00000590239 ADAMTS3O15072 1205 aa17.36■□□□□ 0.37
DDX39A-211ENST00000590239 ALDH1A1P00352 501 aa17.36■□□□□ 0.37
DDX39A-211ENST00000590239 FOSP01100 380 aaPredicted RBP17.36■□□□□ 0.37
DDX39A-211ENST00000590239 POLR2MP0CAP2 368 aa17.36■□□□□ 0.37
DDX39A-211ENST00000590239 MAP2K2P36507 400 aa17.36■□□□□ 0.37
DDX39A-211ENST00000590239 CLK2P49760 499 aaKnown RBP17.36■□□□□ 0.37
DDX39A-211ENST00000590239 ERVK-9P63128 1117 aa17.36■□□□□ 0.37
DDX39A-211ENST00000590239 ERVK-24P63145 666 aa17.36■□□□□ 0.37
DDX39A-211ENST00000590239 TAF1CQ15572 869 aaPredicted RBP17.36■□□□□ 0.37
DDX39A-211ENST00000590239 SHCBP1Q8NEM2 672 aa17.36■□□□□ 0.37
DDX39A-211ENST00000590239 GPRC5AQ8NFJ5 357 aa17.36■□□□□ 0.37
DDX39A-211ENST00000590239 TNPO1Q92973 898 aaKnown RBP17.36■□□□□ 0.37
DDX39A-211ENST00000590239 ZIC5Q96T25 663 aa17.36■□□□□ 0.37
DDX39A-211ENST00000590239 MOV10L1Q9BXT6 1211 aaKnown RBP17.36■□□□□ 0.37
DDX39A-211ENST00000590239 ACAD9Q9H845 621 aa17.36■□□□□ 0.37
DDX39A-211ENST00000590239 HOMER2Q9NSB8 354 aa17.36■□□□□ 0.37
DDX39A-211ENST00000590239 ADGRA2Q96PE1 1338 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms