RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 GOLGA6L3A6NEY3 463 aa13□□□□□ -0.33
SMAD4-205ENST00000588745 KINO60870 393 aaKnown RBP13□□□□□ -0.33
SMAD4-205ENST00000588745 MCM7P33993 719 aa13□□□□□ -0.33
SMAD4-205ENST00000588745 IREB2P48200 963 aaKnown RBP13□□□□□ -0.33
SMAD4-205ENST00000588745 NDUFA8P51970 172 aa13□□□□□ -0.33
SMAD4-205ENST00000588745 PTGDRQ13258 359 aa13□□□□□ -0.33
SMAD4-205ENST00000588745 VGLL4Q14135 290 aa13□□□□□ -0.33
SMAD4-205ENST00000588745 UBE2SQ16763 222 aa13□□□□□ -0.33
SMAD4-205ENST00000588745 PPP1R3FQ6ZSY5 799 aaPredicted RBP13□□□□□ -0.33
SMAD4-205ENST00000588745 ZNF579Q8NAF0 562 aaKnown RBP13□□□□□ -0.33
SMAD4-205ENST00000588745 TBCKQ8TEA7 893 aa13□□□□□ -0.33
SMAD4-205ENST00000588745 TANGO6Q9C0B7 1094 aa13□□□□□ -0.33
SMAD4-205ENST00000588745 TNMDQ9H2S6 317 aa13□□□□□ -0.33
SMAD4-205ENST00000588745 HPSEQ9Y251 543 aa13□□□□□ -0.33
SMAD4-205ENST00000588745 ZHX2Q9Y6X8 837 aa13□□□□□ -0.33
SMAD4-205ENST00000588745 PTPRFP10586 1907 aa13□□□□□ -0.33
SMAD4-205ENST00000588745 C19orf81C9J6K1 198 aa12.99□□□□□ -0.33
SMAD4-205ENST00000588745 GRIN1Q05586 938 aa12.99□□□□□ -0.33
SMAD4-205ENST00000588745 AP3B2Q13367 1082 aa12.99□□□□□ -0.33
SMAD4-205ENST00000588745 MAP3K11Q16584 847 aa12.99□□□□□ -0.33
SMAD4-205ENST00000588745 CCDC174Q6PII3 467 aa12.99□□□□□ -0.33
SMAD4-205ENST00000588745 RBM43Q6ZSC3 357 aaKnown RBP12.99□□□□□ -0.33
SMAD4-205ENST00000588745 GAS2L3Q86XJ1 694 aa12.99□□□□□ -0.33
SMAD4-205ENST00000588745 TEX2Q8IWB9 1127 aa12.99□□□□□ -0.33
SMAD4-205ENST00000588745 CSADQ9Y600 493 aa12.99□□□□□ -0.33
SMAD4-205ENST00000588745 LOC285556D6RIA3 1793 aa12.99□□□□□ -0.33
SMAD4-205ENST00000588745 RBBP6Q7Z6E9 1792 aaKnown RBP12.99□□□□□ -0.33
SMAD4-205ENST00000588745 ABCB11O95342 1321 aa12.98□□□□□ -0.33
SMAD4-205ENST00000588745 LAD1O00515 517 aa12.98□□□□□ -0.33
SMAD4-205ENST00000588745 TAL1P17542 331 aaPredicted RBP12.98□□□□□ -0.33
SMAD4-205ENST00000588745 HMGCS2P54868 508 aa12.98□□□□□ -0.33
SMAD4-205ENST00000588745 CAMK4Q16566 473 aa12.98□□□□□ -0.33
SMAD4-205ENST00000588745 LETM2Q2VYF4 491 aa12.98□□□□□ -0.33
SMAD4-205ENST00000588745 ARL6IP4Q66PJ3 421 aaKnown RBP12.98□□□□□ -0.33
SMAD4-205ENST00000588745 MCTP2Q6DN12 878 aa12.98□□□□□ -0.33
SMAD4-205ENST00000588745 C4orf32Q8N8J7 132 aa12.98□□□□□ -0.33
SMAD4-205ENST00000588745 PRPF38AQ8NAV1 312 aaKnown RBP12.98□□□□□ -0.33
SMAD4-205ENST00000588745 CSRNP2Q9H175 543 aa12.98□□□□□ -0.33
SMAD4-205ENST00000588745 RPAP3Q9H6T3 665 aaPredicted RBP12.98□□□□□ -0.33
SMAD4-205ENST00000588745 FAM13BQ9NYF5 915 aa12.98□□□□□ -0.33
SMAD4-205ENST00000588745 PPP1R9AQ9ULJ8 1098 aa12.98□□□□□ -0.33
SMAD4-205ENST00000588745 AFG3L2Q9Y4W6 797 aa12.98□□□□□ -0.33
SMAD4-205ENST00000588745 RLFQ13129 1914 aa12.98□□□□□ -0.33
SMAD4-205ENST00000588745 USP17L15C9J2P7 530 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 USP17L13C9JLJ4 530 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 USP17L11C9JVI0 530 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 USP17L18D6R9N7 530 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 USP17L22D6RA61 530 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 USP17L17D6RBQ6 530 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 USP17L19D6RCP7 530 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 USP17L20D6RJB6 530 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 MEIS2O14770 477 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 OPLAHO14841 1288 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 CTAGE5O15320 804 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 CCNT1O60563 726 aaKnown RBP12.97□□□□□ -0.33
SMAD4-205ENST00000588745 FLOT1O75955 427 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 ICAM1P05362 532 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 SYKP43405 635 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 USP17L24Q0WX57 530 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 SH3D19Q5HYK7 790 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 USP17L6PQ6QN14 398 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 SAMD1Q6SPF0 538 aaPredicted RBP12.97□□□□□ -0.33
SMAD4-205ENST00000588745 RBM46Q8TBY0 533 aaKnown RBP12.97□□□□□ -0.33
SMAD4-205ENST00000588745 ANO3Q9BYT9 981 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 TMOD4Q9NZQ9 345 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 MYH7BA7E2Y1 1941 aa12.97□□□□□ -0.33
SMAD4-205ENST00000588745 ZNF536O15090 1300 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 VWA3AA6NCI4 1184 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 PIK3CDO00329 1044 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 NEMFO60524 1076 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 ZNF202O95125 648 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 FOSP01100 380 aaPredicted RBP12.96□□□□□ -0.33
SMAD4-205ENST00000588745 OR52Z1P0C646 297 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 FDX1P10109 184 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 DEKP35659 375 aaKnown RBP12.96□□□□□ -0.33
SMAD4-205ENST00000588745 PRPHP41219 470 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 TTLL12Q14166 644 aaPredicted RBP12.96□□□□□ -0.33
SMAD4-205ENST00000588745 SPECC1Q5M775 1068 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 L1TD1Q5T7N2 865 aaKnown RBP12.96□□□□□ -0.33
SMAD4-205ENST00000588745 LDHDQ86WU2 507 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 ANKRD13AQ8IZ07 590 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 TIGD1Q96MW7 591 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 NAP1L4Q99733 375 aaKnown RBP12.96□□□□□ -0.33
SMAD4-205ENST00000588745 FUCA2Q9BTY2 467 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 TMEM60Q9H2L4 133 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 TSPY26PQ9H489 355 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 SLC38A10Q9HBR0 1119 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 KCNH3Q9ULD8 1083 aa12.96□□□□□ -0.33
SMAD4-205ENST00000588745 MRPL11Q9Y3B7 192 aaKnown RBP12.96□□□□□ -0.33
SMAD4-205ENST00000588745 SPDYE5A6NIY4 337 aa12.95□□□□□ -0.34
SMAD4-205ENST00000588745 SPDYE3A6NKU9 549 aa12.95□□□□□ -0.34
SMAD4-205ENST00000588745 TDP2O95551 362 aa12.95□□□□□ -0.34
SMAD4-205ENST00000588745 POTEIP0CG38 1075 aa12.95□□□□□ -0.34
SMAD4-205ENST00000588745 POTEJP0CG39 1038 aa12.95□□□□□ -0.34
SMAD4-205ENST00000588745 GCFC2P16383 781 aaKnown RBP12.95□□□□□ -0.34
SMAD4-205ENST00000588745 LONP1P36776 959 aaKnown RBP12.95□□□□□ -0.34
SMAD4-205ENST00000588745 ARMC9Q7Z3E5 817 aa12.95□□□□□ -0.34
SMAD4-205ENST00000588745 POTEDQ86YR6 584 aa12.95□□□□□ -0.34
SMAD4-205ENST00000588745 CKAP2LQ8IYA6 745 aa12.95□□□□□ -0.34
SMAD4-205ENST00000588745 ELP3Q9H9T3 547 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms