RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 MTMR8Q96EF0 704 aa24.89■■□□□ 1.58
RETREG3-204ENST00000586796 RBM28Q9NW13 759 aaKnown RBP24.89■■□□□ 1.58
RETREG3-204ENST00000586796 SLC5A4Q9NY91 659 aa24.89■■□□□ 1.58
RETREG3-204ENST00000586796 NFIBO00712 420 aa24.88■■□□□ 1.57
RETREG3-204ENST00000586796 INHAP05111 366 aa24.88■■□□□ 1.57
RETREG3-204ENST00000586796 NEK4P51957 841 aa24.88■■□□□ 1.57
RETREG3-204ENST00000586796 TRIM32Q13049 653 aa24.88■■□□□ 1.57
RETREG3-204ENST00000586796 RRP36Q96EU6 259 aaKnown RBP24.88■■□□□ 1.57
RETREG3-204ENST00000586796 IL17RAQ96F46 866 aa24.88■■□□□ 1.57
RETREG3-204ENST00000586796 SPZ1Q9BXG8 430 aa24.88■■□□□ 1.57
RETREG3-204ENST00000586796 AMNQ9BXJ7 453 aa24.88■■□□□ 1.57
RETREG3-204ENST00000586796 A1CFQ9NQ94 594 aaKnown RBP24.88■■□□□ 1.57
RETREG3-204ENST00000586796 FLRT1Q9NZU1 646 aa24.88■■□□□ 1.57
RETREG3-204ENST00000586796 hCG_1642624A0A1W2PR95 340 aa24.87■■□□□ 1.57
RETREG3-204ENST00000586796 PPP1R11O60927 126 aaPredicted RBP24.87■■□□□ 1.57
RETREG3-204ENST00000586796 HOXC6P09630 235 aa24.87■■□□□ 1.57
RETREG3-204ENST00000586796 CDC27P30260 824 aa24.87■■□□□ 1.57
RETREG3-204ENST00000586796 CCT2P78371 535 aaKnown RBP24.87■■□□□ 1.57
RETREG3-204ENST00000586796 CLEC4DQ8WXI8 215 aa24.87■■□□□ 1.57
RETREG3-204ENST00000586796 ARMC5Q96C12 935 aa24.87■■□□□ 1.57
RETREG3-204ENST00000586796 ABCB11O95342 1321 aa24.86■■□□□ 1.57
RETREG3-204ENST00000586796 PNMA6FA0A0J9YX94 578 aa24.86■■□□□ 1.57
RETREG3-204ENST00000586796 PTPDC1A2A3K4 754 aa24.86■■□□□ 1.57
RETREG3-204ENST00000586796 HMGCRP04035 888 aa24.86■■□□□ 1.57
RETREG3-204ENST00000586796 SMARCA1P28370 1054 aa24.86■■□□□ 1.57
RETREG3-204ENST00000586796 PDIA3P30101 505 aaKnown RBP24.86■■□□□ 1.57
RETREG3-204ENST00000586796 ADD1P35611 737 aaKnown RBP24.86■■□□□ 1.57
RETREG3-204ENST00000586796 UBXN2AP68543 259 aa24.86■■□□□ 1.57
RETREG3-204ENST00000586796 NOL8Q76FK4 1167 aaKnown RBP24.86■■□□□ 1.57
RETREG3-204ENST00000586796 TRMT44Q8IYL2 757 aaKnown RBP24.86■■□□□ 1.57
RETREG3-204ENST00000586796 ZNF333Q96JL9 665 aa24.86■■□□□ 1.57
RETREG3-204ENST00000586796 FAM217BQ9NTX9 383 aaPredicted RBP24.86■■□□□ 1.57
RETREG3-204ENST00000586796 SEC63Q9UGP8 760 aaKnown RBP24.86■■□□□ 1.57
RETREG3-204ENST00000586796 PCDHA1Q9Y5I3 950 aa24.86■■□□□ 1.57
RETREG3-204ENST00000586796 POTEB2H3BUK9 544 aa24.85■■□□□ 1.57
RETREG3-204ENST00000586796 RCAN1P53805 252 aa24.85■■□□□ 1.57
RETREG3-204ENST00000586796 AK2P54819 239 aa24.85■■□□□ 1.57
RETREG3-204ENST00000586796 STK3Q13188 491 aa24.85■■□□□ 1.57
RETREG3-204ENST00000586796 MTFR1Q15390 333 aa24.85■■□□□ 1.57
RETREG3-204ENST00000586796 ZNF792Q3KQV3 632 aa24.85■■□□□ 1.57
RETREG3-204ENST00000586796 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.85■■□□□ 1.57
RETREG3-204ENST00000586796 MAML3Q96JK9 1138 aa24.85■■□□□ 1.57
RETREG3-204ENST00000586796 BACH2Q9BYV9 841 aa24.85■■□□□ 1.57
RETREG3-204ENST00000586796 MRPL11Q9Y3B7 192 aaKnown RBP24.85■■□□□ 1.57
RETREG3-204ENST00000586796 CAPN15O75808 1086 aa24.84■■□□□ 1.57
RETREG3-204ENST00000586796 CYP2C19P33261 490 aa24.84■■□□□ 1.57
RETREG3-204ENST00000586796 RBM25P49756 843 aaKnown RBP24.84■■□□□ 1.57
RETREG3-204ENST00000586796 EVCP57679 992 aa24.84■■□□□ 1.57
RETREG3-204ENST00000586796 CNTN2Q02246 1040 aa24.84■■□□□ 1.57
RETREG3-204ENST00000586796 BAATQ14032 418 aaPredicted RBP24.84■■□□□ 1.57
RETREG3-204ENST00000586796 MFSD14CQ5VZR4 134 aa24.84■■□□□ 1.57
RETREG3-204ENST00000586796 NCOA5Q9HCD5 579 aaKnown RBP24.84■■□□□ 1.57
RETREG3-204ENST00000586796 CYP39A1Q9NYL5 469 aa24.84■■□□□ 1.57
RETREG3-204ENST00000586796 ZNF236Q9UL36 1845 aa24.84■■□□□ 1.57
RETREG3-204ENST00000586796 PFASO15067 1338 aa24.84■■□□□ 1.57
RETREG3-204ENST00000586796 DNAJC25-GNG10A0A024R161 153 aa24.83■■□□□ 1.57
RETREG3-204ENST00000586796 CCDC196A0A1B0GTZ2 297 aa24.83■■□□□ 1.57
RETREG3-204ENST00000586796 CALML3P27482 149 aa24.83■■□□□ 1.57
RETREG3-204ENST00000586796 RNF207Q6ZRF8 634 aa24.83■■□□□ 1.57
RETREG3-204ENST00000586796 PURBQ96QR8 312 aaKnown RBP24.83■■□□□ 1.57
RETREG3-204ENST00000586796 SMCHD1A6NHR9 2005 aa24.82■■□□□ 1.56
RETREG3-204ENST00000586796 PRKAR2AP13861 404 aaKnown RBP24.82■■□□□ 1.56
RETREG3-204ENST00000586796 PPP2R5BQ15173 497 aa24.82■■□□□ 1.56
RETREG3-204ENST00000586796 ANKRD1Q15327 319 aa24.82■■□□□ 1.56
RETREG3-204ENST00000586796 OLFML2BQ68BL8 750 aa24.82■■□□□ 1.56
RETREG3-204ENST00000586796 SLC30A10Q6XR72 485 aa24.82■■□□□ 1.56
RETREG3-204ENST00000586796 TBC1D5Q92609 795 aa24.82■■□□□ 1.56
RETREG3-204ENST00000586796 ZNF274Q96GC6 653 aaPredicted RBP24.82■■□□□ 1.56
RETREG3-204ENST00000586796 KIF2CQ99661 725 aa24.82■■□□□ 1.56
RETREG3-204ENST00000586796 UNC93B1Q9H1C4 597 aa24.82■■□□□ 1.56
RETREG3-204ENST00000586796 ALDH8A1Q9H2A2 487 aaPredicted RBP24.82■■□□□ 1.56
RETREG3-204ENST00000586796 DIS3Q9Y2L1 958 aaKnown RBP24.82■■□□□ 1.56
RETREG3-204ENST00000586796 CNTNAP5Q8WYK1 1306 aa24.82■■□□□ 1.56
RETREG3-204ENST00000586796 PPFIA3O75145 1194 aa24.81■■□□□ 1.56
RETREG3-204ENST00000586796 CCL5P13501 91 aa24.81■■□□□ 1.56
RETREG3-204ENST00000586796 CACNB2Q08289 660 aaPredicted RBP24.81■■□□□ 1.56
RETREG3-204ENST00000586796 TRAF1Q13077 416 aa24.81■■□□□ 1.56
RETREG3-204ENST00000586796 RNF208Q9H0X6 261 aa24.81■■□□□ 1.56
RETREG3-204ENST00000586796 TPCN1Q9ULQ1 816 aa24.81■■□□□ 1.56
RETREG3-204ENST00000586796 V9GY48 417 aaPredicted RBP24.81■■□□□ 1.56
RETREG3-204ENST00000586796 HTTP42858 3142 aa24.81■■□□□ 1.56
RETREG3-204ENST00000586796 ZNFX1Q9P2E3 1918 aaKnown RBP24.8■■□□□ 1.56
RETREG3-204ENST00000586796 BAZ2BQ9UIF8 2168 aaKnown RBP24.8■■□□□ 1.56
RETREG3-204ENST00000586796 SOWAHBA6NEL2 793 aa24.8■■□□□ 1.56
RETREG3-204ENST00000586796 RPS6P62753 249 aaKnown RBP24.8■■□□□ 1.56
RETREG3-204ENST00000586796 FUT2Q10981 343 aa24.8■■□□□ 1.56
RETREG3-204ENST00000586796 MCF2L2Q86YR7 1114 aa24.8■■□□□ 1.56
RETREG3-204ENST00000586796 FAM133AQ8N9E0 248 aa24.8■■□□□ 1.56
RETREG3-204ENST00000586796 TMEM106CQ9BVX2 250 aa24.8■■□□□ 1.56
RETREG3-204ENST00000586796 CFBP00751 764 aa24.79■■□□□ 1.56
RETREG3-204ENST00000586796 SOX10P56693 466 aa24.79■■□□□ 1.56
RETREG3-204ENST00000586796 PRAMEF19Q5SWL8 479 aa24.79■■□□□ 1.56
RETREG3-204ENST00000586796 HEATR3Q7Z4Q2 680 aa24.79■■□□□ 1.56
RETREG3-204ENST00000586796 FGD4Q96M96 766 aa24.79■■□□□ 1.56
RETREG3-204ENST00000586796 TINF2Q9BSI4 451 aa24.79■■□□□ 1.56
RETREG3-204ENST00000586796 SLKQ9H2G2 1235 aaPredicted RBP24.79■■□□□ 1.56
RETREG3-204ENST00000586796 NID2Q14112 1375 aa24.79■■□□□ 1.56
RETREG3-204ENST00000586796 MYH6P13533 1939 aa24.78■■□□□ 1.56
RETREG3-204ENST00000586796 GPKOWQ92917 476 aaPredicted RBP eCLIP24.78■■□□□ 1.56
RETREG3-204ENST00000586796 PHKBQ93100 1093 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms