RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 SPRED2Q7Z698 418 aa12.22□□□□□ -0.45
GGA3-219ENST00000584550 TLK2Q86UE8 772 aa12.22□□□□□ -0.45
GGA3-219ENST00000584550 ERC1Q8IUD2 1116 aa12.22□□□□□ -0.45
GGA3-219ENST00000584550 PRPF38AQ8NAV1 312 aaKnown RBP12.22□□□□□ -0.45
GGA3-219ENST00000584550 AGBL1Q96MI9 1066 aa12.22□□□□□ -0.45
GGA3-219ENST00000584550 AP5M1Q9H0R1 490 aa12.22□□□□□ -0.45
GGA3-219ENST00000584550 TRMT13Q9NUP7 481 aaKnown RBP12.22□□□□□ -0.45
GGA3-219ENST00000584550 MUC6Q6W4X9 2439 aa12.22□□□□□ -0.45
GGA3-219ENST00000584550 F5H6K3 240 aa12.21□□□□□ -0.45
GGA3-219ENST00000584550 CABYRO75952 493 aa12.21□□□□□ -0.45
GGA3-219ENST00000584550 CHGBP05060 677 aa12.21□□□□□ -0.45
GGA3-219ENST00000584550 MRE11P49959 708 aa12.21□□□□□ -0.45
GGA3-219ENST00000584550 TAP1Q03518 808 aa12.21□□□□□ -0.45
GGA3-219ENST00000584550 KLRC3Q07444 240 aa12.21□□□□□ -0.45
GGA3-219ENST00000584550 GRB10Q13322 594 aa12.21□□□□□ -0.45
GGA3-219ENST00000584550 C16orf86Q6ZW13 317 aa12.21□□□□□ -0.45
GGA3-219ENST00000584550 EEPD1Q7L9B9 569 aa12.21□□□□□ -0.45
GGA3-219ENST00000584550 AMOTL1Q8IY63 956 aa12.21□□□□□ -0.45
GGA3-219ENST00000584550 RHPN1Q8TCX5 695 aa12.21□□□□□ -0.45
GGA3-219ENST00000584550 PPP1R13LQ8WUF5 828 aa12.21□□□□□ -0.45
GGA3-219ENST00000584550 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.21□□□□□ -0.45
GGA3-219ENST00000584550 PDGFCQ9NRA1 345 aa12.21□□□□□ -0.45
GGA3-219ENST00000584550 ATP8A2Q9NTI2 1148 aa12.21□□□□□ -0.45
GGA3-219ENST00000584550 GNEQ9Y223 722 aaKnown RBP12.21□□□□□ -0.45
GGA3-219ENST00000584550 PCDHB15Q9Y5E8 787 aa12.21□□□□□ -0.45
GGA3-219ENST00000584550 NDUFB10O96000 172 aa12.2□□□□□ -0.46
GGA3-219ENST00000584550 SMPD1P17405 629 aa12.2□□□□□ -0.46
GGA3-219ENST00000584550 IRX6P78412 446 aaPredicted RBP12.2□□□□□ -0.46
GGA3-219ENST00000584550 CHMP4CQ96CF2 233 aa12.2□□□□□ -0.46
GGA3-219ENST00000584550 SOWAHBA6NEL2 793 aa12.19□□□□□ -0.46
GGA3-219ENST00000584550 ZEB2O60315 1214 aa12.19□□□□□ -0.46
GGA3-219ENST00000584550 RAB11FIP3O75154 756 aa12.19□□□□□ -0.46
GGA3-219ENST00000584550 NKX3-2P78367 333 aa12.19□□□□□ -0.46
GGA3-219ENST00000584550 CTR9Q6PD62 1173 aa12.19□□□□□ -0.46
GGA3-219ENST00000584550 EXOC6Q8TAG9 804 aa12.19□□□□□ -0.46
GGA3-219ENST00000584550 KIF1BPQ96EK5 621 aa12.19□□□□□ -0.46
GGA3-219ENST00000584550 FTOQ9C0B1 505 aaKnown RBP eCLIP12.19□□□□□ -0.46
GGA3-219ENST00000584550 ALDH8A1Q9H2A2 487 aaPredicted RBP12.19□□□□□ -0.46
GGA3-219ENST00000584550 SLC38A10Q9HBR0 1119 aa12.19□□□□□ -0.46
GGA3-219ENST00000584550 CLIP2Q9UDT6 1046 aa12.19□□□□□ -0.46
GGA3-219ENST00000584550 SLC4A4Q9Y6R1 1079 aa12.19□□□□□ -0.46
GGA3-219ENST00000584550 ATP2A1O14983 1001 aa12.18□□□□□ -0.46
GGA3-219ENST00000584550 LPXNO60711 386 aa12.18□□□□□ -0.46
GGA3-219ENST00000584550 ACTN1P12814 892 aa12.18□□□□□ -0.46
GGA3-219ENST00000584550 TMCO2Q7Z6W1 182 aaPredicted RBP12.18□□□□□ -0.46
GGA3-219ENST00000584550 HERC6Q8IVU3 1022 aa12.18□□□□□ -0.46
GGA3-219ENST00000584550 FBXO16Q8IX29 292 aaPredicted RBP12.18□□□□□ -0.46
GGA3-219ENST00000584550 CLASRPQ8N2M8 674 aaKnown RBP12.18□□□□□ -0.46
GGA3-219ENST00000584550 CHST13Q8NET6 341 aa12.18□□□□□ -0.46
GGA3-219ENST00000584550 GDPD5Q8WTR4 605 aa12.18□□□□□ -0.46
GGA3-219ENST00000584550 DDRGK1Q96HY6 314 aa12.18□□□□□ -0.46
GGA3-219ENST00000584550 SLC9A7Q96T83 725 aa12.18□□□□□ -0.46
GGA3-219ENST00000584550 FBXO40Q9UH90 709 aa12.18□□□□□ -0.46
GGA3-219ENST00000584550 MTUS1Q9ULD2 1270 aa12.18□□□□□ -0.46
GGA3-219ENST00000584550 ISY1Q9ULR0 285 aaKnown RBP12.18□□□□□ -0.46
GGA3-219ENST00000584550 PIEZO1Q92508 2521 aa12.17□□□□□ -0.46
GGA3-219ENST00000584550 TNKSO95271 1327 aa12.17□□□□□ -0.46
GGA3-219ENST00000584550 COL4A4P53420 1690 aaPredicted RBP12.17□□□□□ -0.46
GGA3-219ENST00000584550 LCHNA4D1U4 455 aa12.17□□□□□ -0.46
GGA3-219ENST00000584550 PRR33A8MZF0 331 aa12.17□□□□□ -0.46
GGA3-219ENST00000584550 KIF28PB7ZC32 967 aa12.17□□□□□ -0.46
GGA3-219ENST00000584550 RBAK-RBAKDNI3L0D1 243 aa12.17□□□□□ -0.46
GGA3-219ENST00000584550 SMARCA5O60264 1052 aaPredicted RBP12.17□□□□□ -0.46
GGA3-219ENST00000584550 PFKMP08237 780 aa12.17□□□□□ -0.46
GGA3-219ENST00000584550 IFIT2P09913 472 aaKnown RBP12.17□□□□□ -0.46
GGA3-219ENST00000584550 SSTR3P32745 418 aaPredicted RBP12.17□□□□□ -0.46
GGA3-219ENST00000584550 ADD2P35612 726 aa12.17□□□□□ -0.46
GGA3-219ENST00000584550 CSPP1Q1MSJ5 1256 aa12.17□□□□□ -0.46
GGA3-219ENST00000584550 FAM47CQ5HY64 1035 aa12.17□□□□□ -0.46
GGA3-219ENST00000584550 GJD3Q8N144 294 aa12.17□□□□□ -0.46
GGA3-219ENST00000584550 FAM133AQ8N9E0 248 aa12.17□□□□□ -0.46
GGA3-219ENST00000584550 PURBQ96QR8 312 aaKnown RBP12.17□□□□□ -0.46
GGA3-219ENST00000584550 MKNK2Q9HBH9 465 aa12.17□□□□□ -0.46
GGA3-219ENST00000584550 MYH4Q9Y623 1939 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 ASB14A6NK59 587 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 MYL3P08590 195 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 SUPT20HL2P0C7V6 817 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 RASA1P20936 1047 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 SNAP25P60880 206 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 IQSEC1Q6DN90 963 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 TAPT1Q6NXT6 567 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 KIAA1211Q6ZU35 1233 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 PHOSPHO2Q8TCD6 241 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 SNX27Q96L92 541 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 SEZ6LQ9BYH1 1024 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 LRRCC1Q9C099 1032 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 BOLA2Q9H3K6 86 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 ACAD9Q9H845 621 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 A1CFQ9NQ94 594 aaKnown RBP12.16□□□□□ -0.46
GGA3-219ENST00000584550 RNF146Q9NTX7 359 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 PAG1Q9NWQ8 432 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 NYAP2Q9P242 653 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 FEM1BQ9UK73 627 aa12.16□□□□□ -0.46
GGA3-219ENST00000584550 MINDY4BA8MYZ0 360 aa12.15□□□□□ -0.46
GGA3-219ENST00000584550 IQCF3P0C7M6 154 aa12.15□□□□□ -0.46
GGA3-219ENST00000584550 IL9P15248 144 aa12.15□□□□□ -0.46
GGA3-219ENST00000584550 KCNA5P22460 613 aa12.15□□□□□ -0.46
GGA3-219ENST00000584550 CHMP4BP1P59074 171 aa12.15□□□□□ -0.46
GGA3-219ENST00000584550 NHLH1Q02575 133 aa12.15□□□□□ -0.46
GGA3-219ENST00000584550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms