RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 XDHP47989 1333 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 ANKRD18BA2A2Z9 1011 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 RNF40O75150 1001 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 ALDH1L1O75891 902 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 SASH1O94885 1247 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 FSBPO95073 299 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 PTH1RQ03431 593 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 PTPN12Q05209 780 aaKnown RBP8.4□□□□□ -1.06
TVP23C-208ENST00000581273 STIM1Q13586 685 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 TRIM14Q14142 442 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 ADCK5Q3MIX3 580 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 LRIT3Q3SXY7 679 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 FILIP1LQ4L180 1135 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 KIAA1328Q86T90 577 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 OGFOD1Q8N543 542 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 OTUD6BQ8N6M0 293 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 TRIML1Q8N9V2 468 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 PRPF38AQ8NAV1 312 aaKnown RBP8.4□□□□□ -1.06
TVP23C-208ENST00000581273 SLAIN1Q8ND83 568 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 CTAGE1Q96RT6 745 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 GMLQ99445 158 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 NAPGQ99747 312 aaPredicted RBP8.4□□□□□ -1.06
TVP23C-208ENST00000581273 PHAXQ9H814 394 aaKnown RBP8.4□□□□□ -1.06
TVP23C-208ENST00000581273 ACTR5Q9H9F9 607 aaPredicted RBP8.4□□□□□ -1.06
TVP23C-208ENST00000581273 ABCB6Q9NP58 842 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 TUBE1Q9UJT0 475 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 FAM169AQ9Y6X4 670 aa8.4□□□□□ -1.06
TVP23C-208ENST00000581273 MUC6Q6W4X9 2439 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 AKR1B15C9JRZ8 316 aaPredicted RBP8.39□□□□□ -1.07
TVP23C-208ENST00000581273 SPTLC2O15270 562 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 GPR37O15354 613 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 ZEB2O60315 1214 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 PDE8AO60658 829 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 EZRP15311 586 aaKnown RBP8.39□□□□□ -1.07
TVP23C-208ENST00000581273 GCFC2P16383 781 aaKnown RBP8.39□□□□□ -1.07
TVP23C-208ENST00000581273 ATP2B4P23634 1241 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 SLC8A1P32418 973 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 ELF1P32519 619 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 ADD1P35611 737 aaKnown RBP8.39□□□□□ -1.07
TVP23C-208ENST00000581273 SARNPP82979 210 aaKnown RBP8.39□□□□□ -1.07
TVP23C-208ENST00000581273 SREBF2Q12772 1141 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 TBX2Q13207 712 aaPredicted RBP8.39□□□□□ -1.07
TVP23C-208ENST00000581273 TRIM28Q13263 835 aaKnown RBP8.39□□□□□ -1.07
TVP23C-208ENST00000581273 TOB2Q14106 344 aaPredicted RBP8.39□□□□□ -1.07
TVP23C-208ENST00000581273 NCAPHQ15003 741 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 SART3Q15020 963 aaKnown RBP8.39□□□□□ -1.07
TVP23C-208ENST00000581273 KANK3Q6NY19 840 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 FAM173BQ6P4H8 233 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 ARMC9Q7Z3E5 817 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 GPIHBP1Q8IV16 184 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 CNGA4Q8IV77 575 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 TEX11Q8IYF3 940 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 MLKLQ8NB16 471 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 C3orf20Q8ND61 904 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 P3H4Q92791 437 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 DHX58Q96C10 678 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 ZNF274Q96GC6 653 aaPredicted RBP8.39□□□□□ -1.07
TVP23C-208ENST00000581273 GDF15Q99988 308 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 PAGR1Q9BTK6 254 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 USP44Q9H0E7 712 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 GOLPH3LQ9H4A5 285 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 BICC1Q9H694 974 aaKnown RBP8.39□□□□□ -1.07
TVP23C-208ENST00000581273 ANKZF1Q9H8Y5 726 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 BATF3Q9NR55 127 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 CWC25Q9NXE8 425 aaPredicted RBP8.39□□□□□ -1.07
TVP23C-208ENST00000581273 ANGEL1Q9UNK9 670 aaKnown RBP8.39□□□□□ -1.07
TVP23C-208ENST00000581273 FZD1Q9UP38 647 aa8.39□□□□□ -1.07
TVP23C-208ENST00000581273 CDH23Q9H251 3354 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 GOLGA6CA6NDK9 693 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 GRXCR2A6NFK2 248 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 F6X3S4 739 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 PPFIA3O75145 1194 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 ZNF202O95125 648 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 MAP4K4O95819 1239 aaPredicted RBP8.38□□□□□ -1.07
TVP23C-208ENST00000581273 GOLGA6DP0CG33 693 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 CPA1P15085 419 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 MRPL12P52815 198 aaKnown RBP8.38□□□□□ -1.07
TVP23C-208ENST00000581273 MTFR1Q15390 333 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 DPCR1Q3MIW9 517 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 PREPLQ4J6C6 727 aaPredicted RBP8.38□□□□□ -1.07
TVP23C-208ENST00000581273 ALS2CLQ60I27 953 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 PODNQ7Z5L7 613 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 UBE2Q1Q7Z7E8 422 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 TMTC1Q8IUR5 882 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 PDILTQ8N807 584 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 ZBTB9Q96C00 473 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 USP28Q96RU2 1077 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 RUFY1Q96T51 708 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 FSD1Q9BTV5 496 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 CAPS2Q9BXY5 557 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 IL25Q9H293 177 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 GOLGA6AQ9NYA3 693 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 PCDHA7Q9UN72 937 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 ALPK3Q96L96 1907 aa8.38□□□□□ -1.07
TVP23C-208ENST00000581273 MED23Q9ULK4 1368 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 FAM237AA0A1B0GTK4 181 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 PTPDC1A2A3K4 754 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 GOLIM4O00461 696 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 WNT10BO00744 389 aa8.37□□□□□ -1.07
TVP23C-208ENST00000581273 EIF3HO15372 352 aaKnown RBP eCLIP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms