RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 SNAP25P60880 206 aa21.96■■□□□ 1.11
PKD1-230ENST00000565639 GRIN1Q05586 938 aa21.96■■□□□ 1.11
PKD1-230ENST00000565639 SPP2Q13103 211 aa21.96■■□□□ 1.11
PKD1-230ENST00000565639 MTMR2Q13614 643 aa21.96■■□□□ 1.11
PKD1-230ENST00000565639 KIFC2Q96AC6 838 aa21.96■■□□□ 1.11
PKD1-230ENST00000565639 CSRNP2Q9H175 543 aa21.96■■□□□ 1.11
PKD1-230ENST00000565639 EMILIN3Q9NT22 766 aa21.96■■□□□ 1.11
PKD1-230ENST00000565639 KCNH3Q9ULD8 1083 aa21.96■■□□□ 1.11
PKD1-230ENST00000565639 FZD1Q9UP38 647 aa21.96■■□□□ 1.11
PKD1-230ENST00000565639 C19orf81C9J6K1 198 aa21.95■■□□□ 1.1
PKD1-230ENST00000565639 PPP1R12BO60237 982 aaPredicted RBP21.95■■□□□ 1.1
PKD1-230ENST00000565639 UBE2SQ16763 222 aa21.95■■□□□ 1.1
PKD1-230ENST00000565639 PRPF38AQ8NAV1 312 aaKnown RBP21.95■■□□□ 1.1
PKD1-230ENST00000565639 C12orf42Q96LP6 360 aa21.95■■□□□ 1.1
PKD1-230ENST00000565639 TAF1DQ9H5J8 278 aaPredicted RBP21.95■■□□□ 1.1
PKD1-230ENST00000565639 ZHX2Q9Y6X8 837 aa21.95■■□□□ 1.1
PKD1-230ENST00000565639 CCDC192P0DO97 292 aa21.94■■□□□ 1.1
PKD1-230ENST00000565639 PRPHP41219 470 aa21.94■■□□□ 1.1
PKD1-230ENST00000565639 MAP3K9P80192 1104 aa21.94■■□□□ 1.1
PKD1-230ENST00000565639 AP3B2Q13367 1082 aa21.94■■□□□ 1.1
PKD1-230ENST00000565639 LETM2Q2VYF4 491 aa21.94■■□□□ 1.1
PKD1-230ENST00000565639 USH1GQ495M9 461 aa21.94■■□□□ 1.1
PKD1-230ENST00000565639 SLF1Q9BQI6 1058 aa21.94■■□□□ 1.1
PKD1-230ENST00000565639 SDF4Q9BRK5 362 aa21.94■■□□□ 1.1
PKD1-230ENST00000565639 FBXO28Q9NVF7 368 aa21.94■■□□□ 1.1
PKD1-230ENST00000565639 PHIPQ8WWQ0 1821 aa21.94■■□□□ 1.1
PKD1-230ENST00000565639 WDR90Q96KV7 1748 aa21.94■■□□□ 1.1
PKD1-230ENST00000565639 VCAM1P19320 739 aa21.94■■□□□ 1.1
PKD1-230ENST00000565639 PNMA8AQ86V59 439 aaPredicted RBP21.94■■□□□ 1.1
PKD1-230ENST00000565639 CKAP2LQ8IYA6 745 aa21.94■■□□□ 1.1
PKD1-230ENST00000565639 MEIS2O14770 477 aa21.93■■□□□ 1.1
PKD1-230ENST00000565639 CCNT1O60563 726 aaKnown RBP21.93■■□□□ 1.1
PKD1-230ENST00000565639 VWA3AA6NCI4 1184 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 NF2P35240 595 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 LONP1P36776 959 aaKnown RBP21.92■■□□□ 1.1
PKD1-230ENST00000565639 SPECC1Q5M775 1068 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.92■■□□□ 1.1
PKD1-230ENST00000565639 ELOA2Q8IYF1 753 aaPredicted RBP21.92■■□□□ 1.1
PKD1-230ENST00000565639 PAPPA2Q9BXP8 1791 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 POTECB2RU33 542 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 USP17L15C9J2P7 530 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 USP17L13C9JLJ4 530 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 USP17L11C9JVI0 530 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 USP17L18D6R9N7 530 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 USP17L22D6RA61 530 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 USP17L17D6RBQ6 530 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 USP17L19D6RCP7 530 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 USP17L20D6RJB6 530 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 PIK3CDO00329 1044 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 FOSP01100 380 aaPredicted RBP21.92■■□□□ 1.1
PKD1-230ENST00000565639 IREB2P48200 963 aaKnown RBP21.92■■□□□ 1.1
PKD1-230ENST00000565639 USP17L24Q0WX57 530 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 USP17L6PQ6QN14 398 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 NAP1L4Q99733 375 aaKnown RBP21.92■■□□□ 1.1
PKD1-230ENST00000565639 RBSNQ9H1K0 784 aa21.92■■□□□ 1.1
PKD1-230ENST00000565639 NEMFO60524 1076 aa21.91■■□□□ 1.1
PKD1-230ENST00000565639 FDX1P10109 184 aa21.91■■□□□ 1.1
PKD1-230ENST00000565639 PRKG1Q13976 671 aa21.91■■□□□ 1.1
PKD1-230ENST00000565639 PPP4R3AQ6IN85 833 aa21.91■■□□□ 1.1
PKD1-230ENST00000565639 CCDC174Q6PII3 467 aa21.91■■□□□ 1.1
PKD1-230ENST00000565639 DLK2Q6UY11 383 aa21.91■■□□□ 1.1
PKD1-230ENST00000565639 CDCA5Q96FF9 252 aa21.91■■□□□ 1.1
PKD1-230ENST00000565639 TANGO6Q9C0B7 1094 aa21.91■■□□□ 1.1
PKD1-230ENST00000565639 TMEM60Q9H2L4 133 aa21.91■■□□□ 1.1
PKD1-230ENST00000565639 RPAP3Q9H6T3 665 aaPredicted RBP21.91■■□□□ 1.1
PKD1-230ENST00000565639 MRPL11Q9Y3B7 192 aaKnown RBP21.91■■□□□ 1.1
PKD1-230ENST00000565639 AFG3L2Q9Y4W6 797 aa21.91■■□□□ 1.1
PKD1-230ENST00000565639 SNCAIPQ9Y6H5 919 aa21.91■■□□□ 1.1
PKD1-230ENST00000565639 OPLAHO14841 1288 aa21.9■■□□□ 1.1
PKD1-230ENST00000565639 XRCC6P12956 609 aaKnown RBP eCLIP21.9■■□□□ 1.1
PKD1-230ENST00000565639 VGLL4Q14135 290 aa21.9■■□□□ 1.1
PKD1-230ENST00000565639 IL17AQ16552 155 aa21.9■■□□□ 1.1
PKD1-230ENST00000565639 SASS6Q6UVJ0 657 aa21.9■■□□□ 1.1
PKD1-230ENST00000565639 DTHD1Q6ZMT9 781 aa21.9■■□□□ 1.1
PKD1-230ENST00000565639 PNMA2Q9UL42 364 aa21.9■■□□□ 1.1
PKD1-230ENST00000565639 PPP1R9AQ9ULJ8 1098 aa21.9■■□□□ 1.1
PKD1-230ENST00000565639 CSADQ9Y600 493 aa21.9■■□□□ 1.1
PKD1-230ENST00000565639 ABCB11O95342 1321 aa21.9■■□□□ 1.1
PKD1-230ENST00000565639 EDIL3O43854 480 aa21.9■■□□□ 1.1
PKD1-230ENST00000565639 ICAM1P05362 532 aa21.9■■□□□ 1.1
PKD1-230ENST00000565639 OR52Z1P0C646 297 aa21.9■■□□□ 1.1
PKD1-230ENST00000565639 GCFC2P16383 781 aaKnown RBP21.9■■□□□ 1.1
PKD1-230ENST00000565639 TYRO3Q06418 890 aa21.9■■□□□ 1.1
PKD1-230ENST00000565639 KRBA2Q6ZNG9 492 aa21.9■■□□□ 1.1
PKD1-230ENST00000565639 LDHDQ86WU2 507 aa21.9■■□□□ 1.1
PKD1-230ENST00000565639 RBM46Q8TBY0 533 aaKnown RBP21.9■■□□□ 1.1
PKD1-230ENST00000565639 SYMPKQ92797 1274 aaKnown RBP21.9■■□□□ 1.1
PKD1-230ENST00000565639 ANO3Q9BYT9 981 aa21.9■■□□□ 1.1
PKD1-230ENST00000565639 FLOT1O75955 427 aa21.89■■□□□ 1.09
PKD1-230ENST00000565639 USP11P51784 963 aa21.89■■□□□ 1.09
PKD1-230ENST00000565639 DGKZQ13574 1117 aa21.89■■□□□ 1.09
PKD1-230ENST00000565639 EAPPQ56P03 285 aaPredicted RBP21.89■■□□□ 1.09
PKD1-230ENST00000565639 USP49Q70CQ1 688 aa21.89■■□□□ 1.09
PKD1-230ENST00000565639 HMGCS2P54868 508 aa21.88■■□□□ 1.09
PKD1-230ENST00000565639 SH3D19Q5HYK7 790 aa21.88■■□□□ 1.09
PKD1-230ENST00000565639 EPSTI1Q96J88 318 aa21.88■■□□□ 1.09
PKD1-230ENST00000565639 PYM1Q9BRP8 204 aaKnown RBP21.88■■□□□ 1.09
PKD1-230ENST00000565639 SLC38A10Q9HBR0 1119 aa21.88■■□□□ 1.09
PKD1-230ENST00000565639 ZNF536O15090 1300 aa21.88■■□□□ 1.09
PKD1-230ENST00000565639 POLR2DO15514 142 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms