RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 HSP90B1P14625 803 aaKnown RBP7.52□□□□□ -1.21
UBFD1-204ENST00000565634 SMAD3P84022 425 aaKnown RBP7.52□□□□□ -1.21
UBFD1-204ENST00000565634 HDAC1Q13547 482 aaPredicted RBP7.52□□□□□ -1.21
UBFD1-204ENST00000565634 GJC2Q5T442 439 aaPredicted RBP7.52□□□□□ -1.21
UBFD1-204ENST00000565634 TDRD7Q8NHU6 1098 aaKnown RBP7.52□□□□□ -1.21
UBFD1-204ENST00000565634 TRIM43Q96BQ3 446 aaPredicted RBP7.52□□□□□ -1.21
UBFD1-204ENST00000565634 EAF2Q96CJ1 260 aaPredicted RBP7.52□□□□□ -1.21
UBFD1-204ENST00000565634 UCN2Q96RP3 112 aa7.52□□□□□ -1.21
UBFD1-204ENST00000565634 PPP1R12CQ9BZL4 782 aa7.52□□□□□ -1.21
UBFD1-204ENST00000565634 CCDC8Q9H0W5 538 aaPredicted RBP7.52□□□□□ -1.21
UBFD1-204ENST00000565634 OSBPL3Q9H4L5 887 aa7.52□□□□□ -1.21
UBFD1-204ENST00000565634 C11orf16Q9NQ32 467 aa7.52□□□□□ -1.21
UBFD1-204ENST00000565634 CNNM1Q9NRU3 951 aa7.52□□□□□ -1.21
UBFD1-204ENST00000565634 TLR7Q9NYK1 1049 aaKnown RBP7.52□□□□□ -1.21
UBFD1-204ENST00000565634 ZNFX1Q9P2E3 1918 aaKnown RBP7.51□□□□□ -1.21
UBFD1-204ENST00000565634 MYH13Q9UKX3 1938 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 CACNA1GO43497 2377 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 A0A0G2JLL6 359 aaPredicted RBP7.51□□□□□ -1.21
UBFD1-204ENST00000565634 CXCL11O14625 94 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 BRD1O95696 1058 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 FGFR2P21802 821 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 CNGA1P29973 690 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 FKBP1AP62942 108 aaKnown RBP7.51□□□□□ -1.21
UBFD1-204ENST00000565634 MAP3K10Q02779 954 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 KCNA1Q09470 495 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 NFIAQ12857 509 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 NR1H3Q13133 447 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 G3BP1Q13283 466 aaKnown RBP eCLIP7.51□□□□□ -1.21
UBFD1-204ENST00000565634 CLN3Q13286 438 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 TAF7LQ5H9L4 462 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 TMEM31Q5JXX7 168 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 ANKRD45Q5TZF3 282 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 TSHZ3Q63HK5 1081 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 DCAF15Q66K64 600 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 APOBEC3HQ6NTF7 200 aaKnown RBP7.51□□□□□ -1.21
UBFD1-204ENST00000565634 KANK3Q6NY19 840 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 PRRT2Q7Z6L0 340 aaPredicted RBP7.51□□□□□ -1.21
UBFD1-204ENST00000565634 RHPN1Q8TCX5 695 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 ANKS1AQ92625 1134 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 GTPBP3Q969Y2 492 aaKnown RBP7.51□□□□□ -1.21
UBFD1-204ENST00000565634 FERMT2Q96AC1 680 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 SCARF2Q96GP6 870 aaPredicted RBP7.51□□□□□ -1.21
UBFD1-204ENST00000565634 RNPC3Q96LT9 517 aaKnown RBP7.51□□□□□ -1.21
UBFD1-204ENST00000565634 GAS2L1Q99501 681 aaPredicted RBP7.51□□□□□ -1.21
UBFD1-204ENST00000565634 ZNF112Q9UJU3 913 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 USTQ9Y2C2 406 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 AFG3L2Q9Y4W6 797 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 BRWD1Q9NSI6 2320 aa7.51□□□□□ -1.21
UBFD1-204ENST00000565634 PALM3A6NDB9 673 aaPredicted RBP7.5□□□□□ -1.21
UBFD1-204ENST00000565634 IGSF3O75054 1194 aa7.5□□□□□ -1.21
UBFD1-204ENST00000565634 PTPRAP18433 802 aa7.5□□□□□ -1.21
UBFD1-204ENST00000565634 TRIM60Q495X7 471 aa7.5□□□□□ -1.21
UBFD1-204ENST00000565634 METTL24Q5JXM2 366 aa7.5□□□□□ -1.21
UBFD1-204ENST00000565634 MAP3K21Q5TCX8 1036 aa7.5□□□□□ -1.21
UBFD1-204ENST00000565634 RNF20Q5VTR2 975 aa7.5□□□□□ -1.21
UBFD1-204ENST00000565634 FASTKD5Q7L8L6 764 aaKnown RBP7.5□□□□□ -1.21
UBFD1-204ENST00000565634 SMC5Q8IY18 1101 aa7.5□□□□□ -1.21
UBFD1-204ENST00000565634 FAM84BQ96KN1 310 aaPredicted RBP7.5□□□□□ -1.21
UBFD1-204ENST00000565634 UIMC1Q96RL1 719 aa7.5□□□□□ -1.21
UBFD1-204ENST00000565634 DBNDD2Q9BQY9 259 aa7.5□□□□□ -1.21
UBFD1-204ENST00000565634 RWDD1Q9H446 243 aaPredicted RBP7.5□□□□□ -1.21
UBFD1-204ENST00000565634 PPP4R2Q9NY27 417 aa7.5□□□□□ -1.21
UBFD1-204ENST00000565634 TMOD2Q9NZR1 351 aa7.5□□□□□ -1.21
UBFD1-204ENST00000565634 DAGLAQ9Y4D2 1042 aa7.5□□□□□ -1.21
UBFD1-204ENST00000565634 PCDHB11Q9Y5F2 797 aa7.5□□□□□ -1.21
UBFD1-204ENST00000565634 IVNS1ABPQ9Y6Y0 642 aa7.5□□□□□ -1.21
UBFD1-204ENST00000565634 CACNA1AO00555 2505 aa7.5□□□□□ -1.21
UBFD1-204ENST00000565634 CNTNAP5Q8WYK1 1306 aa7.5□□□□□ -1.21
UBFD1-204ENST00000565634 MYH2Q9UKX2 1941 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 FAM196BA6NMK8 535 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 PHF20L1A8MW92 1017 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 SPATA31C2B4DYI2 1134 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 RFXAPO00287 272 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 CIAO1O76071 339 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 PDE8BO95263 885 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 NEFLP07196 543 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 CAPN2P17655 700 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 HIBADHP31937 336 aaKnown RBP7.49□□□□□ -1.21
UBFD1-204ENST00000565634 PDE4CQ08493 712 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 SLC39A5Q6ZMH5 540 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 CCDC129Q6ZRS4 1044 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 TEKT1Q969V4 418 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 ACDQ96AP0 544 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 TIFAQ96CG3 184 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 LNPKQ9C0E8 428 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 ALG2Q9H553 416 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 CD320Q9NPF0 282 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 FLRT1Q9NZU1 646 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 CEP126Q9P2H0 1117 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 ATAD5Q96QE3 1844 aa7.49□□□□□ -1.21
UBFD1-204ENST00000565634 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.48□□□□□ -1.21
UBFD1-204ENST00000565634 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.48□□□□□ -1.21
UBFD1-204ENST00000565634 SMIM22K7EJ46 135 aa7.48□□□□□ -1.21
UBFD1-204ENST00000565634 FRAT2O75474 233 aaPredicted RBP7.48□□□□□ -1.21
UBFD1-204ENST00000565634 CHGBP05060 677 aa7.48□□□□□ -1.21
UBFD1-204ENST00000565634 THBS1P07996 1170 aa7.48□□□□□ -1.21
UBFD1-204ENST00000565634 IL15P40933 162 aaPredicted RBP7.48□□□□□ -1.21
UBFD1-204ENST00000565634 PHKA1P46020 1223 aa7.48□□□□□ -1.21
UBFD1-204ENST00000565634 MCCD1P59942 119 aaPredicted RBP7.48□□□□□ -1.21
UBFD1-204ENST00000565634 NUCB1Q02818 461 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms