RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 GUCY1B3Q02153 619 aa14.85□□□□□ -0.03
SPG7-209ENST00000564047 PKP1Q13835 747 aa14.85□□□□□ -0.03
SPG7-209ENST00000564047 OTUD7BQ6GQQ9 843 aa14.85□□□□□ -0.03
SPG7-209ENST00000564047 GALNT17Q6IS24 598 aa14.85□□□□□ -0.03
SPG7-209ENST00000564047 SAMD1Q6SPF0 538 aaPredicted RBP14.85□□□□□ -0.03
SPG7-209ENST00000564047 SHISA4Q96DD7 197 aa14.85□□□□□ -0.03
SPG7-209ENST00000564047 PHF20Q9BVI0 1012 aa14.85□□□□□ -0.03
SPG7-209ENST00000564047 ZDHHC9Q9Y397 364 aa14.85□□□□□ -0.03
SPG7-209ENST00000564047 CTDP1Q9Y5B0 961 aaPredicted RBP14.85□□□□□ -0.03
SPG7-209ENST00000564047 PTPRFP10586 1907 aa14.85□□□□□ -0.03
SPG7-209ENST00000564047 PDHXO00330 501 aa14.84□□□□□ -0.03
SPG7-209ENST00000564047 ATP2A1O14983 1001 aa14.84□□□□□ -0.03
SPG7-209ENST00000564047 MMP1P03956 469 aa14.84□□□□□ -0.03
SPG7-209ENST00000564047 CALML3P27482 149 aa14.84□□□□□ -0.03
SPG7-209ENST00000564047 NLRP5P59047 1200 aa14.84□□□□□ -0.03
SPG7-209ENST00000564047 SAFBQ15424 915 aaKnown RBP eCLIP14.84□□□□□ -0.03
SPG7-209ENST00000564047 NOM1Q5C9Z4 860 aaKnown RBP14.84□□□□□ -0.03
SPG7-209ENST00000564047 TYW1BQ6NUM6 668 aa14.84□□□□□ -0.03
SPG7-209ENST00000564047 CCDC174Q6PII3 467 aa14.84□□□□□ -0.03
SPG7-209ENST00000564047 MB21D1Q8N884 522 aa14.84□□□□□ -0.03
SPG7-209ENST00000564047 REPS2Q8NFH8 660 aa14.84□□□□□ -0.03
SPG7-209ENST00000564047 COA7Q96BR5 231 aa14.84□□□□□ -0.03
SPG7-209ENST00000564047 P2RX7Q99572 595 aaKnown RBP14.84□□□□□ -0.03
SPG7-209ENST00000564047 ZMYND12Q9H0C1 365 aa14.84□□□□□ -0.03
SPG7-209ENST00000564047 ZCCHC17Q9NP64 241 aaKnown RBP14.84□□□□□ -0.03
SPG7-209ENST00000564047 KCNJ14Q9UNX9 436 aa14.84□□□□□ -0.03
SPG7-209ENST00000564047 PCDHA1Q9Y5I3 950 aa14.84□□□□□ -0.03
SPG7-209ENST00000564047 ZNF536O15090 1300 aa14.84□□□□□ -0.03
SPG7-209ENST00000564047 GPR25O00155 361 aa14.83□□□□□ -0.04
SPG7-209ENST00000564047 GNA11P29992 359 aa14.83□□□□□ -0.04
SPG7-209ENST00000564047 HERVK_113P62684 666 aa14.83□□□□□ -0.04
SPG7-209ENST00000564047 SREBF2Q12772 1141 aa14.83□□□□□ -0.04
SPG7-209ENST00000564047 TEX2Q8IWB9 1127 aa14.83□□□□□ -0.04
SPG7-209ENST00000564047 DAGLBQ8NCG7 672 aa14.83□□□□□ -0.04
SPG7-209ENST00000564047 GTF3C2Q8WUA4 911 aaPredicted RBP14.83□□□□□ -0.04
SPG7-209ENST00000564047 PTPN18Q99952 460 aa14.83□□□□□ -0.04
SPG7-209ENST00000564047 BRMS1Q9HCU9 246 aa14.83□□□□□ -0.04
SPG7-209ENST00000564047 C6orf50Q9HD87 102 aa14.83□□□□□ -0.04
SPG7-209ENST00000564047 ABCB11O95342 1321 aa14.83□□□□□ -0.04
SPG7-209ENST00000564047 SMCO2A6NFE2 343 aa14.82□□□□□ -0.04
SPG7-209ENST00000564047 F13A1P00488 732 aa14.82□□□□□ -0.04
SPG7-209ENST00000564047 KRT2P35908 639 aa14.82□□□□□ -0.04
SPG7-209ENST00000564047 NPY5RQ15761 445 aa14.82□□□□□ -0.04
SPG7-209ENST00000564047 USH1GQ495M9 461 aa14.82□□□□□ -0.04
SPG7-209ENST00000564047 DIS3L2Q8IYB7 885 aaKnown RBP14.82□□□□□ -0.04
SPG7-209ENST00000564047 CPXCR1Q8N123 301 aa14.82□□□□□ -0.04
SPG7-209ENST00000564047 FAM43AQ8N2R8 423 aa14.82□□□□□ -0.04
SPG7-209ENST00000564047 GLT8D2Q9H1C3 349 aa14.82□□□□□ -0.04
SPG7-209ENST00000564047 ZSCAN16Q9H4T2 348 aaPredicted RBP14.82□□□□□ -0.04
SPG7-209ENST00000564047 RAVER2Q9HCJ3 691 aaKnown RBP14.82□□□□□ -0.04
SPG7-209ENST00000564047 ZNF214Q9UL59 606 aaPredicted RBP14.82□□□□□ -0.04
SPG7-209ENST00000564047 CCPG1Q9ULG6 757 aa14.82□□□□□ -0.04
SPG7-209ENST00000564047 PCDHA4Q9UN74 947 aa14.82□□□□□ -0.04
SPG7-209ENST00000564047 MRPL11Q9Y3B7 192 aaKnown RBP14.82□□□□□ -0.04
SPG7-209ENST00000564047 A0A0C4DFX4 3053 aa14.81□□□□□ -0.04
SPG7-209ENST00000564047 CEP290O15078 2479 aa14.81□□□□□ -0.04
SPG7-209ENST00000564047 FKTNO75072 461 aa14.81□□□□□ -0.04
SPG7-209ENST00000564047 TM4SF4P48230 202 aa14.81□□□□□ -0.04
SPG7-209ENST00000564047 FXR1P51114 621 aaKnown RBP eCLIP14.81□□□□□ -0.04
SPG7-209ENST00000564047 MRPL12P52815 198 aaKnown RBP14.81□□□□□ -0.04
SPG7-209ENST00000564047 RESTQ13127 1097 aa14.81□□□□□ -0.04
SPG7-209ENST00000564047 TMEM132BQ14DG7 1078 aa14.81□□□□□ -0.04
SPG7-209ENST00000564047 TKFCQ3LXA3 575 aa14.81□□□□□ -0.04
SPG7-209ENST00000564047 MCTP1Q6DN14 999 aa14.81□□□□□ -0.04
SPG7-209ENST00000564047 POTEEQ6S8J3 1075 aa14.81□□□□□ -0.04
SPG7-209ENST00000564047 BLIDQ8IZY5 108 aa14.81□□□□□ -0.04
SPG7-209ENST00000564047 BICD2Q8TD16 824 aa14.81□□□□□ -0.04
SPG7-209ENST00000564047 AGBL1Q96MI9 1066 aa14.81□□□□□ -0.04
SPG7-209ENST00000564047 PARK7Q99497 189 aaKnown RBP14.81□□□□□ -0.04
SPG7-209ENST00000564047 TEX13BQ9BXU2 312 aa14.81□□□□□ -0.04
SPG7-209ENST00000564047 FOXP1Q9H334 677 aaPredicted RBP14.81□□□□□ -0.04
SPG7-209ENST00000564047 RIC8AQ9NPQ8 531 aa14.81□□□□□ -0.04
SPG7-209ENST00000564047 RLFQ13129 1914 aa14.81□□□□□ -0.04
SPG7-209ENST00000564047 BTBD18B2RXH4 712 aa14.8□□□□□ -0.04
SPG7-209ENST00000564047 CYP2C8P10632 490 aa14.8□□□□□ -0.04
SPG7-209ENST00000564047 U2AF2P26368 475 aaKnown RBP eCLIP14.8□□□□□ -0.04
SPG7-209ENST00000564047 STAT3P40763 770 aa14.8□□□□□ -0.04
SPG7-209ENST00000564047 GCLCP48506 637 aaPredicted RBP14.8□□□□□ -0.04
SPG7-209ENST00000564047 ADCY7P51828 1080 aa14.8□□□□□ -0.04
SPG7-209ENST00000564047 GNL2Q13823 731 aaKnown RBP14.8□□□□□ -0.04
SPG7-209ENST00000564047 FOXD4L5Q5VV16 416 aaPredicted RBP14.8□□□□□ -0.04
SPG7-209ENST00000564047 BRAPQ7Z569 592 aa14.8□□□□□ -0.04
SPG7-209ENST00000564047 IFNL1Q8IU54 200 aa14.8□□□□□ -0.04
SPG7-209ENST00000564047 SMCR8Q8TEV9 937 aaPredicted RBP14.8□□□□□ -0.04
SPG7-209ENST00000564047 FOXD4L4Q8WXT5 416 aaPredicted RBP14.8□□□□□ -0.04
SPG7-209ENST00000564047 CUL5Q93034 780 aa14.8□□□□□ -0.04
SPG7-209ENST00000564047 PSTPIP2Q9H939 334 aa14.8□□□□□ -0.04
SPG7-209ENST00000564047 BTBD7Q9P203 1132 aa14.8□□□□□ -0.04
SPG7-209ENST00000564047 RABGAP1Q9Y3P9 1069 aa14.8□□□□□ -0.04
SPG7-209ENST00000564047 PARP14Q460N5 1801 aa14.8□□□□□ -0.04
SPG7-209ENST00000564047 KIF28PB7ZC32 967 aa14.79□□□□□ -0.04
SPG7-209ENST00000564047 M0R2N6 131 aa14.79□□□□□ -0.04
SPG7-209ENST00000564047 IGF2BP3O00425 579 aaKnown RBP eCLIP14.79□□□□□ -0.04
SPG7-209ENST00000564047 CNMDO75829 334 aa14.79□□□□□ -0.04
SPG7-209ENST00000564047 ALAS1P13196 640 aa14.79□□□□□ -0.04
SPG7-209ENST00000564047 SNRNP48Q6IEG0 339 aaKnown RBP14.79□□□□□ -0.04
SPG7-209ENST00000564047 FERMT3Q86UX7 667 aa14.79□□□□□ -0.04
SPG7-209ENST00000564047 RIOX2Q8IUF8 465 aa14.79□□□□□ -0.04
SPG7-209ENST00000564047 SAMD3Q8N6K7 520 aa14.79□□□□□ -0.04
SPG7-209ENST00000564047 OXER1Q8TDS5 423 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms