RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 CRISPLD2Q9H0B8 497 aa14.09□□□□□ -0.15
USP8-212ENST00000560730 DHX16O60231 1041 aaKnown RBP14.08□□□□□ -0.15
USP8-212ENST00000560730 RXRAP19793 462 aa14.08□□□□□ -0.15
USP8-212ENST00000560730 LIFRP42702 1097 aa14.08□□□□□ -0.15
USP8-212ENST00000560730 KRT32Q14532 448 aa14.08□□□□□ -0.15
USP8-212ENST00000560730 USH1GQ495M9 461 aa14.08□□□□□ -0.15
USP8-212ENST00000560730 LHX8Q68G74 356 aa14.08□□□□□ -0.15
USP8-212ENST00000560730 NSMFQ6X4W1 530 aa14.08□□□□□ -0.15
USP8-212ENST00000560730 NFXL1Q6ZNB6 911 aa14.08□□□□□ -0.15
USP8-212ENST00000560730 DHX32Q7L7V1 743 aaKnown RBP14.08□□□□□ -0.15
USP8-212ENST00000560730 TMTC2Q8N394 836 aa14.08□□□□□ -0.15
USP8-212ENST00000560730 FAM133AQ8N9E0 248 aa14.08□□□□□ -0.15
USP8-212ENST00000560730 JAKMIP1Q96N16 626 aaKnown RBP14.08□□□□□ -0.15
USP8-212ENST00000560730 CYP39A1Q9NYL5 469 aa14.08□□□□□ -0.15
USP8-212ENST00000560730 DDX49Q9Y6V7 483 aaKnown RBP14.08□□□□□ -0.15
USP8-212ENST00000560730 ASTN1O14525 1302 aa14.08□□□□□ -0.16
USP8-212ENST00000560730 WDR19Q8NEZ3 1342 aa14.08□□□□□ -0.16
USP8-212ENST00000560730 SOWAHBA6NEL2 793 aa14.07□□□□□ -0.16
USP8-212ENST00000560730 CCDC69A6NI79 296 aa14.07□□□□□ -0.16
USP8-212ENST00000560730 POTEB2H3BUK9 544 aa14.07□□□□□ -0.16
USP8-212ENST00000560730 CYTH3O43739 400 aa14.07□□□□□ -0.16
USP8-212ENST00000560730 PPP1R11O60927 126 aaPredicted RBP14.07□□□□□ -0.16
USP8-212ENST00000560730 DDAH1O94760 285 aa14.07□□□□□ -0.16
USP8-212ENST00000560730 SNAI1O95863 264 aaPredicted RBP14.07□□□□□ -0.16
USP8-212ENST00000560730 CNGA1P29973 690 aa14.07□□□□□ -0.16
USP8-212ENST00000560730 MTMR8Q96EF0 704 aa14.07□□□□□ -0.16
USP8-212ENST00000560730 RIOX1Q9H6W3 641 aa14.07□□□□□ -0.16
USP8-212ENST00000560730 PFASO15067 1338 aa14.07□□□□□ -0.16
USP8-212ENST00000560730 CACNB1Q02641 598 aaPredicted RBP14.07□□□□□ -0.16
USP8-212ENST00000560730 BAATQ14032 418 aaPredicted RBP14.07□□□□□ -0.16
USP8-212ENST00000560730 MAMDC4Q6UXC1 1216 aa14.07□□□□□ -0.16
USP8-212ENST00000560730 UBE2Q1Q7Z7E8 422 aa14.07□□□□□ -0.16
USP8-212ENST00000560730 SGMS1Q86VZ5 419 aa14.07□□□□□ -0.16
USP8-212ENST00000560730 FBXO11Q86XK2 927 aa14.07□□□□□ -0.16
USP8-212ENST00000560730 CCDC144CPQ8IYA2 1237 aa14.07□□□□□ -0.16
USP8-212ENST00000560730 TBC1D5Q92609 795 aa14.07□□□□□ -0.16
USP8-212ENST00000560730 BRPF3Q9ULD4 1205 aa14.07□□□□□ -0.16
USP8-212ENST00000560730 TNRC18O15417 2968 aaPredicted RBP14.06□□□□□ -0.16
USP8-212ENST00000560730 EPB41L2O43491 1005 aaKnown RBP14.06□□□□□ -0.16
USP8-212ENST00000560730 PLEKHA8P1O95397 391 aa14.06□□□□□ -0.16
USP8-212ENST00000560730 MNX1P50219 401 aaPredicted RBP14.06□□□□□ -0.16
USP8-212ENST00000560730 ANO1Q5XXA6 986 aa14.06□□□□□ -0.16
USP8-212ENST00000560730 SLC30A10Q6XR72 485 aa14.06□□□□□ -0.16
USP8-212ENST00000560730 ZNF467Q7Z7K2 595 aaPredicted RBP14.06□□□□□ -0.16
USP8-212ENST00000560730 CMTR1Q8N1G2 835 aaKnown RBP14.06□□□□□ -0.16
USP8-212ENST00000560730 DIS3LQ8TF46 1054 aaKnown RBP14.06□□□□□ -0.16
USP8-212ENST00000560730 PIBF1Q8WXW3 757 aa14.06□□□□□ -0.16
USP8-212ENST00000560730 PIGSQ96S52 555 aa14.06□□□□□ -0.16
USP8-212ENST00000560730 MAP3K14Q99558 947 aa14.06□□□□□ -0.16
USP8-212ENST00000560730 RNF216Q9NWF9 866 aaPredicted RBP14.06□□□□□ -0.16
USP8-212ENST00000560730 DDX20Q9UHI6 824 aaKnown RBP14.06□□□□□ -0.16
USP8-212ENST00000560730 PNMA2Q9UL42 364 aa14.06□□□□□ -0.16
USP8-212ENST00000560730 OGDHLQ9ULD0 1010 aa14.06□□□□□ -0.16
USP8-212ENST00000560730 SLC12A7Q9Y666 1083 aa14.06□□□□□ -0.16
USP8-212ENST00000560730 SYNGAP1Q96PV0 1343 aa14.05□□□□□ -0.16
USP8-212ENST00000560730 PTPDC1A2A3K4 754 aa14.05□□□□□ -0.16
USP8-212ENST00000560730 ZBTB5O15062 677 aa14.05□□□□□ -0.16
USP8-212ENST00000560730 FARP2O94887 1054 aaPredicted RBP14.05□□□□□ -0.16
USP8-212ENST00000560730 SEC24BO95487 1268 aa14.05□□□□□ -0.16
USP8-212ENST00000560730 HMGB1P09429 215 aaKnown RBP14.05□□□□□ -0.16
USP8-212ENST00000560730 ZNF865P0CJ78 1059 aaPredicted RBP14.05□□□□□ -0.16
USP8-212ENST00000560730 APOA5Q6Q788 366 aa14.05□□□□□ -0.16
USP8-212ENST00000560730 BLOC1S2Q6QNY1 142 aa14.05□□□□□ -0.16
USP8-212ENST00000560730 ARMCX2Q7L311 632 aa14.05□□□□□ -0.16
USP8-212ENST00000560730 HOMER1Q86YM7 354 aa14.05□□□□□ -0.16
USP8-212ENST00000560730 SRBD1Q8N5C6 995 aaKnown RBP14.05□□□□□ -0.16
USP8-212ENST00000560730 MSL3Q8N5Y2 521 aaKnown RBP14.05□□□□□ -0.16
USP8-212ENST00000560730 CTCFLQ8NI51 663 aaPredicted RBP14.05□□□□□ -0.16
USP8-212ENST00000560730 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.05□□□□□ -0.16
USP8-212ENST00000560730 ABCB11O95342 1321 aa14.04□□□□□ -0.16
USP8-212ENST00000560730 MKI67P46013 3256 aaKnown RBP14.04□□□□□ -0.16
USP8-212ENST00000560730 OPLAHO14841 1288 aa14.04□□□□□ -0.16
USP8-212ENST00000560730 SEPT4O43236 478 aa14.04□□□□□ -0.16
USP8-212ENST00000560730 CASTP20810 708 aaKnown RBP14.04□□□□□ -0.16
USP8-212ENST00000560730 RPS6KB1P23443 525 aa14.04□□□□□ -0.16
USP8-212ENST00000560730 CALML3P27482 149 aa14.04□□□□□ -0.16
USP8-212ENST00000560730 KIF5BP33176 963 aa14.04□□□□□ -0.16
USP8-212ENST00000560730 RPS6P62753 249 aaKnown RBP14.04□□□□□ -0.16
USP8-212ENST00000560730 RNF207Q6ZRF8 634 aa14.04□□□□□ -0.16
USP8-212ENST00000560730 Q6ZUG5 572 aa14.04□□□□□ -0.16
USP8-212ENST00000560730 MICU3Q86XE3 530 aa14.04□□□□□ -0.16
USP8-212ENST00000560730 FANCBQ8NB91 859 aa14.04□□□□□ -0.16
USP8-212ENST00000560730 PAWRQ96IZ0 340 aaKnown RBP14.04□□□□□ -0.16
USP8-212ENST00000560730 AMNQ9BXJ7 453 aa14.04□□□□□ -0.16
USP8-212ENST00000560730 ALPK3Q96L96 1907 aa14.03□□□□□ -0.16
USP8-212ENST00000560730 PNMA6FA0A0J9YX94 578 aa14.03□□□□□ -0.16
USP8-212ENST00000560730 CALM1P0DP23 149 aa14.03□□□□□ -0.16
USP8-212ENST00000560730 CALM2P0DP24 149 aa14.03□□□□□ -0.16
USP8-212ENST00000560730 CALM3P0DP25 149 aa14.03□□□□□ -0.16
USP8-212ENST00000560730 APOBRQ0VD83 1088 aa14.03□□□□□ -0.16
USP8-212ENST00000560730 RGS22Q8NE09 1264 aa14.03□□□□□ -0.16
USP8-212ENST00000560730 LENG1Q96BZ8 264 aaPredicted RBP14.03□□□□□ -0.16
USP8-212ENST00000560730 SPZ1Q9BXG8 430 aa14.03□□□□□ -0.16
USP8-212ENST00000560730 KATNBL1Q9H079 304 aa14.03□□□□□ -0.16
USP8-212ENST00000560730 NRBP1Q9UHY1 535 aa14.03□□□□□ -0.16
USP8-212ENST00000560730 CNPY2Q9Y2B0 182 aa14.03□□□□□ -0.16
USP8-212ENST00000560730 PCDHA1Q9Y5I3 950 aa14.03□□□□□ -0.16
USP8-212ENST00000560730 LRRC37A2A6NM11 1700 aa14.03□□□□□ -0.16
USP8-212ENST00000560730 KLF18A0A0U1RQI7 1052 aa14.02□□□□□ -0.16
USP8-212ENST00000560730 hCG_1642624A0A1W2PR95 340 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms