RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 GUCY1B3Q02153 619 aa19.03■□□□□ 0.64
TPM1-219ENST00000559397 PFKFB3Q16875 520 aaPredicted RBP19.03■□□□□ 0.64
TPM1-219ENST00000559397 CSPP1Q1MSJ5 1256 aa19.03■□□□□ 0.64
TPM1-219ENST00000559397 GPT2Q8TD30 523 aa19.03■□□□□ 0.64
TPM1-219ENST00000559397 SMCR8Q8TEV9 937 aaPredicted RBP19.03■□□□□ 0.64
TPM1-219ENST00000559397 WASF1Q92558 559 aa19.03■□□□□ 0.64
TPM1-219ENST00000559397 AIFM3Q96NN9 605 aa19.03■□□□□ 0.64
TPM1-219ENST00000559397 SEC63Q9UGP8 760 aaKnown RBP19.03■□□□□ 0.64
TPM1-219ENST00000559397 CA12O43570 354 aa19.02■□□□□ 0.64
TPM1-219ENST00000559397 ICAM1P05362 532 aa19.02■□□□□ 0.64
TPM1-219ENST00000559397 GCLCP48506 637 aaPredicted RBP19.02■□□□□ 0.64
TPM1-219ENST00000559397 RAVER2Q9HCJ3 691 aaKnown RBP19.02■□□□□ 0.64
TPM1-219ENST00000559397 RABGAP1Q9Y3P9 1069 aa19.02■□□□□ 0.64
TPM1-219ENST00000559397 MBD3O95983 291 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 SCG2P13521 617 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 TAL1P17542 331 aaPredicted RBP19.01■□□□□ 0.63
TPM1-219ENST00000559397 CRHR2Q13324 411 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 GSE1Q14687 1217 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 CPXCR1Q8N123 301 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 AGBL1Q96MI9 1066 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 ZFYVE28Q9HCC9 887 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 GJB4Q9NTQ9 266 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 ELP1O95163 1332 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 FIBPO43427 364 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 TLR2O60603 784 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 NCLP19338 710 aaKnown RBP19.01■□□□□ 0.63
TPM1-219ENST00000559397 Q3C1V9 767 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 WWC2Q6AWC2 1192 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 ATL3Q6DD88 541 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 FBXO11Q86XK2 927 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 PAGR1Q9BTK6 254 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 AMNQ9BXJ7 453 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 CFHR5Q9BXR6 569 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 SCAND2PQ9GZW5 306 aaPredicted RBP19.01■□□□□ 0.63
TPM1-219ENST00000559397 MORF4L1Q9UBU8 362 aa19.01■□□□□ 0.63
TPM1-219ENST00000559397 CTDP1Q9Y5B0 961 aaPredicted RBP19.01■□□□□ 0.63
TPM1-219ENST00000559397 MYH15Q9Y2K3 1946 aa19■□□□□ 0.63
TPM1-219ENST00000559397 GADD45BO75293 160 aaPredicted RBP19■□□□□ 0.63
TPM1-219ENST00000559397 BCRP11274 1271 aa19■□□□□ 0.63
TPM1-219ENST00000559397 ERVK-9P63128 1117 aa19■□□□□ 0.63
TPM1-219ENST00000559397 ERVK-24P63145 666 aa19■□□□□ 0.63
TPM1-219ENST00000559397 KRT40Q6A162 431 aa19■□□□□ 0.63
TPM1-219ENST00000559397 C17orf99Q6UX52 265 aa19■□□□□ 0.63
TPM1-219ENST00000559397 ANKRD13CQ8N6S4 541 aa19■□□□□ 0.63
TPM1-219ENST00000559397 GPKOWQ92917 476 aaPredicted RBP eCLIP19■□□□□ 0.63
TPM1-219ENST00000559397 COA7Q96BR5 231 aa19■□□□□ 0.63
TPM1-219ENST00000559397 SHISA4Q96DD7 197 aa19■□□□□ 0.63
TPM1-219ENST00000559397 TEX13BQ9BXU2 312 aa19■□□□□ 0.63
TPM1-219ENST00000559397 SPATC1LQ9H0A9 340 aa19■□□□□ 0.63
TPM1-219ENST00000559397 R3HDMLQ9H3Y0 253 aa19■□□□□ 0.63
TPM1-219ENST00000559397 RNF186Q9NXI6 227 aa19■□□□□ 0.63
TPM1-219ENST00000559397 STAT3P40763 770 aa18.99■□□□□ 0.63
TPM1-219ENST00000559397 TYW1BQ6NUM6 668 aa18.99■□□□□ 0.63
TPM1-219ENST00000559397 BARHL2Q9NY43 387 aa18.99■□□□□ 0.63
TPM1-219ENST00000559397 CPA4Q9UI42 421 aa18.99■□□□□ 0.63
TPM1-219ENST00000559397 CCPG1Q9ULG6 757 aa18.99■□□□□ 0.63
TPM1-219ENST00000559397 RIPK3Q9Y572 518 aa18.99■□□□□ 0.63
TPM1-219ENST00000559397 STXBP3O00186 592 aa18.98■□□□□ 0.63
TPM1-219ENST00000559397 UBE2HP62256 183 aa18.98■□□□□ 0.63
TPM1-219ENST00000559397 PLS1Q14651 629 aa18.98■□□□□ 0.63
TPM1-219ENST00000559397 USH1GQ495M9 461 aa18.98■□□□□ 0.63
TPM1-219ENST00000559397 SNRNP48Q6IEG0 339 aaKnown RBP18.98■□□□□ 0.63
TPM1-219ENST00000559397 HEATR3Q7Z4Q2 680 aa18.98■□□□□ 0.63
TPM1-219ENST00000559397 BRAPQ7Z569 592 aa18.98■□□□□ 0.63
TPM1-219ENST00000559397 RIOX2Q8IUF8 465 aa18.98■□□□□ 0.63
TPM1-219ENST00000559397 GPRC5AQ8NFJ5 357 aa18.98■□□□□ 0.63
TPM1-219ENST00000559397 PNMA2Q9UL42 364 aa18.98■□□□□ 0.63
TPM1-219ENST00000559397 PCDHA1Q9Y5I3 950 aa18.98■□□□□ 0.63
TPM1-219ENST00000559397 hCG_1984214I3L0E3 225 aa18.98■□□□□ 0.63
TPM1-219ENST00000559397 FAM110CQ1W6H9 321 aa18.98■□□□□ 0.63
TPM1-219ENST00000559397 ZNF713Q8N859 430 aaPredicted RBP18.98■□□□□ 0.63
TPM1-219ENST00000559397 LEO1Q8WVC0 666 aaPredicted RBP18.98■□□□□ 0.63
TPM1-219ENST00000559397 MOV10L1Q9BXT6 1211 aaKnown RBP18.98■□□□□ 0.63
TPM1-219ENST00000559397 TFIP11Q9UBB9 837 aaKnown RBP18.98■□□□□ 0.63
TPM1-219ENST00000559397 CFAP45Q9UL16 551 aa18.98■□□□□ 0.63
TPM1-219ENST00000559397 ABCB11O95342 1321 aa18.97■□□□□ 0.63
TPM1-219ENST00000559397 TRPA1O75762 1119 aa18.97■□□□□ 0.63
TPM1-219ENST00000559397 TBC1D8O95759 1140 aa18.97■□□□□ 0.63
TPM1-219ENST00000559397 TRIM29Q14134 588 aa18.97■□□□□ 0.63
TPM1-219ENST00000559397 ZNF396Q96N95 335 aaPredicted RBP18.97■□□□□ 0.63
TPM1-219ENST00000559397 GZF1Q9H116 711 aaPredicted RBP18.97■□□□□ 0.63
TPM1-219ENST00000559397 VPS54Q9P1Q0 977 aa18.97■□□□□ 0.63
TPM1-219ENST00000559397 KIF28PB7ZC32 967 aa18.96■□□□□ 0.63
TPM1-219ENST00000559397 ALAS1P13196 640 aa18.96■□□□□ 0.63
TPM1-219ENST00000559397 U2AF2P26368 475 aaKnown RBP eCLIP18.96■□□□□ 0.634e-8■■■■■ 35.5
TPM1-219ENST00000559397 MAP2K1Q02750 393 aaPredicted RBP18.96■□□□□ 0.63
TPM1-219ENST00000559397 TRAF1Q13077 416 aa18.96■□□□□ 0.63
TPM1-219ENST00000559397 TKFCQ3LXA3 575 aa18.96■□□□□ 0.63
TPM1-219ENST00000559397 CLEC4DQ8WXI8 215 aa18.96■□□□□ 0.63
TPM1-219ENST00000559397 SH3GLB2Q9NR46 395 aa18.96■□□□□ 0.63
TPM1-219ENST00000559397 SAGE1Q9NXZ1 904 aa18.96■□□□□ 0.63
TPM1-219ENST00000559397 RCOR1Q9UKL0 485 aa18.96■□□□□ 0.63
TPM1-219ENST00000559397 OPLAHO14841 1288 aa18.95■□□□□ 0.62
TPM1-219ENST00000559397 NAPAP54920 295 aa18.95■□□□□ 0.62
TPM1-219ENST00000559397 PPP1R18Q6NYC8 613 aa18.95■□□□□ 0.62
TPM1-219ENST00000559397 TRERF1Q96PN7 1200 aa18.95■□□□□ 0.62
TPM1-219ENST00000559397 MRPL11Q9Y3B7 192 aaKnown RBP18.95■□□□□ 0.62
TPM1-219ENST00000559397 SLC25A27O95847 323 aa18.95■□□□□ 0.62
TPM1-219ENST00000559397 MMP1P03956 469 aa18.95■□□□□ 0.62
TPM1-219ENST00000559397 MUM1L1Q5H9M0 696 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms