RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 USP14P54578 494 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 DYNLL1P63167 89 aaKnown RBP7.85□□□□□ -1.15
USP3-210ENST00000559192 FOXO4P98177 505 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 TFAP4Q01664 338 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 GRIN1Q05586 938 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 RAB3IL1Q8TBN0 382 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 FUT8Q9BYC5 575 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 HOMER2Q9NSB8 354 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 FBXO2Q9UK22 296 aaPredicted RBP7.85□□□□□ -1.15
USP3-210ENST00000559192 DENND2AQ9ULE3 1009 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 MROH1Q8NDA8 1641 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 SETD1BQ9UPS6 1966 aaKnown RBP7.85□□□□□ -1.15
USP3-210ENST00000559192 PALLDQ8WX93 1383 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 FAM205CA6NFA0 338 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 UBE2Q2LH0YL09 131 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 PCCAP05165 728 aaPredicted RBP7.85□□□□□ -1.15
USP3-210ENST00000559192 PPP2R5BQ15173 497 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 TMEM132AQ24JP5 1023 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 NAA35Q5VZE5 725 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 ATG9AQ7Z3C6 839 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 CCDC65Q8IXS2 484 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 VCXQ9H320 206 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 POLD4Q9HCU8 107 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 TUBE1Q9UJT0 475 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 ITSN1Q15811 1721 aa7.85□□□□□ -1.15
USP3-210ENST00000559192 TSPOAP1O95153 1857 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 H7C1W4 665 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 EEF1GP26641 437 aaKnown RBP7.84□□□□□ -1.15
USP3-210ENST00000559192 ANTXR2P58335 489 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 GSTO1P78417 241 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 ATP11AP98196 1134 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 LRRC41Q15345 812 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 KSR1Q8IVT5 923 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 CUL5Q93034 780 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 MRRFQ96E11 262 aaKnown RBP7.84□□□□□ -1.15
USP3-210ENST00000559192 RNF26Q9BY78 433 aaPredicted RBP7.84□□□□□ -1.15
USP3-210ENST00000559192 MTRF1LQ9UGC7 380 aaKnown RBP7.84□□□□□ -1.15
USP3-210ENST00000559192 PDE8BO95263 885 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 CCDC172P0C7W6 258 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 FXR1P51114 621 aaKnown RBP eCLIP7.84□□□□□ -1.15
USP3-210ENST00000559192 FBXW10Q5XX13 1052 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 NFRKBQ6P4R8 1299 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 ZNF365Q70YC5 407 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 SYNE4Q8N205 404 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 NOA1Q8NC60 698 aaKnown RBP7.84□□□□□ -1.15
USP3-210ENST00000559192 P2RX5Q93086 422 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 NEURL4Q96JN8 1562 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 A0A1B0GTH6 734 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 PRCPP42785 496 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 NR1I3Q14994 352 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 APBB1IPQ7Z5R6 666 aaPredicted RBP7.84□□□□□ -1.15
USP3-210ENST00000559192 CCDC84Q86UT8 332 aaPredicted RBP7.84□□□□□ -1.15
USP3-210ENST00000559192 NBPF5PQ86XG9 351 aaPredicted RBP7.84□□□□□ -1.15
USP3-210ENST00000559192 ERMNQ8TAM6 284 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 CHP1Q99653 195 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 RABGAP1Q9Y3P9 1069 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 ESYT3A0FGR9 886 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 SMCO2A6NFE2 343 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 NR1D1P20393 614 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 MTMR3Q13615 1198 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 GRIPAP1Q4V328 841 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 SH2D4BQ5SQS7 431 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 ILDR1Q86SU0 546 aaPredicted RBP7.84□□□□□ -1.15
USP3-210ENST00000559192 SPATS2Q86XZ4 545 aaKnown RBP7.84□□□□□ -1.15
USP3-210ENST00000559192 CCDC24Q8N4L8 307 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 MORC4Q8TE76 937 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 HPS5Q9UPZ3 1129 aa7.84□□□□□ -1.15
USP3-210ENST00000559192 TTC26A0AVF1 554 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 KIF11P52732 1056 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 ZBTB16Q05516 673 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 CETN1Q12798 172 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 ZBTB17Q13105 803 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 TSNAXIP1Q2TAA8 658 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 GSTA5Q7RTV2 222 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 ANKRD42Q8N9B4 389 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 U2AF1L4Q8WU68 220 aaKnown RBP7.83□□□□□ -1.16
USP3-210ENST00000559192 THAP9Q9H5L6 903 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 LCMT1Q9UIC8 334 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 HPCAL4Q9UM19 191 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 PFDN1O60925 122 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 LDHBP07195 334 aaKnown RBP7.83□□□□□ -1.16
USP3-210ENST00000559192 CLTAP09496 248 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 ABCB4P21439 1286 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 VWA3BQ502W6 1294 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 CCDC38Q502W7 563 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 HERC4Q5GLZ8 1057 aaPredicted RBP7.83□□□□□ -1.16
USP3-210ENST00000559192 MUM1L1Q5H9M0 696 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 SEL1L2Q5TEA6 688 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 KRT25Q7Z3Z0 450 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 STMN2Q93045 179 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 AXIN2Q9Y2T1 843 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 DDAH1O94760 285 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 FAM13AO94988 1023 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 LDHCP07864 332 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 EPB41P11171 864 aaKnown RBP7.83□□□□□ -1.16
USP3-210ENST00000559192 DENND2CQ68D51 928 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 USP49Q70CQ1 688 aa7.83□□□□□ -1.16
USP3-210ENST00000559192 N4BP2L2Q92802 583 aaPredicted RBP7.83□□□□□ -1.16
USP3-210ENST00000559192 DDX27Q96GQ7 796 aaKnown RBP7.83□□□□□ -1.16
USP3-210ENST00000559192 ADAMTS2O95450 1211 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms