RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 A0A1W2PQY0 241 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 FAM83GA6ND36 823 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 K7ESF4 209 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 HRKO00198 91 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 AQP7O14520 342 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 CBX7O95931 251 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 TPP2P29144 1249 aaPredicted RBP2.52□□□□□ -2.01
HIF1A-212ENST00000557538 MECP2P51608 486 aaKnown RBP2.52□□□□□ -2.01
HIF1A-212ENST00000557538 LACTBP83111 547 aaPredicted RBP2.52□□□□□ -2.01
HIF1A-212ENST00000557538 PABPC4Q13310 644 aaKnown RBP eCLIP2.52□□□□□ -2.018e-8■□□□□ 10.9
HIF1A-212ENST00000557538 SNX17Q15036 470 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 DENND5AQ6IQ26 1287 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 OTOP1Q7RTM1 612 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 THNSL2Q86YJ6 484 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 AHI1Q8N157 1196 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 ANKS4BQ8N8V4 417 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 TMEM52Q8NDY8 209 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 GSG1L2A8MUP6 293 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 FADS2P1A8MWK0 482 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 NRDCO43847 1150 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 TP53P04637 393 aaPredicted RBP2.52□□□□□ -2.01
HIF1A-212ENST00000557538 POU3F3P20264 500 aaPredicted RBP2.52□□□□□ -2.01
HIF1A-212ENST00000557538 PMLP29590 882 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 GYS2P54840 703 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 TDRD10Q5VZ19 366 aaKnown RBP2.52□□□□□ -2.01
HIF1A-212ENST00000557538 CWF19L1Q69YN2 538 aaKnown RBP2.52□□□□□ -2.01
HIF1A-212ENST00000557538 CBLL1Q75N03 491 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 LILRA2Q8N149 483 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 MTA3Q9BTC8 594 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 SLKQ9H2G2 1235 aaPredicted RBP2.52□□□□□ -2.01
HIF1A-212ENST00000557538 CRTAC1Q9NQ79 661 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 FBXL21Q9UKT6 434 aa2.52□□□□□ -2.01
HIF1A-212ENST00000557538 H0Y8X5 98 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 TBX1O43435 398 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 HPXP02790 462 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 GDNFP39905 211 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 CHRNEQ04844 493 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 SNW1Q13573 536 aaKnown RBP2.51□□□□□ -2.01
HIF1A-212ENST00000557538 EMC4Q5J8M3 183 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 FAM209AQ5JX71 171 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 PRSS36Q5K4E3 855 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 IFNL3Q8IZI9 196 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 TMEM145Q8NBT3 493 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 FLAD1Q8NFF5 587 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 PANK1Q8TE04 598 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 XAGE3Q8WTP9 111 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 ZNF512BQ96KM6 892 aaPredicted RBP2.51□□□□□ -2.01
HIF1A-212ENST00000557538 FGD4Q96M96 766 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 SPC25Q9HBM1 224 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.51□□□□□ -2.01
HIF1A-212ENST00000557538 C2orf71A6NGG8 1288 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 FAM155AB1AL88 458 aaPredicted RBP2.51□□□□□ -2.01
HIF1A-212ENST00000557538 PPP1R12AO14974 1030 aaPredicted RBP2.51□□□□□ -2.01
HIF1A-212ENST00000557538 DNAJC6O75061 913 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 DNAJC8O75937 253 aaPredicted RBP2.51□□□□□ -2.01
HIF1A-212ENST00000557538 LTBRP36941 435 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 DUSP4Q13115 394 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 CBX2Q14781 532 aaPredicted RBP2.51□□□□□ -2.01
HIF1A-212ENST00000557538 RNF187Q5TA31 235 aaPredicted RBP2.51□□□□□ -2.01
HIF1A-212ENST00000557538 HLA-DQA1Q5Y7H0 255 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 SLC23A3Q6PIS1 610 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 LBX2Q6XYB7 198 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 RNF180Q86T96 592 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 SPPL2CQ8IUH8 684 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 BTN2A2Q8WVV5 523 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 MAP6Q96JE9 813 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 CLUHP3Q96NS8 147 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 WTIPA6NIX2 430 aaPredicted RBP2.51□□□□□ -2.01
HIF1A-212ENST00000557538 SRGAP3O43295 1099 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 BPIP17213 487 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 STAT3P40763 770 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 GRIA2P42262 883 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 SLC6A11P48066 632 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 TKFCQ3LXA3 575 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 NOL9Q5SY16 702 aaKnown RBP2.51□□□□□ -2.01
HIF1A-212ENST00000557538 PLD6Q8N2A8 252 aaKnown RBP2.51□□□□□ -2.01
HIF1A-212ENST00000557538 PPM1KQ8N3J5 372 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 UBE2FQ969M7 185 aa2.51□□□□□ -2.01
HIF1A-212ENST00000557538 IPO9Q96P70 1041 aaKnown RBP2.51□□□□□ -2.01
HIF1A-212ENST00000557538 NOTOA8MTQ0 251 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 MEFVO15553 781 aaPredicted RBP2.5□□□□□ -2.01
HIF1A-212ENST00000557538 ADAM23O75077 832 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 ASMTLO95671 621 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 EYA4O95677 639 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 TBC1D8O95759 1140 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 CKMP06732 381 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 THBDP07204 575 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 PAMP19021 973 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 EPHA5P54756 1037 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 LAPTM5Q13571 262 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 GPR158Q5T848 1215 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 PDZD8Q8NEN9 1154 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 SCYL1Q96KG9 808 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 IER2Q9BTL4 223 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 DSCC1Q9BVC3 393 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 NOL6Q9H6R4 1146 aaKnown RBP2.5□□□□□ -2.01
HIF1A-212ENST00000557538 CAAP1Q9H8G2 361 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 ERVK13-1Q9NX77 482 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 DUSP13Q9UII6 198 aa2.5□□□□□ -2.01
HIF1A-212ENST00000557538 NOP58Q9Y2X3 529 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms