RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 CNGA1P29973 690 aa18.5■□□□□ 0.55
TUBB3-214ENST00000557490 MAGEA10P43363 369 aaPredicted RBP18.5■□□□□ 0.55
TUBB3-214ENST00000557490 KRT32Q14532 448 aa18.5■□□□□ 0.55
TUBB3-214ENST00000557490 TMTC2Q8N394 836 aa18.5■□□□□ 0.55
TUBB3-214ENST00000557490 DIS3LQ8TF46 1054 aaKnown RBP18.5■□□□□ 0.55
TUBB3-214ENST00000557490 GUCD1Q96NT3 240 aa18.5■□□□□ 0.55
TUBB3-214ENST00000557490 NEK1Q96PY6 1258 aa18.5■□□□□ 0.55
TUBB3-214ENST00000557490 CRISPLD2Q9H0B8 497 aa18.5■□□□□ 0.55
TUBB3-214ENST00000557490 CPVLQ9H3G5 476 aa18.5■□□□□ 0.55
TUBB3-214ENST00000557490 SENP2Q9HC62 589 aa18.5■□□□□ 0.55
TUBB3-214ENST00000557490 PFASO15067 1338 aa18.49■□□□□ 0.55
TUBB3-214ENST00000557490 WDR19Q8NEZ3 1342 aa18.49■□□□□ 0.55
TUBB3-214ENST00000557490 POTEB2H3BUK9 544 aa18.49■□□□□ 0.55
TUBB3-214ENST00000557490 GRM4Q14833 912 aa18.49■□□□□ 0.55
TUBB3-214ENST00000557490 TSGA10IPQ3SY00 556 aa18.49■□□□□ 0.55
TUBB3-214ENST00000557490 NFXL1Q6ZNB6 911 aa18.49■□□□□ 0.55
TUBB3-214ENST00000557490 ADGRF4Q8IZF3 695 aa18.49■□□□□ 0.55
TUBB3-214ENST00000557490 MSL3Q8N5Y2 521 aaKnown RBP18.49■□□□□ 0.55
TUBB3-214ENST00000557490 TINF2Q9BSI4 451 aa18.49■□□□□ 0.55
TUBB3-214ENST00000557490 LY9Q9HBG7 655 aa18.49■□□□□ 0.55
TUBB3-214ENST00000557490 PALM3A6NDB9 673 aaPredicted RBP18.48■□□□□ 0.55
TUBB3-214ENST00000557490 KLRF2D3W0D1 207 aa18.48■□□□□ 0.55
TUBB3-214ENST00000557490 SH2B2O14492 632 aaPredicted RBP18.48■□□□□ 0.55
TUBB3-214ENST00000557490 CYBAP13498 195 aa18.48■□□□□ 0.55
TUBB3-214ENST00000557490 SYN1P17600 705 aa18.48■□□□□ 0.55
TUBB3-214ENST00000557490 CDC37Q16543 378 aaPredicted RBP18.48■□□□□ 0.55
TUBB3-214ENST00000557490 MUM1L1Q5H9M0 696 aa18.48■□□□□ 0.55
TUBB3-214ENST00000557490 NECAB2Q7Z6G3 386 aa18.48■□□□□ 0.55
TUBB3-214ENST00000557490 ZNF467Q7Z7K2 595 aaPredicted RBP18.48■□□□□ 0.55
TUBB3-214ENST00000557490 RASEFQ8IZ41 740 aa18.48■□□□□ 0.55
TUBB3-214ENST00000557490 STAG2Q8N3U4 1231 aa18.48■□□□□ 0.55
TUBB3-214ENST00000557490 VAT1LQ9HCJ6 419 aa18.48■□□□□ 0.55
TUBB3-214ENST00000557490 A1CFQ9NQ94 594 aaKnown RBP18.48■□□□□ 0.55
TUBB3-214ENST00000557490 NRBP1Q9UHY1 535 aa18.48■□□□□ 0.55
TUBB3-214ENST00000557490 MAD2L2Q9UI95 211 aa18.48■□□□□ 0.55
TUBB3-214ENST00000557490 CCDC69A6NI79 296 aa18.47■□□□□ 0.55
TUBB3-214ENST00000557490 MSCO60682 206 aa18.47■□□□□ 0.55
TUBB3-214ENST00000557490 DDAH1O94760 285 aa18.47■□□□□ 0.55
TUBB3-214ENST00000557490 TAL1P17542 331 aaPredicted RBP18.47■□□□□ 0.55
TUBB3-214ENST00000557490 TROAPQ12815 778 aa18.47■□□□□ 0.55
TUBB3-214ENST00000557490 NSMFQ6X4W1 530 aa18.47■□□□□ 0.55
TUBB3-214ENST00000557490 ZNF654Q8IZM8 581 aa18.47■□□□□ 0.55
TUBB3-214ENST00000557490 TRPV1Q8NER1 839 aa18.47■□□□□ 0.55
TUBB3-214ENST00000557490 NUP133Q8WUM0 1156 aa18.47■□□□□ 0.55
TUBB3-214ENST00000557490 JMJD4Q9H9V9 463 aa18.47■□□□□ 0.55
TUBB3-214ENST00000557490 GPHNQ9NQX3 736 aaPredicted RBP18.47■□□□□ 0.55
TUBB3-214ENST00000557490 DDX20Q9UHI6 824 aaKnown RBP18.47■□□□□ 0.55
TUBB3-214ENST00000557490 EPB41L2O43491 1005 aaKnown RBP18.46■□□□□ 0.55
TUBB3-214ENST00000557490 HMGB1P09429 215 aaKnown RBP18.46■□□□□ 0.55
TUBB3-214ENST00000557490 HSPA4P34932 840 aa18.46■□□□□ 0.55
TUBB3-214ENST00000557490 LIFRP42702 1097 aa18.46■□□□□ 0.55
TUBB3-214ENST00000557490 USH1GQ495M9 461 aa18.46■□□□□ 0.55
TUBB3-214ENST00000557490 PRAMEF19Q5SWL8 479 aa18.46■□□□□ 0.55
TUBB3-214ENST00000557490 DHX32Q7L7V1 743 aaKnown RBP18.46■□□□□ 0.55
TUBB3-214ENST00000557490 ANKLE1Q8NAG6 615 aa18.46■□□□□ 0.55
TUBB3-214ENST00000557490 CTCFLQ8NI51 663 aaPredicted RBP18.46■□□□□ 0.55
TUBB3-214ENST00000557490 UBE2OQ9C0C9 1292 aaKnown RBP18.46■□□□□ 0.55
TUBB3-214ENST00000557490 OGDHLQ9ULD0 1010 aa18.46■□□□□ 0.55
TUBB3-214ENST00000557490 CNPY2Q9Y2B0 182 aa18.46■□□□□ 0.55
TUBB3-214ENST00000557490 SYNGAP1Q96PV0 1343 aa18.46■□□□□ 0.55
TUBB3-214ENST00000557490 COL9A1P20849 921 aa18.45■□□□□ 0.54
TUBB3-214ENST00000557490 KIF5BP33176 963 aa18.45■□□□□ 0.54
TUBB3-214ENST00000557490 QRICH1Q2TAL8 776 aa18.45■□□□□ 0.54
TUBB3-214ENST00000557490 LHX8Q68G74 356 aa18.45■□□□□ 0.54
TUBB3-214ENST00000557490 MAMDC4Q6UXC1 1216 aa18.45■□□□□ 0.54
TUBB3-214ENST00000557490 FBXO11Q86XK2 927 aa18.45■□□□□ 0.54
TUBB3-214ENST00000557490 FAM133AQ8N9E0 248 aa18.45■□□□□ 0.54
TUBB3-214ENST00000557490 KCNB2Q92953 911 aa18.45■□□□□ 0.54
TUBB3-214ENST00000557490 MAP3K14Q99558 947 aa18.45■□□□□ 0.54
TUBB3-214ENST00000557490 LRRC2Q9BYS8 371 aa18.45■□□□□ 0.54
TUBB3-214ENST00000557490 CYP39A1Q9NYL5 469 aa18.45■□□□□ 0.54
TUBB3-214ENST00000557490 ABCB11O95342 1321 aa18.45■□□□□ 0.54
TUBB3-214ENST00000557490 PTPDC1A2A3K4 754 aa18.44■□□□□ 0.54
TUBB3-214ENST00000557490 NFIBO00712 420 aa18.44■□□□□ 0.54
TUBB3-214ENST00000557490 SEPT4O43236 478 aa18.44■□□□□ 0.54
TUBB3-214ENST00000557490 CALM1P0DP23 149 aa18.44■□□□□ 0.54
TUBB3-214ENST00000557490 CALM2P0DP24 149 aa18.44■□□□□ 0.54
TUBB3-214ENST00000557490 CALM3P0DP25 149 aa18.44■□□□□ 0.54
TUBB3-214ENST00000557490 CNTN2Q02246 1040 aa18.44■□□□□ 0.54
TUBB3-214ENST00000557490 BAATQ14032 418 aaPredicted RBP18.44■□□□□ 0.54
TUBB3-214ENST00000557490 COL9A3Q14050 684 aaPredicted RBP18.44■□□□□ 0.54
TUBB3-214ENST00000557490 ADCK5Q3MIX3 580 aa18.44■□□□□ 0.54
TUBB3-214ENST00000557490 SYNE3Q6ZMZ3 975 aa18.44■□□□□ 0.54
TUBB3-214ENST00000557490 CLEC4DQ8WXI8 215 aa18.44■□□□□ 0.54
TUBB3-214ENST00000557490 MYL10Q9BUA6 226 aa18.44■□□□□ 0.54
TUBB3-214ENST00000557490 SNX14Q9Y5W7 946 aa18.44■□□□□ 0.54
TUBB3-214ENST00000557490 SLC12A7Q9Y666 1083 aa18.44■□□□□ 0.54
TUBB3-214ENST00000557490 ASB14A6NK59 587 aa18.43■□□□□ 0.54
TUBB3-214ENST00000557490 GNAQP50148 359 aa18.43■□□□□ 0.54
TUBB3-214ENST00000557490 EXOSC10Q01780 885 aaKnown RBP18.43■□□□□ 0.54
TUBB3-214ENST00000557490 FAM109BQ6ICB4 259 aaPredicted RBP18.43■□□□□ 0.54
TUBB3-214ENST00000557490 RNF207Q6ZRF8 634 aa18.43■□□□□ 0.54
TUBB3-214ENST00000557490 FGD4Q96M96 766 aa18.43■□□□□ 0.54
TUBB3-214ENST00000557490 JAKMIP1Q96N16 626 aaKnown RBP18.43■□□□□ 0.54
TUBB3-214ENST00000557490 LZTS2Q9BRK4 669 aa18.43■□□□□ 0.54
TUBB3-214ENST00000557490 AMNQ9BXJ7 453 aa18.43■□□□□ 0.54
TUBB3-214ENST00000557490 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.43■□□□□ 0.54
TUBB3-214ENST00000557490 ADD3Q9UEY8 706 aaKnown RBP18.43■□□□□ 0.54
TUBB3-214ENST00000557490 MRPL11Q9Y3B7 192 aaKnown RBP18.43■□□□□ 0.54
TUBB3-214ENST00000557490 ZNFX1Q9P2E3 1918 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms