RNA–Protein interactions for RNA: ENST00000556513.5

HNRNPC-225, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-225ENST00000556513 MTA3Q9BTC8 594 aa12.08□□□□□ -0.48
HNRNPC-225ENST00000556513 HTATIP2Q9BUP3 242 aa12.08□□□□□ -0.48
HNRNPC-225ENST00000556513 UBA5Q9GZZ9 404 aa12.08□□□□□ -0.48
HNRNPC-225ENST00000556513 CPVLQ9H3G5 476 aa12.08□□□□□ -0.48
HNRNPC-225ENST00000556513 ACAD9Q9H845 621 aa12.08□□□□□ -0.48
HNRNPC-225ENST00000556513 FBXO40Q9UH90 709 aa12.08□□□□□ -0.48
HNRNPC-225ENST00000556513 DDX20Q9UHI6 824 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-225ENST00000556513 CCPG1Q9ULG6 757 aa12.08□□□□□ -0.48
HNRNPC-225ENST00000556513 RBM8AQ9Y5S9 174 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-225ENST00000556513 E7EWF7 191 aa12.07□□□□□ -0.48
HNRNPC-225ENST00000556513 PSMA5P28066 241 aa12.07□□□□□ -0.48
HNRNPC-225ENST00000556513 CNTN2Q02246 1040 aa12.07□□□□□ -0.48
HNRNPC-225ENST00000556513 KRT32Q14532 448 aa12.07□□□□□ -0.48
HNRNPC-225ENST00000556513 NECTIN1Q15223 517 aa12.07□□□□□ -0.48
HNRNPC-225ENST00000556513 MUM1L1Q5H9M0 696 aa12.07□□□□□ -0.48
HNRNPC-225ENST00000556513 BTNL9Q6UXG8 535 aa12.07□□□□□ -0.48
HNRNPC-225ENST00000556513 STOX1Q6ZVD7 989 aa12.07□□□□□ -0.48
HNRNPC-225ENST00000556513 CHST3Q7LGC8 479 aa12.07□□□□□ -0.48
HNRNPC-225ENST00000556513 ZSCAN31Q96LW9 406 aaPredicted RBP12.07□□□□□ -0.48
HNRNPC-225ENST00000556513 SLKQ9H2G2 1235 aaPredicted RBP12.07□□□□□ -0.48
HNRNPC-225ENST00000556513 RANBP17Q9H2T7 1088 aaKnown RBP12.07□□□□□ -0.48
HNRNPC-225ENST00000556513 C11orf49Q9H6J7 331 aa12.07□□□□□ -0.48
HNRNPC-225ENST00000556513 DIS3Q9Y2L1 958 aaKnown RBP12.07□□□□□ -0.48
HNRNPC-225ENST00000556513 LRRC37A2A6NM11 1700 aa12.06□□□□□ -0.48
HNRNPC-225ENST00000556513 DNAJC25-GNG10A0A024R161 153 aa12.06□□□□□ -0.48
HNRNPC-225ENST00000556513 H0YGN5 161 aa12.06□□□□□ -0.48
HNRNPC-225ENST00000556513 MSCO60682 206 aa12.06□□□□□ -0.48
HNRNPC-225ENST00000556513 ICAM1P05362 532 aa12.06□□□□□ -0.48
HNRNPC-225ENST00000556513 CAPN2P17655 700 aa12.06□□□□□ -0.48
HNRNPC-225ENST00000556513 NEK4P51957 841 aa12.06□□□□□ -0.48
HNRNPC-225ENST00000556513 IFIT1BQ5T764 474 aaKnown RBP12.06□□□□□ -0.48
HNRNPC-225ENST00000556513 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.06□□□□□ -0.48
HNRNPC-225ENST00000556513 RALYLQ86SE5 291 aaKnown RBP12.06□□□□□ -0.48
HNRNPC-225ENST00000556513 NCOA7Q8NI08 942 aa12.06□□□□□ -0.48
HNRNPC-225ENST00000556513 A1CFQ9NQ94 594 aaKnown RBP12.06□□□□□ -0.48
HNRNPC-225ENST00000556513 TRIOBPQ9H2D6 2365 aa12.06□□□□□ -0.48
HNRNPC-225ENST00000556513 PFASO15067 1338 aa12.05□□□□□ -0.48
HNRNPC-225ENST00000556513 POTEB2H3BUK9 544 aa12.05□□□□□ -0.48
HNRNPC-225ENST00000556513 SEPT4O43236 478 aa12.05□□□□□ -0.48
HNRNPC-225ENST00000556513 EVI5O60447 810 aa12.05□□□□□ -0.48
HNRNPC-225ENST00000556513 ANKRD1Q15327 319 aa12.05□□□□□ -0.48
HNRNPC-225ENST00000556513 SEC23AQ15436 765 aa12.05□□□□□ -0.48
HNRNPC-225ENST00000556513 TKFCQ3LXA3 575 aa12.05□□□□□ -0.48
HNRNPC-225ENST00000556513 GPATCH4Q5T3I0 446 aaKnown RBP12.05□□□□□ -0.48
HNRNPC-225ENST00000556513 GJC2Q5T442 439 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-225ENST00000556513 NSMFQ6X4W1 530 aa12.05□□□□□ -0.48
HNRNPC-225ENST00000556513 FGD4Q96M96 766 aa12.05□□□□□ -0.48
HNRNPC-225ENST00000556513 CNPY2Q9Y2B0 182 aa12.05□□□□□ -0.48
HNRNPC-225ENST00000556513 IFIT3O14879 490 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-225ENST00000556513 DHX16O60231 1041 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-225ENST00000556513 SNAI1O95863 264 aaPredicted RBP12.04□□□□□ -0.48
HNRNPC-225ENST00000556513 USH1GQ495M9 461 aa12.04□□□□□ -0.48
HNRNPC-225ENST00000556513 MB21D2Q8IYB1 491 aaPredicted RBP12.04□□□□□ -0.48
HNRNPC-225ENST00000556513 LENG1Q96BZ8 264 aaPredicted RBP12.04□□□□□ -0.48
HNRNPC-225ENST00000556513 PURBQ96QR8 312 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-225ENST00000556513 SENP2Q9HC62 589 aa12.04□□□□□ -0.48
HNRNPC-225ENST00000556513 VAT1LQ9HCJ6 419 aa12.04□□□□□ -0.48
HNRNPC-225ENST00000556513 SH2B1Q9NRF2 756 aaPredicted RBP12.04□□□□□ -0.48
HNRNPC-225ENST00000556513 CYP39A1Q9NYL5 469 aa12.04□□□□□ -0.48
HNRNPC-225ENST00000556513 ZHX1Q9UKY1 873 aaPredicted RBP12.04□□□□□ -0.48
HNRNPC-225ENST00000556513 PNMA2Q9UL42 364 aa12.04□□□□□ -0.48
HNRNPC-225ENST00000556513 DDX49Q9Y6V7 483 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-225ENST00000556513 SYNGAP1Q96PV0 1343 aa12.04□□□□□ -0.48
HNRNPC-225ENST00000556513 ERICH2A1L162 156 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 SOWAHBA6NEL2 793 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 NFIBO00712 420 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 SLC27A2O14975 620 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 PARP1P09874 1014 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 ZNF865P0CJ78 1059 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 WTAPQ15007 396 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 SART3Q15020 963 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 ASPRV1Q53RT3 343 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 CREB3L3Q68CJ9 461 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 CCDC144CPQ8IYA2 1237 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 C7orf61Q8IZ16 206 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 ADGRF4Q8IZF3 695 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 STAG2Q8N3U4 1231 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 FAM133AQ8N9E0 248 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 SENP6Q9GZR1 1112 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 LAMA2P24043 3122 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 ASTN1O14525 1302 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 PTPDC1A2A3K4 754 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 HMGB1P09429 215 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 RARBP10826 455 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 COL6A1P12109 1028 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 ANTXR2P58335 489 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 BAATQ14032 418 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 COL9A3Q14050 684 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 CDC37Q16543 378 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 TMEM67Q5HYA8 995 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 MAMDC4Q6UXC1 1216 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 ARMCX2Q7L311 632 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 ZNF467Q7Z7K2 595 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 MSL3Q8N5Y2 521 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 ZSWIM6Q9HCJ5 1215 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 XPNPEP3Q9NQH7 507 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 PCDH10Q9P2E7 1040 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 NRBP1Q9UHY1 535 aa12.03□□□□□ -0.48
HNRNPC-225ENST00000556513 NR2E3Q9Y5X4 410 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms