RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 SCRN1Q12765 414 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 IKZF1Q13422 519 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 DPY19L1Q2PZI1 675 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 PLEKHG4Q58EX7 1191 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 SLC35F1Q5T1Q4 408 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 YOD1Q5VVQ6 348 aaPredicted RBP4.96□□□□□ -1.62
SRP54-209ENST00000555746 NSMFQ6X4W1 530 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 HOMER1Q86YM7 354 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 KREMEN2Q8NCW0 462 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 KCTD13Q8WZ19 329 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 APPBP2Q92624 585 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 IER2Q9BTL4 223 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 DHRS4Q9BTZ2 278 aa4.96□□□□□ -1.62
SRP54-209ENST00000555746 PAK6Q9NQU5 681 aaPredicted RBP4.96□□□□□ -1.62
SRP54-209ENST00000555746 DNAJC25-GNG10A0A024R161 153 aa4.95□□□□□ -1.62
SRP54-209ENST00000555746 TRBV23-1A0A0A0MS06 115 aa4.95□□□□□ -1.62
SRP54-209ENST00000555746 C2orf71A6NGG8 1288 aa4.95□□□□□ -1.62
SRP54-209ENST00000555746 STXBP3O00186 592 aa4.95□□□□□ -1.62
SRP54-209ENST00000555746 PRODHO43272 600 aa4.95□□□□□ -1.62
SRP54-209ENST00000555746 SNRPB2P08579 225 aaKnown RBP4.95□□□□□ -1.62
SRP54-209ENST00000555746 FUT4P22083 530 aa4.95□□□□□ -1.62
SRP54-209ENST00000555746 CD96P40200 585 aa4.95□□□□□ -1.62
SRP54-209ENST00000555746 SUMO1P63165 101 aaKnown RBP4.95□□□□□ -1.62
SRP54-209ENST00000555746 LRP8Q14114 963 aa4.95□□□□□ -1.62
SRP54-209ENST00000555746 SF1Q15637 639 aaKnown RBP4.95□□□□□ -1.62
SRP54-209ENST00000555746 FAM209AQ5JX71 171 aa4.95□□□□□ -1.62
SRP54-209ENST00000555746 ACBD5Q5T8D3 534 aaPredicted RBP4.95□□□□□ -1.62
SRP54-209ENST00000555746 EGFLAMQ63HQ2 1017 aa4.95□□□□□ -1.62
SRP54-209ENST00000555746 EEF1DP3Q658K8 133 aa4.95□□□□□ -1.62
SRP54-209ENST00000555746 ZNF574Q6ZN55 896 aaPredicted RBP4.95□□□□□ -1.62
SRP54-209ENST00000555746 NPLOC4Q8TAT6 608 aa4.95□□□□□ -1.62
SRP54-209ENST00000555746 FCRL2Q96LA5 508 aaPredicted RBP4.95□□□□□ -1.62
SRP54-209ENST00000555746 CDC6Q99741 560 aa4.95□□□□□ -1.62
SRP54-209ENST00000555746 CARS2Q9HA77 564 aaKnown RBP4.95□□□□□ -1.62
SRP54-209ENST00000555746 AP5S1Q9NUS5 200 aa4.95□□□□□ -1.62
SRP54-209ENST00000555746 FANCLQ9NW38 375 aa4.95□□□□□ -1.62
SRP54-209ENST00000555746 MRPS23Q9Y3D9 190 aaKnown RBP4.95□□□□□ -1.62
SRP54-209ENST00000555746 CDC45O75419 566 aa4.94□□□□□ -1.62
SRP54-209ENST00000555746 THBDP07204 575 aa4.94□□□□□ -1.62
SRP54-209ENST00000555746 GSTM1P09488 218 aa4.94□□□□□ -1.62
SRP54-209ENST00000555746 CANXP27824 592 aaKnown RBP4.94□□□□□ -1.62
SRP54-209ENST00000555746 CEBPAP49715 358 aaPredicted RBP4.94□□□□□ -1.62
SRP54-209ENST00000555746 ZP2Q05996 745 aa4.94□□□□□ -1.62
SRP54-209ENST00000555746 ZMYM1Q5SVZ6 1142 aa4.94□□□□□ -1.62
SRP54-209ENST00000555746 E4F1Q66K89 784 aaPredicted RBP4.94□□□□□ -1.62
SRP54-209ENST00000555746 SLC23A3Q6PIS1 610 aa4.94□□□□□ -1.62
SRP54-209ENST00000555746 C16orf86Q6ZW13 317 aa4.94□□□□□ -1.62
SRP54-209ENST00000555746 KIAA0907Q7Z7F0 614 aaPredicted RBP4.94□□□□□ -1.62
SRP54-209ENST00000555746 TMEM145Q8NBT3 493 aa4.94□□□□□ -1.62
SRP54-209ENST00000555746 FLCNQ8NFG4 579 aa4.94□□□□□ -1.62
SRP54-209ENST00000555746 FRS2Q8WU20 508 aa4.94□□□□□ -1.62
SRP54-209ENST00000555746 LINC01599Q8WXQ3 324 aa4.94□□□□□ -1.62
SRP54-209ENST00000555746 IPO9Q96P70 1041 aaKnown RBP4.94□□□□□ -1.62
SRP54-209ENST00000555746 ALPK1Q96QP1 1244 aa4.94□□□□□ -1.62
SRP54-209ENST00000555746 G6PC3Q9BUM1 346 aa4.94□□□□□ -1.62
SRP54-209ENST00000555746 ERVK13-1Q9NX77 482 aa4.94□□□□□ -1.62
SRP54-209ENST00000555746 NPFFR2Q9Y5X5 522 aa4.94□□□□□ -1.62
SRP54-209ENST00000555746 TRBV23OR9-2A0A075B6M9 112 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 FKTNO75072 461 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 ADAMTS4O75173 837 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 WNT11O96014 354 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 C6orf222P0C671 652 aaPredicted RBP4.93□□□□□ -1.62
SRP54-209ENST00000555746 ZGLP1P0C6A0 271 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 RPL10P27635 214 aaKnown RBP4.93□□□□□ -1.62
SRP54-209ENST00000555746 L1CAMP32004 1257 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 ECI1P42126 302 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 SEPHS1P49903 392 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 TCEA2Q15560 299 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 NTRK3Q16288 839 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 TRIM61Q5EBN2 209 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 DENND5AQ6IQ26 1287 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 CYP2R1Q6VVX0 501 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 ZPBP2Q6X784 338 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 WAPLQ7Z5K2 1190 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 KSR1Q8IVT5 923 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 AGBL5Q8NDL9 886 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 TMEM52Q8NDY8 209 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 PTCHD1Q96NR3 888 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 MMP19Q99542 508 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 CDADC1Q9BWV3 514 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 MRPL4Q9BYD3 311 aaKnown RBP4.93□□□□□ -1.62
SRP54-209ENST00000555746 NCOA5Q9HCD5 579 aaKnown RBP4.93□□□□□ -1.62
SRP54-209ENST00000555746 PCMTD2Q9NV79 361 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 TNFRSF10DQ9UBN6 386 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 ANGEL1Q9UNK9 670 aaKnown RBP4.93□□□□□ -1.62
SRP54-209ENST00000555746 CEP164Q9UPV0 1460 aa4.93□□□□□ -1.62
SRP54-209ENST00000555746 ZNF608Q9ULD9 1512 aaPredicted RBP4.92□□□□□ -1.62
SRP54-209ENST00000555746 FADS2P1A8MWK0 482 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 ARNTLO00327 626 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 PLD2O14939 933 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 KCNQ2O43526 872 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 HYAL3O43820 417 aaPredicted RBP4.92□□□□□ -1.62
SRP54-209ENST00000555746 RFPL3O75679 317 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 PAMP19021 973 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 KIR2DL1P43626 348 aaPredicted RBP4.92□□□□□ -1.62
SRP54-209ENST00000555746 KIR2DL2P43627 348 aaPredicted RBP4.92□□□□□ -1.62
SRP54-209ENST00000555746 KCNJ6P48051 423 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 DUSP4Q13115 394 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 PRSS53Q2L4Q9 553 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 FNDC3BQ53EP0 1204 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms