RNA–Protein interactions for RNA: ENST00000553942.5

MARK3-207, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-207ENST00000553942 USP17L20D6RJB6 530 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 PRPF40AO75400 957 aaKnown RBP10.47□□□□□ -0.73
MARK3-207ENST00000553942 MBD3O95983 291 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 HOXA13P31271 388 aaPredicted RBP10.47□□□□□ -0.73
MARK3-207ENST00000553942 HOXD11P31277 338 aaPredicted RBP10.47□□□□□ -0.73
MARK3-207ENST00000553942 NF2P35240 595 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 STAT2P52630 851 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 NLRP5P59047 1200 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 USP17L24Q0WX57 530 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 PFKFB3Q16875 520 aaPredicted RBP10.47□□□□□ -0.73
MARK3-207ENST00000553942 ASPRV1Q53RT3 343 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 CCDC178Q5BJE1 867 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 USP17L6PQ6QN14 398 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 GMCL1P1Q8NEA9 526 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 ATG4CQ96DT6 458 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 P2RX7Q99572 595 aaKnown RBP10.47□□□□□ -0.73
MARK3-207ENST00000553942 RIOX1Q9H6W3 641 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 GOPCQ9HD26 462 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 BIN2Q9UBW5 565 aaPredicted RBP10.47□□□□□ -0.73
MARK3-207ENST00000553942 PPP2R3BQ9Y5P8 575 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 STXBP3O00186 592 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 MMP1P03956 469 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 NAPAP54920 295 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 GNL2Q13823 731 aaKnown RBP10.47□□□□□ -0.73
MARK3-207ENST00000553942 JAKMIP3Q5VZ66 844 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 ANKRD13AQ8IZ07 590 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 RRP36Q96EU6 259 aaKnown RBP10.47□□□□□ -0.73
MARK3-207ENST00000553942 GBA2Q9HCG7 927 aaPredicted RBP10.47□□□□□ -0.73
MARK3-207ENST00000553942 RAVER2Q9HCJ3 691 aaKnown RBP10.47□□□□□ -0.73
MARK3-207ENST00000553942 CLIC4Q9Y696 253 aa10.47□□□□□ -0.73
MARK3-207ENST00000553942 HUNKP57058 714 aa10.46□□□□□ -0.73
MARK3-207ENST00000553942 UBXN2AP68543 259 aa10.46□□□□□ -0.73
MARK3-207ENST00000553942 SYDE2Q5VT97 1194 aa10.46□□□□□ -0.73
MARK3-207ENST00000553942 CHADLQ6NUI6 762 aa10.46□□□□□ -0.73
MARK3-207ENST00000553942 GJA10Q969M2 543 aa10.46□□□□□ -0.73
MARK3-207ENST00000553942 SLC10A4Q96EP9 437 aa10.46□□□□□ -0.73
MARK3-207ENST00000553942 USP28Q96RU2 1077 aa10.46□□□□□ -0.73
MARK3-207ENST00000553942 KIAA1683Q9H0B3 1180 aa10.46□□□□□ -0.73
MARK3-207ENST00000553942 RIPK3Q9Y572 518 aa10.46□□□□□ -0.73
MARK3-207ENST00000553942 DOCK1Q14185 1865 aa10.46□□□□□ -0.73
MARK3-207ENST00000553942 SMCO2A6NFE2 343 aa10.46□□□□□ -0.74
MARK3-207ENST00000553942 TPM3P06753 285 aa10.46□□□□□ -0.74
MARK3-207ENST00000553942 CYP2C8P10632 490 aa10.46□□□□□ -0.74
MARK3-207ENST00000553942 YY1P25490 414 aa10.46□□□□□ -0.74
MARK3-207ENST00000553942 TRIM29Q14134 588 aa10.46□□□□□ -0.74
MARK3-207ENST00000553942 PIK3AP1Q6ZUJ8 805 aa10.46□□□□□ -0.74
MARK3-207ENST00000553942 DCAF4Q8WV16 495 aa10.46□□□□□ -0.74
MARK3-207ENST00000553942 GMCL1Q96IK5 515 aa10.46□□□□□ -0.74
MARK3-207ENST00000553942 PHF20Q9BVI0 1012 aa10.46□□□□□ -0.74
MARK3-207ENST00000553942 SPZ1Q9BXG8 430 aa10.46□□□□□ -0.74
MARK3-207ENST00000553942 SEC63Q9UGP8 760 aaKnown RBP10.46□□□□□ -0.74
MARK3-207ENST00000553942 PCDHA1Q9Y5I3 950 aa10.46□□□□□ -0.74
MARK3-207ENST00000553942 PHIPQ8WWQ0 1821 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 PSEN1P49768 467 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 TOB1P50616 345 aaPredicted RBP10.45□□□□□ -0.74
MARK3-207ENST00000553942 PLS1Q14651 629 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 GPATCH4Q5T3I0 446 aaKnown RBP10.45□□□□□ -0.74
MARK3-207ENST00000553942 SLC30A10Q6XR72 485 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 ARMC9Q7Z3E5 817 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 ZNF784Q8NCA9 323 aaPredicted RBP10.45□□□□□ -0.74
MARK3-207ENST00000553942 TSPY26PQ9H489 355 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 BARHL2Q9NY43 387 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 RIOK3O14730 519 aaKnown RBP10.45□□□□□ -0.74
MARK3-207ENST00000553942 OPLAHO14841 1288 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 ZBTB5O15062 677 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 PDCP20941 246 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 MARCKSP29966 332 aaPredicted RBP10.45□□□□□ -0.74
MARK3-207ENST00000553942 RCAN1P53805 252 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 SPECC1Q5M775 1068 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 LDLRAD1Q5T700 205 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 KRT222Q8N1A0 295 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 GPT2Q8TD30 523 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 PCDHB6Q9Y5E3 794 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 STK36Q9NRP7 1315 aa10.45□□□□□ -0.74
MARK3-207ENST00000553942 NFIBO00712 420 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 GNAQP50148 359 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 GRIN1Q05586 938 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 INF2Q27J81 1249 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 MUM1L1Q5H9M0 696 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 MAP3K14Q99558 947 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 PAGR1Q9BTK6 254 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 ZNF536O15090 1300 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 PNMA6FA0A0J9YX94 578 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 ALAS1P13196 640 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 NCBP1Q09161 790 aaKnown RBP10.44□□□□□ -0.74
MARK3-207ENST00000553942 MOGSQ13724 837 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 NOL9Q5SY16 702 aaKnown RBP10.44□□□□□ -0.74
MARK3-207ENST00000553942 FCHSD1Q86WN1 690 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 ERO1BQ86YB8 467 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 HOOK2Q96ED9 719 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 WDR18Q9BV38 432 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 AS3MTQ9HBK9 375 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 TMEM63CQ9P1W3 806 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 FEZ2Q9UHY8 353 aaPredicted RBP10.44□□□□□ -0.74
MARK3-207ENST00000553942 PCDHA6Q9UN73 950 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 PCDHA8Q9Y5H6 950 aa10.44□□□□□ -0.74
MARK3-207ENST00000553942 SYCE3A1L190 88 aa10.43□□□□□ -0.74
MARK3-207ENST00000553942 SPDYE5A6NIY4 337 aa10.43□□□□□ -0.74
MARK3-207ENST00000553942 RBAK-RBAKDNI3L0D1 243 aa10.43□□□□□ -0.74
MARK3-207ENST00000553942 CFBP00751 764 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms