RNA–Protein interactions for RNA: ENST00000553932.5

LINC00639-201, long intergenic non-protein coding RNA 639, humanhuman

TSL 2 BASIC

Gene LINC00639, Length 4,496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-201ENST00000553932 TUBGCP2Q9BSJ2 902 aa16.36■□□□□ 0.21
LINC00639-201ENST00000553932 CSRNP2Q9H175 543 aa16.36■□□□□ 0.21
LINC00639-201ENST00000553932 CNOT10Q9H9A5 744 aaKnown RBP16.36■□□□□ 0.21
LINC00639-201ENST00000553932 CLTCQ00610 1675 aaKnown RBP16.36■□□□□ 0.21
LINC00639-201ENST00000553932 PTCH1Q13635 1447 aa16.36■□□□□ 0.21
LINC00639-201ENST00000553932 NRXN1Q9ULB1 1477 aa16.36■□□□□ 0.21
LINC00639-201ENST00000553932 IGHMBP2P38935 993 aaKnown RBP16.36■□□□□ 0.21
LINC00639-201ENST00000553932 KRT79Q5XKE5 535 aa16.36■□□□□ 0.21
LINC00639-201ENST00000553932 NGLY1Q96IV0 654 aa16.36■□□□□ 0.21
LINC00639-201ENST00000553932 TLR7Q9NYK1 1049 aaKnown RBP16.36■□□□□ 0.21
LINC00639-201ENST00000553932 IQSEC3Q9UPP2 1182 aaPredicted RBP16.36■□□□□ 0.21
LINC00639-201ENST00000553932 RASSF10A6NK89 507 aa16.35■□□□□ 0.21
LINC00639-201ENST00000553932 ZRANB2O95218 330 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC00639-201ENST00000553932 NBPF10Q6P3W6 841 aaKnown RBP16.35■□□□□ 0.21
LINC00639-201ENST00000553932 SV2BQ7L1I2 683 aa16.35■□□□□ 0.21
LINC00639-201ENST00000553932 APPBP2Q92624 585 aa16.35■□□□□ 0.21
LINC00639-201ENST00000553932 PPP1R9AQ9ULJ8 1098 aa16.35■□□□□ 0.21
LINC00639-201ENST00000553932 LRRC7Q96NW7 1537 aa16.35■□□□□ 0.21
LINC00639-201ENST00000553932 AIFM3Q96NN9 605 aa16.35■□□□□ 0.21
LINC00639-201ENST00000553932 NHEJ1Q9H9Q4 299 aaPredicted RBP16.35■□□□□ 0.21
LINC00639-201ENST00000553932 CTDP1Q9Y5B0 961 aaPredicted RBP16.35■□□□□ 0.21
LINC00639-201ENST00000553932 ATP1A1P05023 1023 aaKnown RBP16.35■□□□□ 0.21
LINC00639-201ENST00000553932 LSP1P33241 339 aa16.35■□□□□ 0.21
LINC00639-201ENST00000553932 FBXO41Q8TF61 875 aa16.35■□□□□ 0.21
LINC00639-201ENST00000553932 DDX23Q9BUQ8 820 aaKnown RBP16.35■□□□□ 0.21
LINC00639-201ENST00000553932 SLAIN2Q9P270 581 aa16.35■□□□□ 0.21
LINC00639-201ENST00000553932 NOL3O60936 208 aaKnown RBP16.35■□□□□ 0.21
LINC00639-201ENST00000553932 KRT31Q15323 416 aa16.35■□□□□ 0.21
LINC00639-201ENST00000553932 SYCP3Q8IZU3 236 aa16.35■□□□□ 0.21
LINC00639-201ENST00000553932 SYMPKQ92797 1274 aaKnown RBP16.35■□□□□ 0.21
LINC00639-201ENST00000553932 ABHD10Q9NUJ1 306 aa16.35■□□□□ 0.21
LINC00639-201ENST00000553932 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC00639-201ENST00000553932 MMEP08473 750 aa16.34■□□□□ 0.21
LINC00639-201ENST00000553932 GBP7Q8N8V2 638 aaPredicted RBP16.34■□□□□ 0.21
LINC00639-201ENST00000553932 LRRIQ3A6PVS8 624 aaPredicted RBP16.34■□□□□ 0.21
LINC00639-201ENST00000553932 MAGOHP61326 146 aaKnown RBP16.34■□□□□ 0.21
LINC00639-201ENST00000553932 MIGA1Q8NAN2 632 aa16.34■□□□□ 0.21
LINC00639-201ENST00000553932 NSMCE1Q8WV22 266 aa16.34■□□□□ 0.21
LINC00639-201ENST00000553932 MAGOHBQ96A72 148 aaKnown RBP16.34■□□□□ 0.21
LINC00639-201ENST00000553932 SGSM3Q96HU1 749 aa16.34■□□□□ 0.21
LINC00639-201ENST00000553932 ATP6V1G3Q96LB4 118 aa16.34■□□□□ 0.21
LINC00639-201ENST00000553932 BABAM1Q9NWV8 329 aa16.34■□□□□ 0.21
LINC00639-201ENST00000553932 CPS1P31327 1500 aa16.34■□□□□ 0.21
LINC00639-201ENST00000553932 TBCAO75347 108 aaKnown RBP16.34■□□□□ 0.21
LINC00639-201ENST00000553932 KRT14P02533 472 aa16.34■□□□□ 0.21
LINC00639-201ENST00000553932 SEPT2Q15019 361 aa16.34■□□□□ 0.21
LINC00639-201ENST00000553932 NUGGCQ68CJ6 796 aa16.34■□□□□ 0.21
LINC00639-201ENST00000553932 DYMQ7RTS9 669 aa16.34■□□□□ 0.21
LINC00639-201ENST00000553932 ZC3H18Q86VM9 953 aaKnown RBP16.34■□□□□ 0.21
LINC00639-201ENST00000553932 CPSF1Q10570 1443 aaKnown RBP16.34■□□□□ 0.21
LINC00639-201ENST00000553932 RIMBP3CA6NJZ7 1639 aa16.33■□□□□ 0.21
LINC00639-201ENST00000553932 RIMBP3BA6NNM3 1639 aa16.33■□□□□ 0.21
LINC00639-201ENST00000553932 RIMBP3Q9UFD9 1639 aa16.33■□□□□ 0.21
LINC00639-201ENST00000553932 VWDEQ8N2E2 1590 aa16.33■□□□□ 0.21
LINC00639-201ENST00000553932 EEF2P13639 858 aaKnown RBP16.33■□□□□ 0.21
LINC00639-201ENST00000553932 PHKG2P15735 406 aa16.33■□□□□ 0.21
LINC00639-201ENST00000553932 CYP7A1P22680 504 aa16.33■□□□□ 0.21
LINC00639-201ENST00000553932 DRP2Q13474 957 aa16.33■□□□□ 0.21
LINC00639-201ENST00000553932 LETM2Q2VYF4 491 aa16.33■□□□□ 0.21
LINC00639-201ENST00000553932 AMFRQ9UKV5 643 aa16.33■□□□□ 0.21
LINC00639-201ENST00000553932 HOXB7P09629 217 aa16.33■□□□□ 0.2
LINC00639-201ENST00000553932 NAPAP54920 295 aa16.33■□□□□ 0.2
LINC00639-201ENST00000553932 PLTPP55058 493 aa16.33■□□□□ 0.2
LINC00639-201ENST00000553932 ZNF449Q6P9G9 518 aa16.33■□□□□ 0.2
LINC00639-201ENST00000553932 CCNI2Q6ZMN8 369 aaPredicted RBP16.33■□□□□ 0.2
LINC00639-201ENST00000553932 METTL22Q9BUU2 404 aaPredicted RBP16.33■□□□□ 0.2
LINC00639-201ENST00000553932 UQCRFS1P1P0C7P4 283 aa16.33■□□□□ 0.2
LINC00639-201ENST00000553932 TROVE2P10155 538 aaKnown RBP eCLIP16.33■□□□□ 0.2
LINC00639-201ENST00000553932 MDH1P40925 334 aaKnown RBP16.33■□□□□ 0.2
LINC00639-201ENST00000553932 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.33■□□□□ 0.2
LINC00639-201ENST00000553932 CYB5D1Q6P9G0 228 aa16.33■□□□□ 0.2
LINC00639-201ENST00000553932 TRMT1LQ7Z2T5 733 aaKnown RBP16.33■□□□□ 0.2
LINC00639-201ENST00000553932 PDE4BQ07343 736 aa16.33■□□□□ 0.2
LINC00639-201ENST00000553932 GCKRQ14397 625 aa16.33■□□□□ 0.2
LINC00639-201ENST00000553932 PDCD2Q16342 344 aaPredicted RBP16.33■□□□□ 0.2
LINC00639-201ENST00000553932 CCDC13Q8IYE1 715 aa16.33■□□□□ 0.2
LINC00639-201ENST00000553932 SYCE1Q8N0S2 351 aa16.33■□□□□ 0.2
LINC00639-201ENST00000553932 MORC4Q8TE76 937 aa16.33■□□□□ 0.2
LINC00639-201ENST00000553932 RTL9Q8NET4 1388 aa16.32■□□□□ 0.2
LINC00639-201ENST00000553932 RPN1P04843 607 aaKnown RBP16.32■□□□□ 0.2
LINC00639-201ENST00000553932 ATP2A2P16615 1042 aaKnown RBP16.32■□□□□ 0.2
LINC00639-201ENST00000553932 CCDC110Q8TBZ0 833 aa16.32■□□□□ 0.2
LINC00639-201ENST00000553932 GPHNQ9NQX3 736 aaPredicted RBP16.32■□□□□ 0.2
LINC00639-201ENST00000553932 GTPBP6O43824 516 aaPredicted RBP16.32■□□□□ 0.2
LINC00639-201ENST00000553932 DESP17661 470 aa16.32■□□□□ 0.2
LINC00639-201ENST00000553932 UBL4BQ8N7F7 174 aa16.32■□□□□ 0.2
LINC00639-201ENST00000553932 LRRC1Q9BTT6 524 aa16.32■□□□□ 0.2
LINC00639-201ENST00000553932 TNFAIP3P21580 790 aa16.32■□□□□ 0.2
LINC00639-201ENST00000553932 DYNC1I2Q13409 638 aaKnown RBP16.32■□□□□ 0.2
LINC00639-201ENST00000553932 CCDC65Q8IXS2 484 aa16.32■□□□□ 0.2
LINC00639-201ENST00000553932 CTTNBP2NLQ9P2B4 639 aa16.32■□□□□ 0.2
LINC00639-201ENST00000553932 TARSL2A2RTX5 802 aaKnown RBP16.31■□□□□ 0.2
LINC00639-201ENST00000553932 ARHGAP42A6NI28 874 aa16.31■□□□□ 0.2
LINC00639-201ENST00000553932 CASQ2O14958 399 aaPredicted RBP16.31■□□□□ 0.2
LINC00639-201ENST00000553932 MBD4O95243 580 aa16.31■□□□□ 0.2
LINC00639-201ENST00000553932 CDC25AP30304 524 aa16.31■□□□□ 0.2
LINC00639-201ENST00000553932 RAD9BQ6WBX8 426 aa16.31■□□□□ 0.2
LINC00639-201ENST00000553932 TC2NQ8N9U0 490 aa16.31■□□□□ 0.2
LINC00639-201ENST00000553932 IQCDQ96DY2 449 aa16.31■□□□□ 0.2
LINC00639-201ENST00000553932 CALM1P0DP23 149 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms