RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 PUS10Q3MIT2 529 aaKnown RBP16.48■□□□□ 0.23
SNRPF-203ENST00000551316 TCEAL5Q5H9L2 206 aa16.48■□□□□ 0.23
SNRPF-203ENST00000551316 FBXL6Q8N531 539 aa16.48■□□□□ 0.23
SNRPF-203ENST00000551316 CNTNAP3BQ96NU0 1288 aa16.48■□□□□ 0.23
SNRPF-203ENST00000551316 CNTNAP3Q9BZ76 1288 aa16.48■□□□□ 0.23
SNRPF-203ENST00000551316 RALGAPA2Q2PPJ7 1873 aa16.48■□□□□ 0.23
SNRPF-203ENST00000551316 KIF28PB7ZC32 967 aa16.47■□□□□ 0.23
SNRPF-203ENST00000551316 EP400NLQ6ZTU2 488 aa16.47■□□□□ 0.23
SNRPF-203ENST00000551316 CCDC144CPQ8IYA2 1237 aa16.47■□□□□ 0.23
SNRPF-203ENST00000551316 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.47■□□□□ 0.23
SNRPF-203ENST00000551316 TGS1Q96RS0 853 aaKnown RBP16.47■□□□□ 0.23
SNRPF-203ENST00000551316 FSD1Q9BTV5 496 aa16.47■□□□□ 0.23
SNRPF-203ENST00000551316 ABHD16BQ9H3Z7 469 aa16.47■□□□□ 0.23
SNRPF-203ENST00000551316 VCPKMTQ9H867 229 aa16.47■□□□□ 0.23
SNRPF-203ENST00000551316 WDR46O15213 610 aaKnown RBP16.46■□□□□ 0.23
SNRPF-203ENST00000551316 IQCF3P0C7M6 154 aa16.46■□□□□ 0.23
SNRPF-203ENST00000551316 SUGP1Q8IWZ8 645 aaKnown RBP16.46■□□□□ 0.23
SNRPF-203ENST00000551316 PABPC5Q96DU9 382 aaKnown RBP16.46■□□□□ 0.23
SNRPF-203ENST00000551316 FTOQ9C0B1 505 aaKnown RBP eCLIP16.46■□□□□ 0.236e-9■□□□□ 9.7
SNRPF-203ENST00000551316 PPP1R9AQ9ULJ8 1098 aa16.46■□□□□ 0.23
SNRPF-203ENST00000551316 TRPC6Q9Y210 931 aa16.46■□□□□ 0.23
SNRPF-203ENST00000551316 CEP250Q9BV73 2442 aa16.45■□□□□ 0.22
SNRPF-203ENST00000551316 CABYRO75952 493 aa16.45■□□□□ 0.22
SNRPF-203ENST00000551316 CYP2D6P10635 497 aa16.45■□□□□ 0.22
SNRPF-203ENST00000551316 SMPD1P17405 629 aa16.45■□□□□ 0.22
SNRPF-203ENST00000551316 USP5P45974 858 aa16.45■□□□□ 0.22
SNRPF-203ENST00000551316 TNFAIP2Q03169 654 aa16.45■□□□□ 0.22
SNRPF-203ENST00000551316 SMAD2Q15796 467 aaKnown RBP16.45■□□□□ 0.22
SNRPF-203ENST00000551316 SNRNP48Q6IEG0 339 aaKnown RBP16.45■□□□□ 0.22
SNRPF-203ENST00000551316 FAM117BQ6P1L5 589 aa16.45■□□□□ 0.22
SNRPF-203ENST00000551316 ZNF467Q7Z7K2 595 aaPredicted RBP16.45■□□□□ 0.22
SNRPF-203ENST00000551316 PRRX2Q99811 253 aa16.45■□□□□ 0.22
SNRPF-203ENST00000551316 PRKRIP1Q9H875 184 aaPredicted RBP16.45■□□□□ 0.22
SNRPF-203ENST00000551316 PDGFCQ9NRA1 345 aa16.45■□□□□ 0.22
SNRPF-203ENST00000551316 TMX2Q9Y320 296 aa16.45■□□□□ 0.22
SNRPF-203ENST00000551316 MBTPS2O43462 519 aa16.44■□□□□ 0.22
SNRPF-203ENST00000551316 PDGFBP01127 241 aaPredicted RBP16.44■□□□□ 0.22
SNRPF-203ENST00000551316 AKR1B1P15121 316 aa16.44■□□□□ 0.22
SNRPF-203ENST00000551316 CNTN2Q02246 1040 aa16.44■□□□□ 0.22
SNRPF-203ENST00000551316 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
SNRPF-203ENST00000551316 RPAINQ86UA6 219 aa16.44■□□□□ 0.22
SNRPF-203ENST00000551316 MRPL38Q96DV4 380 aaKnown RBP16.44■□□□□ 0.22
SNRPF-203ENST00000551316 DDX11Q96FC9 970 aa16.44■□□□□ 0.22
SNRPF-203ENST00000551316 UPF3BQ9BZI7 483 aaKnown RBP16.44■□□□□ 0.22
SNRPF-203ENST00000551316 CLDND1Q9NY35 253 aa16.44■□□□□ 0.22
SNRPF-203ENST00000551316 CHD8Q9HCK8 2581 aa16.44■□□□□ 0.22
SNRPF-203ENST00000551316 PKD1L2Q7Z442 2459 aa16.44■□□□□ 0.22
SNRPF-203ENST00000551316 ATRXP46100 2492 aa16.43■□□□□ 0.22
SNRPF-203ENST00000551316 GJB5O95377 273 aa16.43■□□□□ 0.22
SNRPF-203ENST00000551316 CYP7A1P22680 504 aa16.43■□□□□ 0.22
SNRPF-203ENST00000551316 FAM83BQ5T0W9 1011 aa16.43■□□□□ 0.22
SNRPF-203ENST00000551316 NOL8Q76FK4 1167 aaKnown RBP16.43■□□□□ 0.22
SNRPF-203ENST00000551316 FBXO22Q8NEZ5 403 aa16.43■□□□□ 0.22
SNRPF-203ENST00000551316 ASIC4Q96FT7 647 aa16.43■□□□□ 0.22
SNRPF-203ENST00000551316 NUP88Q99567 741 aaPredicted RBP16.43■□□□□ 0.22
SNRPF-203ENST00000551316 MYH4Q9Y623 1939 aa16.43■□□□□ 0.22
SNRPF-203ENST00000551316 EP300Q09472 2414 aaPredicted RBP16.43■□□□□ 0.22
SNRPF-203ENST00000551316 DYNC1LI2O43237 492 aaPredicted RBP16.42■□□□□ 0.22
SNRPF-203ENST00000551316 TBX10O75333 385 aa16.42■□□□□ 0.22
SNRPF-203ENST00000551316 BAIAP3O94812 1187 aa16.42■□□□□ 0.22
SNRPF-203ENST00000551316 UBTFL1P0CB47 393 aaPredicted RBP16.42■□□□□ 0.22
SNRPF-203ENST00000551316 RFC2P35250 354 aa16.42■□□□□ 0.22
SNRPF-203ENST00000551316 ZAP70P43403 619 aa16.42■□□□□ 0.22
SNRPF-203ENST00000551316 KCNJ6P48051 423 aa16.42■□□□□ 0.22
SNRPF-203ENST00000551316 SLC4A3P48751 1232 aa16.42■□□□□ 0.22
SNRPF-203ENST00000551316 ZXDAP98168 799 aa16.42■□□□□ 0.22
SNRPF-203ENST00000551316 ICA1Q05084 483 aa16.42■□□□□ 0.22
SNRPF-203ENST00000551316 MAGEB6Q8N7X4 407 aa16.42■□□□□ 0.22
SNRPF-203ENST00000551316 BANK1Q8NDB2 785 aa16.42■□□□□ 0.22
SNRPF-203ENST00000551316 RMDN1Q96DB5 314 aa16.42■□□□□ 0.22
SNRPF-203ENST00000551316 ZBED2Q9BTP6 218 aa16.42■□□□□ 0.22
SNRPF-203ENST00000551316 AKAP2Q9Y2D5 859 aa16.42■□□□□ 0.22
SNRPF-203ENST00000551316 SPTBN2O15020 2390 aa16.41■□□□□ 0.22
SNRPF-203ENST00000551316 AVPR2P30518 371 aa16.41■□□□□ 0.22
SNRPF-203ENST00000551316 GORABQ5T7V8 394 aa16.41■□□□□ 0.22
SNRPF-203ENST00000551316 TTC6Q86TZ1 520 aa16.41■□□□□ 0.22
SNRPF-203ENST00000551316 DYNLL2Q96FJ2 89 aa16.41■□□□□ 0.22
SNRPF-203ENST00000551316 CTAGE1Q96RT6 745 aa16.41■□□□□ 0.22
SNRPF-203ENST00000551316 TEX13BQ9BXU2 312 aa16.41■□□□□ 0.22
SNRPF-203ENST00000551316 GTF2F1P35269 517 aaKnown RBP eCLIP16.4■□□□□ 0.22
SNRPF-203ENST00000551316 NBL1P41271 181 aa16.4■□□□□ 0.22
SNRPF-203ENST00000551316 TIGD5Q53EQ6 642 aa16.4■□□□□ 0.22
SNRPF-203ENST00000551316 TMEM179Q6ZVK1 233 aa16.4■□□□□ 0.22
SNRPF-203ENST00000551316 WDR63Q8IWG1 891 aa16.4■□□□□ 0.22
SNRPF-203ENST00000551316 FBXO16Q8IX29 292 aaPredicted RBP16.4■□□□□ 0.22
SNRPF-203ENST00000551316 RAD9AQ99638 391 aa16.4■□□□□ 0.22
SNRPF-203ENST00000551316 RALYQ9UKM9 306 aaKnown RBP16.4■□□□□ 0.22
SNRPF-203ENST00000551316 PTPRCP08575 1304 aa16.4■□□□□ 0.22
SNRPF-203ENST00000551316 KIAA1671Q9BY89 1806 aa16.4■□□□□ 0.22
SNRPF-203ENST00000551316 PITPNM1O00562 1244 aa16.39■□□□□ 0.21
SNRPF-203ENST00000551316 LINC01565O15544 149 aa16.39■□□□□ 0.21
SNRPF-203ENST00000551316 CTC1Q2NKJ3 1217 aa16.39■□□□□ 0.21
SNRPF-203ENST00000551316 PPP4R3CPQ6ZMV5 832 aa16.39■□□□□ 0.21
SNRPF-203ENST00000551316 FRMD5Q7Z6J6 570 aa16.39■□□□□ 0.21
SNRPF-203ENST00000551316 FAM133AQ8N9E0 248 aa16.39■□□□□ 0.21
SNRPF-203ENST00000551316 DBNDD2Q9BQY9 259 aa16.39■□□□□ 0.21
SNRPF-203ENST00000551316 RIOK1Q9BRS2 568 aaKnown RBP16.39■□□□□ 0.21
SNRPF-203ENST00000551316 STXBP3O00186 592 aa16.38■□□□□ 0.21
SNRPF-203ENST00000551316 KDM4AO75164 1064 aa16.38■□□□□ 0.21
SNRPF-203ENST00000551316 UQCRFS1P1P0C7P4 283 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms