RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 PRPHP41219 470 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 ADAT2Q7Z6V5 191 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 RETREG2Q8NC44 543 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 NOA1Q8NC60 698 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 ZNF446Q9NWS9 450 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 FEZ2Q9UHY8 353 aaPredicted RBP11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 FAM13AO94988 1023 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 RPL13P26373 211 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 NNTQ13423 1086 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 TMEM132AQ24JP5 1023 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 TPTE2Q6XPS3 522 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 NEK8Q86SG6 692 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 SMCR8Q8TEV9 937 aaPredicted RBP11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 PTPRUQ92729 1446 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 FUT8Q9BYC5 575 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 CCDC87Q9NVE4 849 aa11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 ADD3Q9UEY8 706 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-209ENST00000550164 CCNE1P24864 410 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 ZRSR2Q15696 482 aaKnown RBP11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 CCDC170Q8IYT3 715 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 FNBP4Q8N3X1 1017 aaPredicted RBP11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 IGDCC4Q8TDY8 1250 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 IL17RAQ96F46 866 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 ANKRD2Q9GZV1 360 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 ARPP21Q9UBL0 812 aaPredicted RBP11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 MROH1Q8NDA8 1641 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 LGALS16A8MUM7 142 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 KRIT1O00522 736 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 FLOT1O75955 427 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 ADCY7P51828 1080 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 KIF11P52732 1056 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 USP14P54578 494 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 NAA35Q5VZE5 725 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 ICE2Q659A1 982 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 ZNF804AQ7Z570 1209 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 ILDR1Q86SU0 546 aaPredicted RBP11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 TADA2BQ86TJ2 420 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 IQCDQ96DY2 449 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 DISC1Q9NRI5 854 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 SPDYE3A6NKU9 549 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 GSG1L2A8MUP6 293 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 EPB41P11171 864 aaKnown RBP11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 PLCG1P19174 1290 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 GJC1P36383 396 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 CALCOCO2Q13137 446 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 PPP1R7Q15435 360 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 UHMK1Q8TAS1 419 aaKnown RBP11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 STAG1Q8WVM7 1258 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 PLVAPQ9BX97 442 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 STMN4Q9H169 189 aaPredicted RBP11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 NUCKS1Q9H1E3 243 aaKnown RBP11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 CPDO75976 1380 aa11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 NPHP4O75161 1426 aaPredicted RBP11.29□□□□□ -0.6
SMARCC2-209ENST00000550164 ABCB4P21439 1286 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 MMS19Q96T76 1030 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 MYCBPQ99417 103 aaPredicted RBP11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 PCDHA4Q9UN74 947 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 PCDHA13Q9Y5I0 950 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 FAM169AQ9Y6X4 670 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 POTEJP0CG39 1038 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 TNFAIP3P21580 790 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 CLNS1AP54105 237 aaKnown RBP11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 PTPAQ15257 358 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 RASGRP2Q7LDG7 609 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 CACNA2D3Q8IZS8 1091 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 ENAHQ8N8S7 591 aaPredicted RBP11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 PNKPQ96T60 521 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 THAP9Q9H5L6 903 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 NFU1Q9UMS0 254 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 PP2D1A8MPX8 630 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 RFC4P35249 363 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 TNIP1Q15025 636 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 TRIM65Q6PJ69 517 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 COG1Q8WTW3 980 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 MLXIPQ9HAP2 919 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 PCDHB13Q9Y5F0 798 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 ABCC12Q96J65 1359 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 ACTN4O43707 911 aaKnown RBP11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 GYPCP04921 128 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 KRT26Q7Z3Y9 468 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 U2AF1L4Q8WU68 220 aaKnown RBP11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 RSRC1Q96IZ7 334 aaKnown RBP11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 EYA3Q99504 573 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 POLD4Q9HCU8 107 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 SWAP70Q9UH65 585 aa11.28□□□□□ -0.6
SMARCC2-209ENST00000550164 A0A1B0GUA9 196 aa11.27□□□□□ -0.6
SMARCC2-209ENST00000550164 ZNF185O15231 689 aa11.27□□□□□ -0.6
SMARCC2-209ENST00000550164 NMT2O60551 498 aa11.27□□□□□ -0.6
SMARCC2-209ENST00000550164 PLCG2P16885 1265 aa11.27□□□□□ -0.6
SMARCC2-209ENST00000550164 FAM26FQ5R3K3 315 aa11.27□□□□□ -0.6
SMARCC2-209ENST00000550164 STIM2Q9P246 746 aa11.27□□□□□ -0.6
SMARCC2-209ENST00000550164 TFR2Q9UP52 801 aa11.27□□□□□ -0.6
SMARCC2-209ENST00000550164 ESYT3A0FGR9 886 aa11.27□□□□□ -0.61
SMARCC2-209ENST00000550164 HSPA2P54652 639 aa11.27□□□□□ -0.61
SMARCC2-209ENST00000550164 RPS8P62241 208 aaKnown RBP11.27□□□□□ -0.61
SMARCC2-209ENST00000550164 MAN2A1Q16706 1144 aa11.27□□□□□ -0.61
SMARCC2-209ENST00000550164 TMTC3Q6ZXV5 915 aa11.27□□□□□ -0.61
SMARCC2-209ENST00000550164 HOOK3Q86VS8 718 aa11.27□□□□□ -0.61
SMARCC2-209ENST00000550164 NDST4Q9H3R1 872 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms