RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 CNGB1Q14028 1251 aaPredicted RBP9.35□□□□□ -0.91
CHPT1-203ENST00000546873 TMEM40Q8WWA1 233 aa9.35□□□□□ -0.91
CHPT1-203ENST00000546873 UBE2FQ969M7 185 aa9.35□□□□□ -0.91
CHPT1-203ENST00000546873 ACSF2Q96CM8 615 aaPredicted RBP9.35□□□□□ -0.91
CHPT1-203ENST00000546873 CEP131Q9UPN4 1083 aa9.35□□□□□ -0.91
CHPT1-203ENST00000546873 ABCC11Q96J66 1382 aa9.35□□□□□ -0.91
CHPT1-203ENST00000546873 ADGRB2O60241 1585 aa9.34□□□□□ -0.91
CHPT1-203ENST00000546873 CHMP4BP1P59074 171 aa9.34□□□□□ -0.91
CHPT1-203ENST00000546873 TAGLNQ01995 201 aaKnown RBP9.34□□□□□ -0.91
CHPT1-203ENST00000546873 KCNMB1Q16558 191 aa9.34□□□□□ -0.91
CHPT1-203ENST00000546873 ZSWIM9Q86XI8 627 aa9.34□□□□□ -0.91
CHPT1-203ENST00000546873 KRTAP19-1Q8IUB9 90 aa9.34□□□□□ -0.91
CHPT1-203ENST00000546873 CYB5D2Q8WUJ1 264 aa9.34□□□□□ -0.91
CHPT1-203ENST00000546873 PRAM1Q96QH2 718 aa9.34□□□□□ -0.91
CHPT1-203ENST00000546873 BCL2L13Q9BXK5 485 aa9.34□□□□□ -0.91
CHPT1-203ENST00000546873 SPON1Q9HCB6 807 aa9.34□□□□□ -0.91
CHPT1-203ENST00000546873 ST14Q9Y5Y6 855 aa9.34□□□□□ -0.91
CHPT1-203ENST00000546873 PLCH1Q4KWH8 1693 aa9.34□□□□□ -0.91
CHPT1-203ENST00000546873 NSD2O96028 1365 aa9.34□□□□□ -0.91
CHPT1-203ENST00000546873 ANKRD36BQ8N2N9 1353 aa9.34□□□□□ -0.91
CHPT1-203ENST00000546873 NSD3Q9BZ95 1437 aa9.33□□□□□ -0.92
CHPT1-203ENST00000546873 MINDY4BA8MYZ0 360 aa9.33□□□□□ -0.92
CHPT1-203ENST00000546873 KCNQ2O43526 872 aa9.33□□□□□ -0.92
CHPT1-203ENST00000546873 F13A1P00488 732 aa9.33□□□□□ -0.92
CHPT1-203ENST00000546873 TNNI2P48788 182 aa9.33□□□□□ -0.92
CHPT1-203ENST00000546873 KRTAP1-3Q8IUG1 177 aa9.33□□□□□ -0.92
CHPT1-203ENST00000546873 TRIT1Q9H3H1 467 aaKnown RBP9.33□□□□□ -0.92
CHPT1-203ENST00000546873 FAM53CQ9NYF3 392 aa9.33□□□□□ -0.92
CHPT1-203ENST00000546873 KCNH3Q9ULD8 1083 aa9.33□□□□□ -0.92
CHPT1-203ENST00000546873 CTNND2Q9UQB3 1225 aa9.33□□□□□ -0.92
CHPT1-203ENST00000546873 CORINQ9Y5Q5 1042 aa9.33□□□□□ -0.92
CHPT1-203ENST00000546873 SPATA31A3Q5VYP0 1347 aa9.32□□□□□ -0.92
CHPT1-203ENST00000546873 FAM221AA4D161 298 aa9.32□□□□□ -0.92
CHPT1-203ENST00000546873 FARP2O94887 1054 aaPredicted RBP9.32□□□□□ -0.92
CHPT1-203ENST00000546873 FAM160A1Q05DH4 1040 aa9.32□□□□□ -0.92
CHPT1-203ENST00000546873 TNK2Q07912 1038 aa9.32□□□□□ -0.92
CHPT1-203ENST00000546873 SAFB2Q14151 953 aaKnown RBP eCLIP9.32□□□□□ -0.92
CHPT1-203ENST00000546873 TMEM201Q5SNT2 666 aa9.32□□□□□ -0.92
CHPT1-203ENST00000546873 CC2D1BQ5T0F9 858 aaKnown RBP9.32□□□□□ -0.92
CHPT1-203ENST00000546873 TMPRSS7Q7RTY8 843 aa9.32□□□□□ -0.92
CHPT1-203ENST00000546873 GOLM1Q8NBJ4 401 aa9.32□□□□□ -0.92
CHPT1-203ENST00000546873 RHOVQ96L33 236 aa9.32□□□□□ -0.92
CHPT1-203ENST00000546873 ATP7BP35670 1465 aa9.32□□□□□ -0.92
CHPT1-203ENST00000546873 CGNL1Q0VF96 1302 aa9.31□□□□□ -0.92
CHPT1-203ENST00000546873 BTBD11A6QL63 1104 aa9.31□□□□□ -0.92
CHPT1-203ENST00000546873 FAM9BQ8IZU0 186 aa9.31□□□□□ -0.92
CHPT1-203ENST00000546873 DNAJB8Q8NHS0 232 aa9.31□□□□□ -0.92
CHPT1-203ENST00000546873 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.31□□□□□ -0.92
CHPT1-203ENST00000546873 ITSN1Q15811 1721 aa9.31□□□□□ -0.92
CHPT1-203ENST00000546873 ANKRD26Q9UPS8 1709 aa9.31□□□□□ -0.92
CHPT1-203ENST00000546873 FAM83GA6ND36 823 aa9.3□□□□□ -0.92
CHPT1-203ENST00000546873 RAC2P15153 192 aa9.3□□□□□ -0.92
CHPT1-203ENST00000546873 MPP2Q14168 576 aa9.3□□□□□ -0.92
CHPT1-203ENST00000546873 PKN1Q16512 942 aa9.3□□□□□ -0.92
CHPT1-203ENST00000546873 GIPC2Q8TF65 315 aa9.3□□□□□ -0.92
CHPT1-203ENST00000546873 SLC38A3Q99624 504 aa9.3□□□□□ -0.92
CHPT1-203ENST00000546873 GPATCH2Q9NW75 528 aa9.3□□□□□ -0.92
CHPT1-203ENST00000546873 TERF2IPQ9NYB0 399 aa9.3□□□□□ -0.92
CHPT1-203ENST00000546873 REV1Q9UBZ9 1251 aa9.3□□□□□ -0.92
CHPT1-203ENST00000546873 KLHL3Q9UH77 587 aa9.3□□□□□ -0.92
CHPT1-203ENST00000546873 KIF20BQ96Q89 1820 aa9.3□□□□□ -0.92
CHPT1-203ENST00000546873 NUP188Q5SRE5 1749 aa9.3□□□□□ -0.92
CHPT1-203ENST00000546873 INSRP06213 1382 aa9.29□□□□□ -0.92
CHPT1-203ENST00000546873 NWD2Q9ULI1 1742 aa9.29□□□□□ -0.92
CHPT1-203ENST00000546873 C8AP07357 584 aa9.29□□□□□ -0.92
CHPT1-203ENST00000546873 GDNFP39905 211 aa9.29□□□□□ -0.92
CHPT1-203ENST00000546873 HDGFL2Q7Z4V5 671 aaPredicted RBP9.29□□□□□ -0.92
CHPT1-203ENST00000546873 KIRREL1Q96J84 757 aa9.29□□□□□ -0.92
CHPT1-203ENST00000546873 ALPK1Q96QP1 1244 aa9.29□□□□□ -0.92
CHPT1-203ENST00000546873 RREB1Q92766 1687 aa9.29□□□□□ -0.92
CHPT1-203ENST00000546873 ZBED9Q6R2W3 1325 aa9.29□□□□□ -0.92
CHPT1-203ENST00000546873 NRKQ7Z2Y5 1582 aa9.29□□□□□ -0.92
CHPT1-203ENST00000546873 UPK3BL1B0FP48 263 aa9.28□□□□□ -0.92
CHPT1-203ENST00000546873 UPK3BL2E5RIL1 263 aa9.28□□□□□ -0.92
CHPT1-203ENST00000546873 GRIN3BO60391 1043 aa9.28□□□□□ -0.92
CHPT1-203ENST00000546873 CWF19L2Q2TBE0 894 aaKnown RBP9.28□□□□□ -0.92
CHPT1-203ENST00000546873 KSR1Q8IVT5 923 aa9.28□□□□□ -0.92
CHPT1-203ENST00000546873 SLFN12Q8IYM2 578 aa9.28□□□□□ -0.92
CHPT1-203ENST00000546873 SYTL4Q96C24 671 aaPredicted RBP9.28□□□□□ -0.92
CHPT1-203ENST00000546873 CCDC74BQ96LY2 380 aa9.28□□□□□ -0.92
CHPT1-203ENST00000546873 KBTBD4Q9NVX7 518 aa9.28□□□□□ -0.92
CHPT1-203ENST00000546873 SLAMF8Q9P0V8 285 aa9.28□□□□□ -0.92
CHPT1-203ENST00000546873 CDC42BPGQ6DT37 1551 aa9.28□□□□□ -0.92
CHPT1-203ENST00000546873 NRAPQ86VF7 1730 aa9.28□□□□□ -0.92
CHPT1-203ENST00000546873 A0A1W2PP64 1363 aa9.27□□□□□ -0.93
CHPT1-203ENST00000546873 TOPAZ1Q8N9V7 1692 aa9.27□□□□□ -0.93
CHPT1-203ENST00000546873 LRRC10BA6NIK2 292 aa9.27□□□□□ -0.93
CHPT1-203ENST00000546873 HTR3BO95264 441 aa9.27□□□□□ -0.93
CHPT1-203ENST00000546873 WDR43Q15061 677 aaKnown RBP eCLIP9.27□□□□□ -0.93
CHPT1-203ENST00000546873 TMEM67Q5HYA8 995 aa9.27□□□□□ -0.93
CHPT1-203ENST00000546873 FAM196AQ6ZSG2 479 aa9.27□□□□□ -0.93
CHPT1-203ENST00000546873 KRT28Q7Z3Y7 464 aa9.27□□□□□ -0.93
CHPT1-203ENST00000546873 CREG2Q8IUH2 290 aa9.27□□□□□ -0.93
CHPT1-203ENST00000546873 PHACTR4Q8IZ21 702 aa9.27□□□□□ -0.93
CHPT1-203ENST00000546873 PDGFDQ9GZP0 370 aaPredicted RBP9.27□□□□□ -0.93
CHPT1-203ENST00000546873 BTG4Q9NY30 223 aa9.27□□□□□ -0.93
CHPT1-203ENST00000546873 SUPT16HQ9Y5B9 1047 aaKnown RBP9.27□□□□□ -0.93
CHPT1-203ENST00000546873 PRR36Q9H6K5 1346 aa9.27□□□□□ -0.93
CHPT1-203ENST00000546873 THSD7AQ9UPZ6 1657 aa9.26□□□□□ -0.93
CHPT1-203ENST00000546873 PLEKHH1Q9ULM0 1364 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms