RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 NR2E3Q9Y5X4 410 aa11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 FRMPD2Q68DX3 1309 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 DNAH12Q6ZR08 3092 aa11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 SEPT4O43236 478 aa11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 CYP21A2P08686 494 aa11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 SNHG28P0DPA3 235 aa11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 ALAS1P13196 640 aa11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 ZNF543Q08ER8 600 aa11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 MAMDC4Q6UXC1 1216 aa11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 RASGRP2Q7LDG7 609 aa11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 ENAHQ8N8S7 591 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 ARRDC4Q8NCT1 418 aa11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 PNMA1Q8ND90 353 aa11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 CCDC136Q96JN2 1154 aa11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 UBAC1Q9BSL1 405 aa11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 RANBP17Q9H2T7 1088 aaKnown RBP11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 ACAD9Q9H845 621 aa11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 HOMER2Q9NSB8 354 aa11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 RNF146Q9NTX7 359 aa11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 PNMA2Q9UL42 364 aa11.41□□□□□ -0.58
TNFRSF1A-214ENST00000543048 H0YGN5 161 aa11.4□□□□□ -0.58
TNFRSF1A-214ENST00000543048 EVI5O60447 810 aa11.4□□□□□ -0.58
TNFRSF1A-214ENST00000543048 ICAM1P05362 532 aa11.4□□□□□ -0.58
TNFRSF1A-214ENST00000543048 BMP2KLQ5H9B9 411 aa11.4□□□□□ -0.58
TNFRSF1A-214ENST00000543048 GPATCH4Q5T3I0 446 aaKnown RBP11.4□□□□□ -0.58
TNFRSF1A-214ENST00000543048 CCPG1Q9ULG6 757 aa11.4□□□□□ -0.58
TNFRSF1A-214ENST00000543048 CNPY2Q9Y2B0 182 aa11.4□□□□□ -0.58
TNFRSF1A-214ENST00000543048 TNKSO95271 1327 aa11.39□□□□□ -0.59
TNFRSF1A-214ENST00000543048 SYNGAP1Q96PV0 1343 aa11.39□□□□□ -0.59
TNFRSF1A-214ENST00000543048 E7EWF7 191 aa11.39□□□□□ -0.59
TNFRSF1A-214ENST00000543048 SNAI1O95863 264 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-214ENST00000543048 COL6A1P12109 1028 aa11.39□□□□□ -0.59
TNFRSF1A-214ENST00000543048 IFIT1BQ5T764 474 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-214ENST00000543048 CYB5R4Q7L1T6 521 aa11.39□□□□□ -0.59
TNFRSF1A-214ENST00000543048 SKAP1Q86WV1 359 aa11.39□□□□□ -0.59
TNFRSF1A-214ENST00000543048 NCOA7Q8NI08 942 aa11.39□□□□□ -0.59
TNFRSF1A-214ENST00000543048 ESYT1Q9BSJ8 1104 aa11.39□□□□□ -0.59
TNFRSF1A-214ENST00000543048 SCUBE2Q9NQ36 999 aa11.39□□□□□ -0.59
TNFRSF1A-214ENST00000543048 RBM8AQ9Y5S9 174 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-214ENST00000543048 PFASO15067 1338 aa11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 PARP1P09874 1014 aaKnown RBP11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 ZNF865P0CJ78 1059 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 GOLGA8HP0CJ92 632 aa11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 TAL1P17542 331 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 CNTN2Q02246 1040 aa11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 SEC23AQ15436 765 aa11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 ASPRV1Q53RT3 343 aa11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 MUM1L1Q5H9M0 696 aa11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 GJC2Q5T442 439 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 ANO1Q5XXA6 986 aa11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 MAMSTRQ6ZN01 415 aa11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 RALYLQ86SE5 291 aaKnown RBP11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 FAM133AQ8N9E0 248 aa11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 SENP6Q9GZR1 1112 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 UBA5Q9GZZ9 404 aa11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 LSG1Q9H089 658 aaKnown RBP11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 A1CFQ9NQ94 594 aaKnown RBP11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 FAM184BQ9ULE4 1060 aa11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 LCTP09848 1927 aa11.38□□□□□ -0.59
TNFRSF1A-214ENST00000543048 ERICH2A1L162 156 aa11.37□□□□□ -0.59
TNFRSF1A-214ENST00000543048 SOWAHBA6NEL2 793 aa11.37□□□□□ -0.59
TNFRSF1A-214ENST00000543048 ASB14A6NK59 587 aa11.37□□□□□ -0.59
TNFRSF1A-214ENST00000543048 DNM1LO00429 736 aa11.37□□□□□ -0.59
TNFRSF1A-214ENST00000543048 IFIT3O14879 490 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-214ENST00000543048 RARBP10826 455 aa11.37□□□□□ -0.59
TNFRSF1A-214ENST00000543048 AKR1A1P14550 325 aa11.37□□□□□ -0.59
TNFRSF1A-214ENST00000543048 ACVR2BQ13705 512 aa11.37□□□□□ -0.59
TNFRSF1A-214ENST00000543048 NSMFQ6X4W1 530 aa11.37□□□□□ -0.59
TNFRSF1A-214ENST00000543048 FGD4Q96M96 766 aa11.37□□□□□ -0.59
TNFRSF1A-214ENST00000543048 ABHD16BQ9H3Z7 469 aa11.37□□□□□ -0.59
TNFRSF1A-214ENST00000543048 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF1A-214ENST00000543048 CYP39A1Q9NYL5 469 aa11.37□□□□□ -0.59
TNFRSF1A-214ENST00000543048 KBTBD13C9JR72 458 aa11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 BAATQ14032 418 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 SART3Q15020 963 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 LRRC41Q15345 812 aa11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 CASC1Q6TDU7 716 aa11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 STOX1Q6ZVD7 989 aa11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 ARMCX2Q7L311 632 aa11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 CCDC144CPQ8IYA2 1237 aa11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 ADGRF4Q8IZF3 695 aa11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 RGS22Q8NE09 1264 aa11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 CPVLQ9H3G5 476 aa11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 VAT1LQ9HCJ6 419 aa11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 XPNPEP3Q9NQH7 507 aa11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 PPP4R2Q9NY27 417 aa11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 ZHX1Q9UKY1 873 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 TAF6LQ9Y6J9 622 aa11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 MYH7BA7E2Y1 1941 aa11.36□□□□□ -0.59
TNFRSF1A-214ENST00000543048 WDR19Q8NEZ3 1342 aa11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 PALM3A6NDB9 673 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 SLC27A2O14975 620 aa11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 DUSP11O75319 330 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 WTAPQ15007 396 aa11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 NECTIN1Q15223 517 aa11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 LRRC26Q2I0M4 334 aa11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 CHST3Q7LGC8 479 aa11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 RNF180Q86T96 592 aa11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 C7orf61Q8IZ16 206 aa11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 IGDCC4Q8TDY8 1250 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms