RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 CCZ1P86791 482 aaPredicted RBP17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 TNFAIP1Q13829 316 aa17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 CCDC12Q8WUD4 166 aaPredicted RBP17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 DCAF4Q8WV16 495 aa17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 TEPSINQ96N21 525 aa17.34■□□□□ 0.37
CLPTM1-202ENST00000541297 H7C1D1 291 aa17.33■□□□□ 0.36
CLPTM1-202ENST00000541297 TBC1D12O60347 775 aa17.33■□□□□ 0.36
CLPTM1-202ENST00000541297 ZNF202O95125 648 aa17.33■□□□□ 0.36
CLPTM1-202ENST00000541297 SNAP25P60880 206 aa17.33■□□□□ 0.36
CLPTM1-202ENST00000541297 IKQ13123 557 aaPredicted RBP17.33■□□□□ 0.36
CLPTM1-202ENST00000541297 ZYXQ15942 572 aaKnown RBP17.33■□□□□ 0.36
CLPTM1-202ENST00000541297 DHX40Q8IX18 779 aaKnown RBP17.33■□□□□ 0.36
CLPTM1-202ENST00000541297 ZNF397Q8NF99 534 aaPredicted RBP17.33■□□□□ 0.36
CLPTM1-202ENST00000541297 TRPM4Q8TD43 1214 aa17.33■□□□□ 0.36
CLPTM1-202ENST00000541297 INF2Q27J81 1249 aa17.33■□□□□ 0.36
CLPTM1-202ENST00000541297 RESP18Q5W5W9 173 aa17.33■□□□□ 0.36
CLPTM1-202ENST00000541297 SDF4Q9BRK5 362 aa17.33■□□□□ 0.36
CLPTM1-202ENST00000541297 DEFB129Q9H1M3 183 aa17.33■□□□□ 0.36
CLPTM1-202ENST00000541297 C6orf50Q9HD87 102 aa17.33■□□□□ 0.36
CLPTM1-202ENST00000541297 PNMA6FA0A0J9YX94 578 aa17.32■□□□□ 0.36
CLPTM1-202ENST00000541297 PTPREP23469 700 aa17.32■□□□□ 0.36
CLPTM1-202ENST00000541297 CAP2P40123 477 aa17.32■□□□□ 0.36
CLPTM1-202ENST00000541297 PTGDRQ13258 359 aa17.32■□□□□ 0.36
CLPTM1-202ENST00000541297 PRAMEF18Q5VWM3 479 aa17.32■□□□□ 0.36
CLPTM1-202ENST00000541297 DAGLBQ8NCG7 672 aa17.32■□□□□ 0.36
CLPTM1-202ENST00000541297 GMCL1P1Q8NEA9 526 aa17.32■□□□□ 0.36
CLPTM1-202ENST00000541297 BIN2Q9UBW5 565 aaPredicted RBP17.32■□□□□ 0.36
CLPTM1-202ENST00000541297 POLR2AP24928 1970 aaKnown RBP17.32■□□□□ 0.36
CLPTM1-202ENST00000541297 CTAGE5O15320 804 aa17.32■□□□□ 0.36
CLPTM1-202ENST00000541297 YBX3P16989 372 aaKnown RBP eCLIP17.32■□□□□ 0.361e-8■■□□□ 13.2
CLPTM1-202ENST00000541297 SYKP43405 635 aa17.32■□□□□ 0.36
CLPTM1-202ENST00000541297 MMP14P50281 582 aa17.32■□□□□ 0.36
CLPTM1-202ENST00000541297 KIAA1755Q5JYT7 1200 aa17.32■□□□□ 0.36
CLPTM1-202ENST00000541297 GALNT17Q6IS24 598 aa17.32■□□□□ 0.36
CLPTM1-202ENST00000541297 ARHGEF10LQ9HCE6 1279 aa17.32■□□□□ 0.36
CLPTM1-202ENST00000541297 TMEM232C9JQI7 657 aa17.31■□□□□ 0.36
CLPTM1-202ENST00000541297 ZBTB5O15062 677 aa17.31■□□□□ 0.36
CLPTM1-202ENST00000541297 GNA11P29992 359 aa17.31■□□□□ 0.36
CLPTM1-202ENST00000541297 EPS15P42566 896 aa17.31■□□□□ 0.36
CLPTM1-202ENST00000541297 ANGEL2Q5VTE6 544 aaKnown RBP17.31■□□□□ 0.36
CLPTM1-202ENST00000541297 CCAR2Q8N163 923 aaKnown RBP17.31■□□□□ 0.36
CLPTM1-202ENST00000541297 GLIS2Q9BZE0 524 aaPredicted RBP17.31■□□□□ 0.36
CLPTM1-202ENST00000541297 CSRNP2Q9H175 543 aa17.31■□□□□ 0.36
CLPTM1-202ENST00000541297 TMEM260Q9NX78 707 aa17.31■□□□□ 0.36
CLPTM1-202ENST00000541297 GPRC5DQ9NZD1 345 aa17.31■□□□□ 0.36
CLPTM1-202ENST00000541297 SRPRBQ9Y5M8 271 aaKnown RBP17.31■□□□□ 0.36
CLPTM1-202ENST00000541297 ELF2Q15723 593 aa17.31■□□□□ 0.36
CLPTM1-202ENST00000541297 JAKMIP3Q5VZ66 844 aa17.31■□□□□ 0.36
CLPTM1-202ENST00000541297 ILDR2Q71H61 639 aa17.31■□□□□ 0.36
CLPTM1-202ENST00000541297 GPC2Q8N158 579 aa17.31■□□□□ 0.36
CLPTM1-202ENST00000541297 BMP3P12645 472 aa17.3■□□□□ 0.36
CLPTM1-202ENST00000541297 NBPF12Q5TAG4 269 aaPredicted RBP17.3■□□□□ 0.36
CLPTM1-202ENST00000541297 FBXO38Q6PIJ6 1188 aa17.3■□□□□ 0.36
CLPTM1-202ENST00000541297 USP49Q70CQ1 688 aa17.3■□□□□ 0.36
CLPTM1-202ENST00000541297 KRT222Q8N1A0 295 aa17.3■□□□□ 0.36
CLPTM1-202ENST00000541297 GMCL1Q96IK5 515 aa17.3■□□□□ 0.36
CLPTM1-202ENST00000541297 RNF181Q9P0P0 153 aa17.3■□□□□ 0.36
CLPTM1-202ENST00000541297 FZD1Q9UP38 647 aa17.3■□□□□ 0.36
CLPTM1-202ENST00000541297 HPSEQ9Y251 543 aa17.3■□□□□ 0.36
CLPTM1-202ENST00000541297 DDNO94850 711 aaPredicted RBP17.3■□□□□ 0.36
CLPTM1-202ENST00000541297 TRAPPC10P48553 1259 aa17.3■□□□□ 0.36
CLPTM1-202ENST00000541297 CDC37Q16543 378 aaPredicted RBP17.3■□□□□ 0.36
CLPTM1-202ENST00000541297 QRICH1Q2TAL8 776 aa17.3■□□□□ 0.36
CLPTM1-202ENST00000541297 PHF20L1A8MW92 1017 aa17.29■□□□□ 0.36
CLPTM1-202ENST00000541297 TERF2Q15554 542 aa17.29■□□□□ 0.36
CLPTM1-202ENST00000541297 REXO1Q8N1G1 1221 aaKnown RBP17.29■□□□□ 0.36
CLPTM1-202ENST00000541297 AOPEPQ8N6M6 819 aa17.29■□□□□ 0.36
CLPTM1-202ENST00000541297 ERO1AQ96HE7 468 aa17.29■□□□□ 0.36
CLPTM1-202ENST00000541297 ANO10Q9NW15 660 aa17.29■□□□□ 0.36
CLPTM1-202ENST00000541297 KCNH3Q9ULD8 1083 aa17.29■□□□□ 0.36
CLPTM1-202ENST00000541297 TMX2Q9Y320 296 aa17.29■□□□□ 0.36
CLPTM1-202ENST00000541297 SMCHD1A6NHR9 2005 aa17.29■□□□□ 0.36
CLPTM1-202ENST00000541297 VWA3AA6NCI4 1184 aa17.29■□□□□ 0.36
CLPTM1-202ENST00000541297 ADCY7P51828 1080 aa17.29■□□□□ 0.36
CLPTM1-202ENST00000541297 MAP3K10Q02779 954 aa17.29■□□□□ 0.36
CLPTM1-202ENST00000541297 MTMR8Q96EF0 704 aa17.29■□□□□ 0.36
CLPTM1-202ENST00000541297 hCG_1984214I3L0E3 225 aa17.28■□□□□ 0.36
CLPTM1-202ENST00000541297 TAL1P17542 331 aaPredicted RBP17.28■□□□□ 0.36
CLPTM1-202ENST00000541297 ATP2C1P98194 919 aaPredicted RBP17.28■□□□□ 0.36
CLPTM1-202ENST00000541297 UBE2SQ16763 222 aa17.28■□□□□ 0.36
CLPTM1-202ENST00000541297 FAM83BQ5T0W9 1011 aa17.28■□□□□ 0.36
CLPTM1-202ENST00000541297 SAMD1Q6SPF0 538 aaPredicted RBP17.28■□□□□ 0.36
CLPTM1-202ENST00000541297 PDILTQ8N807 584 aa17.28■□□□□ 0.36
CLPTM1-202ENST00000541297 ZNF713Q8N859 430 aaPredicted RBP17.28■□□□□ 0.36
CLPTM1-202ENST00000541297 ASNSP08243 561 aa17.28■□□□□ 0.36
CLPTM1-202ENST00000541297 EPSTI1Q96J88 318 aa17.28■□□□□ 0.36
CLPTM1-202ENST00000541297 GOPCQ9HD26 462 aa17.28■□□□□ 0.36
CLPTM1-202ENST00000541297 GGA3Q9NZ52 723 aa17.28■□□□□ 0.36
CLPTM1-202ENST00000541297 ESYT2A0FGR8 921 aa17.27■□□□□ 0.36
CLPTM1-202ENST00000541297 SLU7O95391 586 aaKnown RBP17.27■□□□□ 0.36
CLPTM1-202ENST00000541297 HIRAP54198 1017 aaPredicted RBP17.27■□□□□ 0.36
CLPTM1-202ENST00000541297 NONOQ15233 471 aaKnown RBP eCLIP17.27■□□□□ 0.36
CLPTM1-202ENST00000541297 LETM2Q2VYF4 491 aa17.27■□□□□ 0.36
CLPTM1-202ENST00000541297 LONRF3Q496Y0 759 aa17.27■□□□□ 0.36
CLPTM1-202ENST00000541297 SYDE2Q5VT97 1194 aa17.27■□□□□ 0.36
CLPTM1-202ENST00000541297 PCDHA1Q9Y5I3 950 aa17.27■□□□□ 0.36
CLPTM1-202ENST00000541297 POLR2DO15514 142 aaKnown RBP17.27■□□□□ 0.36
CLPTM1-202ENST00000541297 BMP15O95972 392 aa17.27■□□□□ 0.36
CLPTM1-202ENST00000541297 USH1GQ495M9 461 aa17.27■□□□□ 0.36
CLPTM1-202ENST00000541297 KRT25Q7Z3Z0 450 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms