RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 APPBP2Q92624 585 aa14.12□□□□□ -0.15
DDX55-206ENST00000539934 OSBP2Q969R2 916 aa14.12□□□□□ -0.15
DDX55-206ENST00000539934 GINM1Q9NU53 330 aa14.12□□□□□ -0.15
DDX55-206ENST00000539934 MKS1Q9NXB0 559 aa14.12□□□□□ -0.15
DDX55-206ENST00000539934 GGA3Q9NZ52 723 aa14.12□□□□□ -0.15
DDX55-206ENST00000539934 ODF2LQ9ULJ1 636 aa14.12□□□□□ -0.15
DDX55-206ENST00000539934 A0A1B0GUL6 1792 aa14.12□□□□□ -0.15
DDX55-206ENST00000539934 TBC1D8O95759 1140 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 CYP2E1P05181 493 aaPredicted RBP14.11□□□□□ -0.15
DDX55-206ENST00000539934 RPS6KB1P23443 525 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 PACS1Q6VY07 963 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 CELF1Q92879 486 aaKnown RBP14.11□□□□□ -0.15
DDX55-206ENST00000539934 SAAL1Q96ER3 474 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 ZSCAN31Q96LW9 406 aaPredicted RBP14.11□□□□□ -0.15
DDX55-206ENST00000539934 NEK1Q96PY6 1258 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 HPS5Q9UPZ3 1129 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 COL4A1P02462 1669 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 ATP8B1O43520 1251 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 IDH1O75874 414 aaKnown RBP14.11□□□□□ -0.15
DDX55-206ENST00000539934 SCRN1Q12765 414 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 GRAPQ13588 217 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 MICALCLQ6ZW33 695 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 MIGA1Q8NAN2 632 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 ATP11CQ8NB49 1132 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 GRAPLQ8TC17 118 aaPredicted RBP14.11□□□□□ -0.15
DDX55-206ENST00000539934 KIAA1524Q8TCG1 905 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 ZBTB10Q96DT7 871 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 POLLQ9UGP5 575 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 SWAP70Q9UH65 585 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.11□□□□□ -0.15
DDX55-206ENST00000539934 FHOD1Q9Y613 1164 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 LAMA4Q16363 1823 aa14.11□□□□□ -0.15
DDX55-206ENST00000539934 MYCLP1P12525 358 aaPredicted RBP14.1□□□□□ -0.15
DDX55-206ENST00000539934 ANKRD1Q15327 319 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 CLPPQ16740 277 aaPredicted RBP14.1□□□□□ -0.15
DDX55-206ENST00000539934 FBXO38Q6PIJ6 1188 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 UBE2Q1Q7Z7E8 422 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 MFN1Q8IWA4 741 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 VPS33BQ9H267 617 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 SH2B1Q9NRF2 756 aaPredicted RBP14.1□□□□□ -0.15
DDX55-206ENST00000539934 EXOC1Q9NV70 894 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 WDR37Q9Y2I8 494 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 DUOX1Q9NRD9 1551 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 GOLGA6L19H0YKK7 550 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 CCDC159P0C7I6 412 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 RANBP1P43487 201 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 SLC9C2Q5TAH2 1124 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 RCSD1Q6JBY9 416 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 CTU1Q7Z7A3 348 aaKnown RBP14.1□□□□□ -0.15
DDX55-206ENST00000539934 SPATA5Q8NB90 893 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 ERMNQ8TAM6 284 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 ENOX1Q8TC92 643 aaKnown RBP14.1□□□□□ -0.15
DDX55-206ENST00000539934 FBXW7Q969H0 707 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 DDX11Q96FC9 970 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 TCEANC2Q96MN5 208 aa14.1□□□□□ -0.15
DDX55-206ENST00000539934 ECE2O60344 883 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 LARGE1O95461 756 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 ADD2P35612 726 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 PLA2G4AP47712 749 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 KIF4BQ2VIQ3 1234 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 RSRC1Q96IZ7 334 aaKnown RBP14.09□□□□□ -0.15
DDX55-206ENST00000539934 PUS7LQ9H0K6 701 aaKnown RBP14.09□□□□□ -0.15
DDX55-206ENST00000539934 PIH1D3Q9NQM4 214 aaKnown RBP14.09□□□□□ -0.15
DDX55-206ENST00000539934 DOCK2Q92608 1830 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 BOLA2-SMG1P6H3BVE0 249 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 ATP6V1G1O75348 118 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 SLC10A3P09131 477 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 MSL3P1P0C860 447 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 RPL13P26373 211 aaKnown RBP14.09□□□□□ -0.15
DDX55-206ENST00000539934 ATICP31939 592 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 SLC8A3P57103 927 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 GPSM2P81274 684 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 ADCY1Q08828 1119 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 RASGRF1Q13972 1273 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 C4orf46Q504U0 113 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 CCDC83Q8IWF9 413 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 SULF1Q8IWU6 871 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 CDCA5Q96FF9 252 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 MAK16Q9BXY0 300 aaKnown RBP14.09□□□□□ -0.15
DDX55-206ENST00000539934 LRRC27Q9C0I9 530 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 SENP2Q9HC62 589 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 SAGE1Q9NXZ1 904 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 KLHL42Q9P2K6 505 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 HDAC9Q9UKV0 1011 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 MRFAP1Q9Y605 127 aa14.09□□□□□ -0.15
DDX55-206ENST00000539934 LAMA3Q16787 3333 aa14.08□□□□□ -0.16
DDX55-206ENST00000539934 ENPP1P22413 925 aa14.08□□□□□ -0.16
DDX55-206ENST00000539934 BCAMP50895 628 aa14.08□□□□□ -0.16
DDX55-206ENST00000539934 USP4Q13107 963 aa14.08□□□□□ -0.16
DDX55-206ENST00000539934 COL9A3Q14050 684 aaPredicted RBP14.08□□□□□ -0.16
DDX55-206ENST00000539934 WLSQ5T9L3 541 aa14.08□□□□□ -0.16
DDX55-206ENST00000539934 FAM76AQ8TAV0 307 aa14.08□□□□□ -0.16
DDX55-206ENST00000539934 ZNF296Q8WUU4 475 aaPredicted RBP14.08□□□□□ -0.16
DDX55-206ENST00000539934 JPH2Q9BR39 696 aaPredicted RBP14.08□□□□□ -0.16
DDX55-206ENST00000539934 ZDHHC9Q9Y397 364 aa14.08□□□□□ -0.16
DDX55-206ENST00000539934 CEP290O15078 2479 aa14.08□□□□□ -0.16
DDX55-206ENST00000539934 GPAA1O43292 621 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 AHCYL1O43865 530 aa14.07□□□□□ -0.16
DDX55-206ENST00000539934 EIF2B5Q13144 721 aaKnown RBP14.07□□□□□ -0.16
DDX55-206ENST00000539934 ME3Q16798 604 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms