RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 CCAR1Q8IX12 1150 aaKnown RBP20.32■□□□□ 0.84
CTSB-222ENST00000531551 ZNF713Q8N859 430 aaPredicted RBP20.32■□□□□ 0.84
CTSB-222ENST00000531551 MOV10L1Q9BXT6 1211 aaKnown RBP20.32■□□□□ 0.84
CTSB-222ENST00000531551 PNMA2Q9UL42 364 aa20.32■□□□□ 0.84
CTSB-222ENST00000531551 MRPL11Q9Y3B7 192 aaKnown RBP20.32■□□□□ 0.84
CTSB-222ENST00000531551 ABCB11O95342 1321 aa20.32■□□□□ 0.84
CTSB-222ENST00000531551 RLFQ13129 1914 aa20.32■□□□□ 0.84
CTSB-222ENST00000531551 SMCO2A6NFE2 343 aa20.31■□□□□ 0.84
CTSB-222ENST00000531551 TBC1D8O95759 1140 aa20.31■□□□□ 0.84
CTSB-222ENST00000531551 PDCP20941 246 aa20.31■□□□□ 0.84
CTSB-222ENST00000531551 CCDC148Q8NFR7 591 aa20.31■□□□□ 0.84
CTSB-222ENST00000531551 SHISA4Q96DD7 197 aa20.31■□□□□ 0.84
CTSB-222ENST00000531551 RNF146Q9NTX7 359 aa20.31■□□□□ 0.84
CTSB-222ENST00000531551 RNF186Q9NXI6 227 aa20.31■□□□□ 0.84
CTSB-222ENST00000531551 VPS37CA5D8V6 355 aaPredicted RBP20.3■□□□□ 0.84
CTSB-222ENST00000531551 KRT40Q6A162 431 aa20.3■□□□□ 0.84
CTSB-222ENST00000531551 RIOX2Q8IUF8 465 aa20.3■□□□□ 0.84
CTSB-222ENST00000531551 SH3GLB2Q9NR46 395 aa20.3■□□□□ 0.84
CTSB-222ENST00000531551 CEP350Q5VT06 3117 aa20.3■□□□□ 0.84
CTSB-222ENST00000531551 SYT1P21579 422 aa20.3■□□□□ 0.84
CTSB-222ENST00000531551 CCNA1P78396 465 aa20.3■□□□□ 0.84
CTSB-222ENST00000531551 FAM110CQ1W6H9 321 aa20.3■□□□□ 0.84
CTSB-222ENST00000531551 MUM1L1Q5H9M0 696 aa20.3■□□□□ 0.84
CTSB-222ENST00000531551 R3HDMLQ9H3Y0 253 aa20.3■□□□□ 0.84
CTSB-222ENST00000531551 PARP14Q460N5 1801 aa20.29■□□□□ 0.84
CTSB-222ENST00000531551 ERCC3P19447 782 aa20.29■□□□□ 0.84
CTSB-222ENST00000531551 PPP1R18Q6NYC8 613 aa20.29■□□□□ 0.84
CTSB-222ENST00000531551 C17orf99Q6UX52 265 aa20.29■□□□□ 0.84
CTSB-222ENST00000531551 FBXO18Q8NFZ0 1043 aa20.29■□□□□ 0.84
CTSB-222ENST00000531551 PSTPIP2Q9H939 334 aa20.29■□□□□ 0.84
CTSB-222ENST00000531551 C6orf50Q9HD87 102 aa20.29■□□□□ 0.84
CTSB-222ENST00000531551 MORF4L1Q9UBU8 362 aa20.29■□□□□ 0.84
CTSB-222ENST00000531551 ADGRA2Q96PE1 1338 aa20.29■□□□□ 0.84
CTSB-222ENST00000531551 NFIBO00712 420 aa20.28■□□□□ 0.84
CTSB-222ENST00000531551 SLC25A27O95847 323 aa20.28■□□□□ 0.84
CTSB-222ENST00000531551 CFBP00751 764 aa20.28■□□□□ 0.84
CTSB-222ENST00000531551 PORCNQ9H237 461 aa20.28■□□□□ 0.84
CTSB-222ENST00000531551 ACAD9Q9H845 621 aa20.28■□□□□ 0.84
CTSB-222ENST00000531551 EFCC1Q9HA90 598 aa20.28■□□□□ 0.84
CTSB-222ENST00000531551 BCRP11274 1271 aa20.28■□□□□ 0.84
CTSB-222ENST00000531551 GNA11P29992 359 aa20.28■□□□□ 0.84
CTSB-222ENST00000531551 ADCY7P51828 1080 aa20.28■□□□□ 0.84
CTSB-222ENST00000531551 TKFCQ3LXA3 575 aa20.28■□□□□ 0.84
CTSB-222ENST00000531551 MCTP1Q6DN14 999 aa20.28■□□□□ 0.84
CTSB-222ENST00000531551 NSMFQ6X4W1 530 aa20.28■□□□□ 0.84
CTSB-222ENST00000531551 CLEC4DQ8WXI8 215 aa20.28■□□□□ 0.84
CTSB-222ENST00000531551 CUL5Q93034 780 aa20.28■□□□□ 0.84
CTSB-222ENST00000531551 BEGAINQ9BUH8 593 aa20.28■□□□□ 0.84
CTSB-222ENST00000531551 PHF20Q9BVI0 1012 aa20.28■□□□□ 0.84
CTSB-222ENST00000531551 STX6O43752 255 aa20.27■□□□□ 0.84
CTSB-222ENST00000531551 MAP2K1Q02750 393 aaPredicted RBP20.27■□□□□ 0.84
CTSB-222ENST00000531551 GNL2Q13823 731 aaKnown RBP20.27■□□□□ 0.84
CTSB-222ENST00000531551 SAFBQ15424 915 aaKnown RBP eCLIP20.27■□□□□ 0.84
CTSB-222ENST00000531551 CHST13Q8NET6 341 aa20.27■□□□□ 0.84
CTSB-222ENST00000531551 TBC1D5Q92609 795 aa20.27■□□□□ 0.84
CTSB-222ENST00000531551 ZMYND12Q9H0C1 365 aa20.27■□□□□ 0.84
CTSB-222ENST00000531551 BRMS1Q9HCU9 246 aa20.27■□□□□ 0.84
CTSB-222ENST00000531551 A0A0G2JMZ2 1700 aa20.27■□□□□ 0.83
CTSB-222ENST00000531551 MMP1P03956 469 aa20.26■□□□□ 0.83
CTSB-222ENST00000531551 CALML3P27482 149 aa20.26■□□□□ 0.83
CTSB-222ENST00000531551 MRPL12P52815 198 aaKnown RBP20.26■□□□□ 0.83
CTSB-222ENST00000531551 UBE2SQ16763 222 aa20.26■□□□□ 0.83
CTSB-222ENST00000531551 FOXD4L5Q5VV16 416 aaPredicted RBP20.26■□□□□ 0.83
CTSB-222ENST00000531551 MCF2L2Q86YR7 1114 aa20.26■□□□□ 0.83
CTSB-222ENST00000531551 DNAJC5GQ8N7S2 189 aa20.26■□□□□ 0.83
CTSB-222ENST00000531551 FOXD4L4Q8WXT5 416 aaPredicted RBP20.26■□□□□ 0.83
CTSB-222ENST00000531551 PCDHA4Q9UN74 947 aa20.26■□□□□ 0.83
CTSB-222ENST00000531551 COL11A1P12107 1806 aaPredicted RBP20.26■□□□□ 0.83
CTSB-222ENST00000531551 OPLAHO14841 1288 aa20.26■□□□□ 0.83
CTSB-222ENST00000531551 HOXA13P31271 388 aaPredicted RBP20.26■□□□□ 0.83
CTSB-222ENST00000531551 COPB2P35606 906 aa20.26■□□□□ 0.83
CTSB-222ENST00000531551 USP17L6PQ6QN14 398 aa20.26■□□□□ 0.83
CTSB-222ENST00000531551 DIS3L2Q8IYB7 885 aaKnown RBP20.26■□□□□ 0.83
CTSB-222ENST00000531551 ANKRD35Q8N283 1001 aa20.26■□□□□ 0.83
CTSB-222ENST00000531551 MROH8Q9H579 483 aa20.26■□□□□ 0.83
CTSB-222ENST00000531551 RIC8AQ9NPQ8 531 aa20.26■□□□□ 0.83
CTSB-222ENST00000531551 BIN2Q9UBW5 565 aaPredicted RBP20.26■□□□□ 0.83
CTSB-222ENST00000531551 FBXO40Q9UH90 709 aa20.26■□□□□ 0.83
CTSB-222ENST00000531551 ESYT2A0FGR8 921 aa20.25■□□□□ 0.83
CTSB-222ENST00000531551 GCOM1H8Y6P7 765 aaPredicted RBP20.25■□□□□ 0.83
CTSB-222ENST00000531551 ADAMTS3O15072 1205 aa20.25■□□□□ 0.83
CTSB-222ENST00000531551 POLR2MP0CAP2 368 aa20.25■□□□□ 0.83
CTSB-222ENST00000531551 KRT2P35908 639 aa20.25■□□□□ 0.83
CTSB-222ENST00000531551 PKP1Q13835 747 aa20.25■□□□□ 0.83
CTSB-222ENST00000531551 BLIDQ8IZY5 108 aa20.25■□□□□ 0.83
CTSB-222ENST00000531551 RASGRP4Q8TDF6 673 aa20.25■□□□□ 0.83
CTSB-222ENST00000531551 OXER1Q8TDS5 423 aa20.25■□□□□ 0.83
CTSB-222ENST00000531551 MYH6P13533 1939 aa20.25■□□□□ 0.83
CTSB-222ENST00000531551 RNF207Q6ZRF8 634 aa20.24■□□□□ 0.83
CTSB-222ENST00000531551 SHCBP1Q8NEM2 672 aa20.24■□□□□ 0.83
CTSB-222ENST00000531551 BICD2Q8TD16 824 aa20.24■□□□□ 0.83
CTSB-222ENST00000531551 BTBD18B2RXH4 712 aa20.24■□□□□ 0.83
CTSB-222ENST00000531551 NR5A1Q13285 461 aa20.24■□□□□ 0.83
CTSB-222ENST00000531551 JAKMIP3Q5VZ66 844 aa20.24■□□□□ 0.83
CTSB-222ENST00000531551 GALNT17Q6IS24 598 aa20.24■□□□□ 0.83
CTSB-222ENST00000531551 FERMT3Q86UX7 667 aa20.24■□□□□ 0.83
CTSB-222ENST00000531551 FCHSD1Q86WN1 690 aa20.24■□□□□ 0.83
CTSB-222ENST00000531551 REXO1Q8N1G1 1221 aaKnown RBP20.24■□□□□ 0.83
CTSB-222ENST00000531551 GLT8D2Q9H1C3 349 aa20.24■□□□□ 0.83
CTSB-222ENST00000531551 A1CFQ9NQ94 594 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms