RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 HAUS7Q99871 368 aa6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 PLCD4Q9BRC7 762 aa6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 SLC12A9Q9BXP2 914 aa6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 EPB41L4BQ9H329 900 aa6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 NOL6Q9H6R4 1146 aaKnown RBP6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 ERVK13-1Q9NX77 482 aa6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 SUSD2Q9UGT4 822 aa6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 FHOD1Q9Y613 1164 aa6.94□□□□□ -1.3
HMGB1P1-201ENST00000522557 DIAPH1O60610 1272 aaKnown RBP6.93□□□□□ -1.3
HMGB1P1-201ENST00000522557 KRT1P04264 644 aa6.93□□□□□ -1.3
HMGB1P1-201ENST00000522557 HSP90B1P14625 803 aaKnown RBP6.93□□□□□ -1.3
HMGB1P1-201ENST00000522557 SLC7A5Q01650 507 aa6.93□□□□□ -1.3
HMGB1P1-201ENST00000522557 NCAPHQ15003 741 aa6.93□□□□□ -1.3
HMGB1P1-201ENST00000522557 SLC10A6Q3KNW5 377 aa6.93□□□□□ -1.3
HMGB1P1-201ENST00000522557 CWF19L1Q69YN2 538 aaKnown RBP6.93□□□□□ -1.3
HMGB1P1-201ENST00000522557 SPATC1Q76KD6 591 aa6.93□□□□□ -1.3
HMGB1P1-201ENST00000522557 GPATCH3Q96I76 525 aa6.93□□□□□ -1.3
HMGB1P1-201ENST00000522557 FGD4Q96M96 766 aa6.93□□□□□ -1.3
HMGB1P1-201ENST00000522557 SLC6A17Q9H1V8 727 aa6.93□□□□□ -1.3
HMGB1P1-201ENST00000522557 TNFRSF10DQ9UBN6 386 aa6.93□□□□□ -1.3
HMGB1P1-201ENST00000522557 GPR55Q9Y2T6 319 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P1-201ENST00000522557 R3HCC1Q9Y3T6 440 aaKnown RBP6.93□□□□□ -1.3
HMGB1P1-201ENST00000522557 ANKRD62A6NC57 917 aa6.92□□□□□ -1.3
HMGB1P1-201ENST00000522557 EPHX1P07099 455 aa6.92□□□□□ -1.3
HMGB1P1-201ENST00000522557 ITGA4P13612 1032 aa6.92□□□□□ -1.3
HMGB1P1-201ENST00000522557 SDHBP21912 280 aa6.92□□□□□ -1.3
HMGB1P1-201ENST00000522557 PDE6BP35913 854 aa6.92□□□□□ -1.3
HMGB1P1-201ENST00000522557 PPP2R5DQ14738 602 aa6.92□□□□□ -1.3
HMGB1P1-201ENST00000522557 PKN1Q16512 942 aa6.92□□□□□ -1.3
HMGB1P1-201ENST00000522557 ADCY4Q8NFM4 1077 aa6.92□□□□□ -1.3
HMGB1P1-201ENST00000522557 ZDHHC15Q96MV8 337 aa6.92□□□□□ -1.3
HMGB1P1-201ENST00000522557 FCRL3Q96P31 734 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P1-201ENST00000522557 KLHL25Q9H0H3 589 aa6.92□□□□□ -1.3
HMGB1P1-201ENST00000522557 A0A087WZG4 1122 aa6.91□□□□□ -1.3
HMGB1P1-201ENST00000522557 SUSD5O60279 629 aa6.91□□□□□ -1.3
HMGB1P1-201ENST00000522557 C1QTNF9P0C862 333 aa6.91□□□□□ -1.3
HMGB1P1-201ENST00000522557 HSF5Q4G112 596 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P1-201ENST00000522557 HEATR6Q6AI08 1181 aaKnown RBP6.91□□□□□ -1.3
HMGB1P1-201ENST00000522557 KIAA1211LQ6NV74 962 aa6.91□□□□□ -1.3
HMGB1P1-201ENST00000522557 ZNF605Q86T29 641 aa6.91□□□□□ -1.3
HMGB1P1-201ENST00000522557 IRF2BP1Q8IU81 584 aa6.91□□□□□ -1.3
HMGB1P1-201ENST00000522557 THAP3Q8WTV1 239 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P1-201ENST00000522557 KCNN1Q92952 543 aa6.91□□□□□ -1.3
HMGB1P1-201ENST00000522557 BRINP2Q9C0B6 783 aa6.91□□□□□ -1.3
HMGB1P1-201ENST00000522557 EPN3Q9H201 632 aa6.91□□□□□ -1.3
HMGB1P1-201ENST00000522557 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.91□□□□□ -1.3
HMGB1P1-201ENST00000522557 MYOCOSA0A1B0GUC4 107 aa6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 ESYT3A0FGR9 886 aa6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 DBX1A6NMT0 343 aa6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 VAMP4O75379 141 aa6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 NOP2P46087 812 aaKnown RBP6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 JAG1P78504 1218 aa6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 IFRD2Q12894 506 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 LONRF2Q1L5Z9 754 aa6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 VHLLQ6RSH7 139 aa6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 ADAT2Q7Z6V5 191 aaKnown RBP6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 SLCO6A1Q86UG4 719 aa6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 JMJD8Q96S16 334 aa6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 MCMBPQ9BTE3 642 aa6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 ZNF552Q9H707 407 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 FANCLQ9NW38 375 aa6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 WHRNQ9P202 907 aa6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 DIS3Q9Y2L1 958 aaKnown RBP6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 SF3B6Q9Y3B4 125 aaKnown RBP6.9□□□□□ -1.3
HMGB1P1-201ENST00000522557 WTIPA6NIX2 430 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 CCDC85CA6NKD9 419 aa6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 ETV2O00321 342 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 DDAH1O94760 285 aa6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 CD3EP07766 207 aa6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 TMEM253P0C7T8 217 aa6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 IFNGR1P15260 489 aa6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 ENDOUP21128 410 aaKnown RBP6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 RAP1GAPP47736 663 aa6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 ZNF143P52747 638 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 FZD5Q13467 585 aa6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 MTERF2Q49AM1 385 aa6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 ADGRF1Q5T601 910 aa6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 GALNT18Q6P9A2 607 aa6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 CILP2Q8IUL8 1156 aa6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 BHLHE22Q8NFJ8 381 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 MCOLN1Q9GZU1 580 aa6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 CRTAC1Q9NQ79 661 aa6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 PTCH2Q9Y6C5 1203 aa6.89□□□□□ -1.31
HMGB1P1-201ENST00000522557 A0A1W2PQ45 241 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P1-201ENST00000522557 A0A1W2PQY0 241 aa6.88□□□□□ -1.31
HMGB1P1-201ENST00000522557 NFIBO00712 420 aa6.88□□□□□ -1.31
HMGB1P1-201ENST00000522557 FGF10O15520 208 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P1-201ENST00000522557 CDC45O75419 566 aa6.88□□□□□ -1.31
HMGB1P1-201ENST00000522557 TSPAN15O95858 294 aa6.88□□□□□ -1.31
HMGB1P1-201ENST00000522557 PNLIPP16233 465 aa6.88□□□□□ -1.31
HMGB1P1-201ENST00000522557 PRKCAP17252 672 aa6.88□□□□□ -1.31
HMGB1P1-201ENST00000522557 NCLP19338 710 aaKnown RBP6.88□□□□□ -1.31
HMGB1P1-201ENST00000522557 POU4F1Q01851 419 aa6.88□□□□□ -1.31
HMGB1P1-201ENST00000522557 TKFCQ3LXA3 575 aa6.88□□□□□ -1.31
HMGB1P1-201ENST00000522557 EEPD1Q7L9B9 569 aa6.88□□□□□ -1.31
HMGB1P1-201ENST00000522557 NAT16Q8N8M0 369 aa6.88□□□□□ -1.31
HMGB1P1-201ENST00000522557 SLC26A8Q96RN1 970 aa6.88□□□□□ -1.31
HMGB1P1-201ENST00000522557 PPP1R16BQ96T49 567 aa6.88□□□□□ -1.31
HMGB1P1-201ENST00000522557 GBP3Q9H0R5 595 aa6.88□□□□□ -1.31
HMGB1P1-201ENST00000522557 TAF6LQ9Y6J9 622 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms