RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 NAP1L2Q9ULW6 460 aaPredicted RBP7.35□□□□□ -1.23
IGHV4-55-201ENST00000520889 DIS3Q9Y2L1 958 aaKnown RBP7.35□□□□□ -1.23
IGHV4-55-201ENST00000520889 V9GY48 417 aaPredicted RBP7.35□□□□□ -1.23
IGHV4-55-201ENST00000520889 PFASO15067 1338 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 SLC15A5A6NIM6 579 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 CD2BP2O95400 341 aaKnown RBP7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 LARGE1O95461 756 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 CTDNEP1O95476 244 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 TBC1D8O95759 1140 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 HOXC6P09630 235 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 ERCC3P19447 782 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 PTPREP23469 700 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 GNA11P29992 359 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 CTCFP49711 727 aaPredicted RBP7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 ST3GAL1Q11201 340 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 STK3Q13188 491 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 IRF5Q13568 498 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 GRB14Q14449 540 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 PKN1Q16512 942 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 PLEKHH3Q7Z736 793 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 ZNF467Q7Z7K2 595 aaPredicted RBP7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 CCAR1Q8IX12 1150 aaKnown RBP7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 CPXCR1Q8N123 301 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 MSL3Q8N5Y2 521 aaKnown RBP7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 SOCS4Q8WXH5 440 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 COA7Q96BR5 231 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 TRERF1Q96PN7 1200 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 PAGR1Q9BTK6 254 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 SLC26A6Q9BXS9 759 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 ZMYND12Q9H0C1 365 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 NCOA5Q9HCD5 579 aaKnown RBP7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 RAVER2Q9HCJ3 691 aaKnown RBP7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 VAT1LQ9HCJ6 419 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 RNF146Q9NTX7 359 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 SLC5A4Q9NY91 659 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 CPA4Q9UI42 421 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 PCDHA1Q9Y5I3 950 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 IVNS1ABPQ9Y6Y0 642 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 LCTP09848 1927 aa7.34□□□□□ -1.23
IGHV4-55-201ENST00000520889 PTPDC1A2A3K4 754 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 B4DLN1 442 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 PPP1R11O60927 126 aaPredicted RBP7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 FOSP01100 380 aaPredicted RBP7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 FCER1AP12319 257 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 XRCC5P13010 732 aaKnown RBP7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 ALAS1P13196 640 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 FDPSP14324 419 aaKnown RBP7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 PDCP20941 246 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 CALML3P27482 149 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 HSD17B4P51659 736 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 MRPL12P52815 198 aaKnown RBP7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 PLS1Q14651 629 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 KCTD2Q14681 263 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 MORN1Q5T089 497 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 CCDC174Q6PII3 467 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 GPR142Q7Z601 462 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 NCAPG2Q86XI2 1143 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 HOMER1Q86YM7 354 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 RAB11FIP4Q86YS3 637 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 CCDC83Q8IWF9 413 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 TRMT44Q8IYL2 757 aaKnown RBP7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 CMTR1Q8N1G2 835 aaKnown RBP7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 NECAB1Q8N987 351 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 DAGLBQ8NCG7 672 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 DNERQ8NFT8 737 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 BICD2Q8TD16 824 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 ZNF296Q8WUU4 475 aaPredicted RBP7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 CLEC4DQ8WXI8 215 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 USP6NLQ92738 828 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 AGBL1Q96MI9 1066 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 NUDT12Q9BQG2 462 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 LARP6Q9BRS8 491 aaKnown RBP7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 PORCNQ9H237 461 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 CPVLQ9H3G5 476 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 R3HDMLQ9H3Y0 253 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 RIC8AQ9NPQ8 531 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 PRDM10Q9NQV6 1147 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 ORC3Q9UBD5 711 aaPredicted RBP7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 RIPK3Q9Y572 518 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 KIAA1217Q5T5P2 1943 aa7.33□□□□□ -1.24
IGHV4-55-201ENST00000520889 FRMPD4Q14CM0 1322 aa7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 DNAJC25-GNG10A0A024R161 153 aa7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 GCOM1H8Y6P7 765 aaPredicted RBP7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 STXBP3O00186 592 aa7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 TNPO2O14787 897 aaKnown RBP7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 OPLAHO14841 1288 aa7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 POLR2MP0CAP2 368 aa7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 HSPA1AP0DMV8 641 aaKnown RBP7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 HSPA1BP0DMV9 641 aaKnown RBP7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 HSPA8P11142 646 aaKnown RBP7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 RGS2P41220 211 aa7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 PSMC4P43686 418 aa7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 AP3B2Q13367 1082 aa7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 PKN2Q16513 984 aaKnown RBP7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 WWC2Q6AWC2 1192 aa7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 RNF207Q6ZRF8 634 aa7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 NOL8Q76FK4 1167 aaKnown RBP7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 CCDC82Q8N4S0 544 aa7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 FAM133AQ8N9E0 248 aa7.32□□□□□ -1.24
IGHV4-55-201ENST00000520889 PXYLP1Q8TE99 480 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms