RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-223ENST00000520828 RFC2P35250 354 aa9.69□□□□□ -0.86
PTK2-223ENST00000520828 PSMC6P62333 389 aa9.69□□□□□ -0.86
PTK2-223ENST00000520828 ATP8B2P98198 1209 aa9.69□□□□□ -0.86
PTK2-223ENST00000520828 NHLH1Q02575 133 aa9.69□□□□□ -0.86
PTK2-223ENST00000520828 C12orf60Q5U649 245 aa9.69□□□□□ -0.86
PTK2-223ENST00000520828 C16orf86Q6ZW13 317 aa9.69□□□□□ -0.86
PTK2-223ENST00000520828 HERC6Q8IVU3 1022 aa9.69□□□□□ -0.86
PTK2-223ENST00000520828 CHST13Q8NET6 341 aa9.69□□□□□ -0.86
PTK2-223ENST00000520828 DDRGK1Q96HY6 314 aa9.69□□□□□ -0.86
PTK2-223ENST00000520828 ALDH8A1Q9H2A2 487 aaPredicted RBP9.69□□□□□ -0.86
PTK2-223ENST00000520828 ARMT1Q9H993 441 aa9.69□□□□□ -0.86
PTK2-223ENST00000520828 RAVER2Q9HCJ3 691 aaKnown RBP9.69□□□□□ -0.86
PTK2-223ENST00000520828 ATP8A2Q9NTI2 1148 aa9.69□□□□□ -0.86
PTK2-223ENST00000520828 GNEQ9Y223 722 aaKnown RBP9.69□□□□□ -0.86
PTK2-223ENST00000520828 NOP58Q9Y2X3 529 aaKnown RBP9.69□□□□□ -0.86
PTK2-223ENST00000520828 PRRC2BQ5JSZ5 2229 aaKnown RBP9.68□□□□□ -0.86
PTK2-223ENST00000520828 CYP2D7A0A087X1C5 515 aa9.68□□□□□ -0.86
PTK2-223ENST00000520828 ASB14A6NK59 587 aa9.68□□□□□ -0.86
PTK2-223ENST00000520828 F5H6K3 240 aa9.68□□□□□ -0.86
PTK2-223ENST00000520828 CYP2C9P11712 490 aa9.68□□□□□ -0.86
PTK2-223ENST00000520828 KLRC3Q07444 240 aa9.68□□□□□ -0.86
PTK2-223ENST00000520828 AACSQ86V21 672 aa9.68□□□□□ -0.86
PTK2-223ENST00000520828 FRAT1Q92837 279 aaPredicted RBP9.68□□□□□ -0.86
PTK2-223ENST00000520828 KIFC2Q96AC6 838 aa9.68□□□□□ -0.86
PTK2-223ENST00000520828 CLUAP1Q96AJ1 413 aa9.68□□□□□ -0.86
PTK2-223ENST00000520828 KCNH6Q9H252 994 aa9.68□□□□□ -0.86
PTK2-223ENST00000520828 SLC38A10Q9HBR0 1119 aa9.68□□□□□ -0.86
PTK2-223ENST00000520828 TRMT13Q9NUP7 481 aaKnown RBP9.68□□□□□ -0.86
PTK2-223ENST00000520828 LMCD1Q9NZU5 365 aa9.68□□□□□ -0.86
PTK2-223ENST00000520828 TNKSO95271 1327 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 TCRBV5S4A2TA0A5A2 114 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 USP17L12C9JPN9 530 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 USP17L21D6R901 530 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 GOLIM4O00461 696 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 PRKAB2O43741 272 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 LPXNO60711 386 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 ARHGEF15O94989 841 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 MBD4O95243 580 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 NDUFB10O96000 172 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 SMPD1P17405 629 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 KCNJ6P48051 423 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 OAZ1P54368 228 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 CNTN2Q02246 1040 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 FAM178BQ8IXR5 827 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 FAM133AQ8N9E0 248 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 RETREG2Q8NC44 543 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 FTOQ9C0B1 505 aaKnown RBP eCLIP9.67□□□□□ -0.86
PTK2-223ENST00000520828 UBE2ZQ9H832 354 aaPredicted RBP9.67□□□□□ -0.86
PTK2-223ENST00000520828 HOMER2Q9NSB8 354 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 TNNQ9UQP3 1299 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 Q9Y3F1 56 aa9.67□□□□□ -0.86
PTK2-223ENST00000520828 ZNF536O15090 1300 aa9.66□□□□□ -0.86
PTK2-223ENST00000520828 BAIAP3O94812 1187 aa9.66□□□□□ -0.86
PTK2-223ENST00000520828 LEXMQ3ZCV2 418 aa9.66□□□□□ -0.86
PTK2-223ENST00000520828 IQSEC1Q6DN90 963 aa9.66□□□□□ -0.86
PTK2-223ENST00000520828 ERC1Q8IUD2 1116 aa9.66□□□□□ -0.86
PTK2-223ENST00000520828 TMEM57Q8N5G2 664 aa9.66□□□□□ -0.86
PTK2-223ENST00000520828 GDPD5Q8WTR4 605 aa9.66□□□□□ -0.86
PTK2-223ENST00000520828 MS4A3Q96HJ5 214 aa9.66□□□□□ -0.86
PTK2-223ENST00000520828 FBXL18Q96ME1 805 aa9.66□□□□□ -0.86
PTK2-223ENST00000520828 DNAJC2Q99543 621 aaKnown RBP9.66□□□□□ -0.86
PTK2-223ENST00000520828 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.66□□□□□ -0.86
PTK2-223ENST00000520828 C1orf115Q9H7X2 142 aa9.66□□□□□ -0.86
PTK2-223ENST00000520828 ACAD9Q9H845 621 aa9.66□□□□□ -0.86
PTK2-223ENST00000520828 POLR3EQ9NVU0 708 aa9.66□□□□□ -0.86
PTK2-223ENST00000520828 NYAP2Q9P242 653 aa9.66□□□□□ -0.86
PTK2-223ENST00000520828 FEM1BQ9UK73 627 aa9.66□□□□□ -0.86
PTK2-223ENST00000520828 COG6Q9Y2V7 657 aa9.66□□□□□ -0.86
PTK2-223ENST00000520828 MYH8P13535 1937 aa9.66□□□□□ -0.86
PTK2-223ENST00000520828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.65□□□□□ -0.86
PTK2-223ENST00000520828 SOWAHBA6NEL2 793 aa9.65□□□□□ -0.86
PTK2-223ENST00000520828 DCXO43602 365 aa9.65□□□□□ -0.86
PTK2-223ENST00000520828 KCNA5P22460 613 aa9.65□□□□□ -0.86
PTK2-223ENST00000520828 PTGS1P23219 599 aa9.65□□□□□ -0.86
PTK2-223ENST00000520828 HNRNPUQ00839 825 aaKnown RBP eCLIP9.65□□□□□ -0.86
PTK2-223ENST00000520828 PUS10Q3MIT2 529 aaKnown RBP9.65□□□□□ -0.86
PTK2-223ENST00000520828 FAM47CQ5HY64 1035 aa9.65□□□□□ -0.86
PTK2-223ENST00000520828 PTCRAQ6ISU1 281 aaPredicted RBP9.65□□□□□ -0.86
PTK2-223ENST00000520828 FBXO16Q8IX29 292 aaPredicted RBP9.65□□□□□ -0.86
PTK2-223ENST00000520828 ZBED2Q9BTP6 218 aa9.65□□□□□ -0.86
PTK2-223ENST00000520828 PDGFCQ9NRA1 345 aa9.65□□□□□ -0.86
PTK2-223ENST00000520828 LCHNA4D1U4 455 aa9.64□□□□□ -0.87
PTK2-223ENST00000520828 MYL3P08590 195 aa9.64□□□□□ -0.87
PTK2-223ENST00000520828 IQCF3P0C7M6 154 aa9.64□□□□□ -0.87
PTK2-223ENST00000520828 FDX1P10109 184 aa9.64□□□□□ -0.87
PTK2-223ENST00000520828 IL9P15248 144 aa9.64□□□□□ -0.87
PTK2-223ENST00000520828 CPT1AP50416 773 aa9.64□□□□□ -0.87
PTK2-223ENST00000520828 BFSP2Q13515 415 aa9.64□□□□□ -0.87
PTK2-223ENST00000520828 TAPT1Q6NXT6 567 aa9.64□□□□□ -0.87
PTK2-223ENST00000520828 CTR9Q6PD62 1173 aa9.64□□□□□ -0.87
PTK2-223ENST00000520828 KIAA1211Q6ZU35 1233 aa9.64□□□□□ -0.87
PTK2-223ENST00000520828 EEPD1Q7L9B9 569 aa9.64□□□□□ -0.87
PTK2-223ENST00000520828 SPRED2Q7Z698 418 aa9.64□□□□□ -0.87
PTK2-223ENST00000520828 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.64□□□□□ -0.87
PTK2-223ENST00000520828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.64□□□□□ -0.87
PTK2-223ENST00000520828 MTG1Q9BT17 334 aaPredicted RBP9.64□□□□□ -0.87
PTK2-223ENST00000520828 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.64□□□□□ -0.872e-21■■□□□ 12.2
PTK2-223ENST00000520828 MKNK2Q9HBH9 465 aa9.64□□□□□ -0.87
PTK2-223ENST00000520828 VTA1Q9NP79 307 aa9.64□□□□□ -0.87
PTK2-223ENST00000520828 A1CFQ9NQ94 594 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms