RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 BCL11AQ9H165 835 aa5.99□□□□□ -1.45
SDCBP-207ENST00000520168 EHD4Q9H223 541 aa5.99□□□□□ -1.45
SDCBP-207ENST00000520168 NKX2-4Q9H2Z4 354 aa5.99□□□□□ -1.45
SDCBP-207ENST00000520168 DNAJC18Q9H819 358 aa5.99□□□□□ -1.45
SDCBP-207ENST00000520168 PRKRIP1Q9H875 184 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-207ENST00000520168 SENP2Q9HC62 589 aa5.99□□□□□ -1.45
SDCBP-207ENST00000520168 ATP13A2Q9NQ11 1180 aa5.99□□□□□ -1.45
SDCBP-207ENST00000520168 C11orf16Q9NQ32 467 aa5.99□□□□□ -1.45
SDCBP-207ENST00000520168 BTBD7Q9P203 1132 aa5.99□□□□□ -1.45
SDCBP-207ENST00000520168 NDUFB9Q9Y6M9 179 aa5.99□□□□□ -1.45
SDCBP-207ENST00000520168 PRRC2BQ5JSZ5 2229 aaKnown RBP5.99□□□□□ -1.45
SDCBP-207ENST00000520168 SIP14410 1827 aa5.99□□□□□ -1.45
SDCBP-207ENST00000520168 A0A0U1RQG5 324 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-207ENST00000520168 GRXCR1A8MXD5 290 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 COBLO75128 1261 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 ADAMTS4O75173 837 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 PGK1P00558 417 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 GH2P01242 217 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 FGBP02675 491 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 PFKMP08237 780 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 CSF2RAP15509 400 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 ERCC3P19447 782 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 DIEXFQ68CQ4 756 aaKnown RBP5.98□□□□□ -1.45
SDCBP-207ENST00000520168 C16orf59Q7L2K0 433 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 RPUSD2Q8IZ73 545 aaKnown RBP5.98□□□□□ -1.45
SDCBP-207ENST00000520168 SPATA5Q8NB90 893 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 ZNF384Q8TF68 577 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 TINF2Q9BSI4 451 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 REPIN1Q9BWE0 567 aaKnown RBP5.98□□□□□ -1.45
SDCBP-207ENST00000520168 USP44Q9H0E7 712 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 SIL1Q9H173 461 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 RPAP3Q9H6T3 665 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-207ENST00000520168 SPC25Q9HBM1 224 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 CABP5Q9NP86 173 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 COPRSQ9NQ92 184 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 RAI14Q9P0K7 980 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 SERPINB13Q9UIV8 391 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 CNPY2Q9Y2B0 182 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 MTCH2Q9Y6C9 303 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 MCM3APO60318 1980 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 SYNRGQ9UMZ2 1314 aa5.98□□□□□ -1.45
SDCBP-207ENST00000520168 A0A1B0GUL7 405 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 ARVCFO00192 962 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 DUSP11O75319 330 aaKnown RBP5.97□□□□□ -1.45
SDCBP-207ENST00000520168 ARID4AP29374 1257 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-207ENST00000520168 CDK7P50613 346 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 RAB3GAP1Q15042 981 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 ZYXQ15942 572 aaKnown RBP5.97□□□□□ -1.45
SDCBP-207ENST00000520168 ABCB5Q2M3G0 1257 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 CERKLQ49MI3 558 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-207ENST00000520168 PRAMEF19Q5SWL8 479 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 NAA16Q6N069 864 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-207ENST00000520168 TMED8Q6PL24 325 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-207ENST00000520168 NCAPG2Q86XI2 1143 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 FAM126BQ8IXS8 530 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 KLHDC9Q8NEP7 349 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 SH3RF3Q8TEJ3 882 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-207ENST00000520168 TGFBRAP1Q8WUH2 860 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 XAGE2Q96GT9 111 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 MRGPRX2Q96LB1 330 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 TANGO6Q9C0B7 1094 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 SH2D4AQ9H788 454 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 AATFQ9NY61 560 aaKnown RBP eCLIP5.97□□□□□ -1.45
SDCBP-207ENST00000520168 LMCD1Q9NZU5 365 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 LRP2BPQ9P2M1 347 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 FAM184BQ9ULE4 1060 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 YBX2Q9Y2T7 364 aaKnown RBP5.97□□□□□ -1.45
SDCBP-207ENST00000520168 SLC4A7Q9Y6M7 1214 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 ZNF318Q5VUA4 2279 aa5.97□□□□□ -1.45
SDCBP-207ENST00000520168 CACNA1AO00555 2505 aa5.96□□□□□ -1.45
SDCBP-207ENST00000520168 DCHS1Q96JQ0 3298 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 FAM86C2PA6NEL3 165 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 CABYRO75952 493 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 UQCRFS1P1P0C7P4 283 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 UBTFL1P0CB47 393 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-207ENST00000520168 ZNF865P0CJ78 1059 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-207ENST00000520168 ACRP10323 421 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 ATP2A2P16615 1042 aaKnown RBP5.96□□□□□ -1.46
SDCBP-207ENST00000520168 ADORA1P30542 326 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 JAG1P78504 1218 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 PLS1Q14651 629 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 KCTD2Q14681 263 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 KCNA10Q16322 511 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 TMEM67Q5HYA8 995 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 GORABQ5T7V8 394 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 CCSAPQ6IQ19 270 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-207ENST00000520168 TTC6Q86TZ1 520 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 MAPKAPK5Q8IW41 473 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 KIFC2Q96AC6 838 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 SLC9A7Q96T83 725 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 MMP19Q99542 508 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 PRRX2Q99811 253 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 USB1Q9BQ65 265 aaKnown RBP5.96□□□□□ -1.46
SDCBP-207ENST00000520168 HIPK3Q9H422 1215 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 HMG20BQ9P0W2 317 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 PALD1Q9ULE6 856 aa5.96□□□□□ -1.46
SDCBP-207ENST00000520168 PTPRSQ13332 1948 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 DMDP11532 3685 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 KIF28PB7ZC32 967 aa5.95□□□□□ -1.46
SDCBP-207ENST00000520168 J3QL48 77 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms