RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 FAM71BQ8TC56 605 aa7.47□□□□□ -1.21
CDH12-203ENST00000517378 ERGIC2Q96RQ1 377 aa7.47□□□□□ -1.21
CDH12-203ENST00000517378 EIF3CQ99613 913 aaKnown RBP7.47□□□□□ -1.21
CDH12-203ENST00000517378 TRIM9Q9C026 710 aa7.47□□□□□ -1.21
CDH12-203ENST00000517378 MED4Q9NPJ6 270 aa7.47□□□□□ -1.21
CDH12-203ENST00000517378 MAGEC2Q9UBF1 373 aaPredicted RBP7.47□□□□□ -1.21
CDH12-203ENST00000517378 C10orf71Q711Q0 1435 aa7.47□□□□□ -1.21
CDH12-203ENST00000517378 TAF1LQ8IZX4 1826 aa7.47□□□□□ -1.21
CDH12-203ENST00000517378 ABCB11O95342 1321 aa7.47□□□□□ -1.21
CDH12-203ENST00000517378 PP2D1A8MPX8 630 aa7.46□□□□□ -1.21
CDH12-203ENST00000517378 TFRCP02786 760 aaKnown RBP7.46□□□□□ -1.21
CDH12-203ENST00000517378 USP17L8P0C7I0 530 aa7.46□□□□□ -1.21
CDH12-203ENST00000517378 UBA7P41226 1012 aa7.46□□□□□ -1.21
CDH12-203ENST00000517378 CKAP4Q07065 602 aaKnown RBP7.46□□□□□ -1.21
CDH12-203ENST00000517378 INF2Q27J81 1249 aa7.46□□□□□ -1.21
CDH12-203ENST00000517378 MIIPQ5JXC2 388 aa7.46□□□□□ -1.21
CDH12-203ENST00000517378 ZNF572Q7Z3I7 529 aaPredicted RBP7.46□□□□□ -1.21
CDH12-203ENST00000517378 CERS3Q8IU89 383 aa7.46□□□□□ -1.21
CDH12-203ENST00000517378 GOLGA5Q8TBA6 731 aa7.46□□□□□ -1.21
CDH12-203ENST00000517378 RASGRP4Q8TDF6 673 aa7.46□□□□□ -1.21
CDH12-203ENST00000517378 RUBCNQ92622 972 aa7.46□□□□□ -1.21
CDH12-203ENST00000517378 P2RX5Q93086 422 aa7.46□□□□□ -1.21
CDH12-203ENST00000517378 TRIM47Q96LD4 638 aa7.46□□□□□ -1.21
CDH12-203ENST00000517378 TUBGCP2Q9BSJ2 902 aa7.46□□□□□ -1.21
CDH12-203ENST00000517378 PDE11AQ9HCR9 933 aa7.46□□□□□ -1.21
CDH12-203ENST00000517378 TRIM10Q9UDY6 481 aa7.46□□□□□ -1.21
CDH12-203ENST00000517378 MAPK8IP1Q9UQF2 711 aa7.46□□□□□ -1.21
CDH12-203ENST00000517378 KRT86O43790 486 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 OR52Z1P0C646 297 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 PLCG1P19174 1290 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 TM4SF1P30408 202 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 CYLC1P35663 651 aaPredicted RBP7.46□□□□□ -1.22
CDH12-203ENST00000517378 NOVP48745 357 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 SLC20A2Q08357 652 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 RC3H1Q5TC82 1133 aaKnown RBP7.46□□□□□ -1.22
CDH12-203ENST00000517378 NCAPH2Q6IBW4 605 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 FOXR2Q6PJQ5 311 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 C15orf52Q6ZUT6 534 aaKnown RBP7.46□□□□□ -1.22
CDH12-203ENST00000517378 KRT25Q7Z3Z0 450 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 DZIP1Q86YF9 867 aaKnown RBP7.46□□□□□ -1.22
CDH12-203ENST00000517378 NARFQ9UHQ1 456 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 GUCA1BQ9UMX6 200 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 SAR1BQ9Y6B6 198 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 BTAF1O14981 1849 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 ATAD5Q96QE3 1844 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 ESYT2A0FGR8 921 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 B4DLN1 442 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 ATP1A1P05023 1023 aaKnown RBP7.46□□□□□ -1.22
CDH12-203ENST00000517378 RHOXF2BP0C7M4 288 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 GSTO1P78417 241 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 ITIH3Q06033 890 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 MCM6Q14566 821 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 CCDC122Q5T0U0 273 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 CNNM4Q6P4Q7 775 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 CABP7Q86V35 215 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 CSGALNACT2Q8N6G5 542 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 WDR66Q8TBY9 1149 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 NLRP3Q96P20 1036 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 RHOXF2Q9BQY4 288 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 TSGA10Q9BZW7 698 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 ACBD3Q9H3P7 528 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 TFCP2L1Q9NZI6 479 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 LY75O60449 1722 aa7.46□□□□□ -1.22
CDH12-203ENST00000517378 hCG_1984214I3L0E3 225 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 LCA5LO95447 670 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 RASA1P20936 1047 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 ZSCAN26Q16670 478 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 TSR1Q2NL82 804 aaKnown RBP7.45□□□□□ -1.22
CDH12-203ENST00000517378 MAP9Q49MG5 647 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 ANKRD40Q6AI12 368 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 TXNRD3Q86VQ6 643 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 FNBP4Q8N3X1 1017 aaPredicted RBP7.45□□□□□ -1.22
CDH12-203ENST00000517378 ZNF713Q8N859 430 aaPredicted RBP7.45□□□□□ -1.22
CDH12-203ENST00000517378 SH3RF3Q8TEJ3 882 aaPredicted RBP7.45□□□□□ -1.22
CDH12-203ENST00000517378 CCDC47Q96A33 483 aaKnown RBP7.45□□□□□ -1.22
CDH12-203ENST00000517378 JAKMIP2Q96AA8 810 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 CNOT6LQ96LI5 555 aaKnown RBP7.45□□□□□ -1.22
CDH12-203ENST00000517378 TMEM47Q9BQJ4 181 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 NHEJ1Q9H9Q4 299 aaPredicted RBP7.45□□□□□ -1.22
CDH12-203ENST00000517378 PLIN4Q96Q06 1357 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 ZC3H4Q9UPT8 1303 aaKnown RBP7.45□□□□□ -1.22
CDH12-203ENST00000517378 LRRIQ3A6PVS8 624 aaPredicted RBP7.45□□□□□ -1.22
CDH12-203ENST00000517378 LDHBP07195 334 aaKnown RBP7.45□□□□□ -1.22
CDH12-203ENST00000517378 TSPY3P0CV98 308 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 TSPY8P0CW00 308 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 ACTN2P35609 894 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 VAV2P52735 878 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 RAD51AP2Q09MP3 1159 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 NONOQ15233 471 aaKnown RBP eCLIP7.45□□□□□ -1.22
CDH12-203ENST00000517378 TXNRD1Q16881 649 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 CENPPQ6IPU0 288 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 HEATR3Q7Z4Q2 680 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 AMOTL1Q8IY63 956 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 DYNLL2Q96FJ2 89 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 MMS19Q96T76 1030 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 TSPYL1Q9H0U9 437 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 SUGCTQ9HAC7 445 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 AGPAT5Q9NUQ2 364 aa7.45□□□□□ -1.22
CDH12-203ENST00000517378 USP17L3A6NCW0 530 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 USP17L4A6NCW7 530 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms