RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 CACNA2D3Q8IZS8 1091 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 BEGAINQ9BUH8 593 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 PCDHB13Q9Y5F0 798 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 GOLGA8HP0CJ92 632 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 COPB1P53618 953 aaKnown RBP17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 HHATQ5VTY9 493 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 DCUN1D2Q6PH85 259 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 U2AF1L4Q8WU68 220 aaKnown RBP17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 ARMCX3Q9UH62 379 aaPredicted RBP17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 CDC23Q9UJX2 597 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 DIP2CQ9Y2E4 1556 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 CTNNA1P35221 906 aaKnown RBP17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 MIER3Q7Z3K6 550 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 SLC8A3P57103 927 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 TPH2Q8IWU9 490 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 PUS7LQ9H0K6 701 aaKnown RBP17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 MYO1AQ9UBC5 1043 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 LAD1O00515 517 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 ARHGAP44Q17R89 818 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 DPY19L2Q6NUT2 758 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 GPKOWQ92917 476 aaPredicted RBP eCLIP17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 CDHR2Q9BYE9 1310 aa17.77■□□□□ 0.44
HMGXB3-202ENST00000503427 GBP1P32455 592 aa17.77■□□□□ 0.44
HMGXB3-202ENST00000503427 DYNLL1P63167 89 aaKnown RBP17.77■□□□□ 0.44
HMGXB3-202ENST00000503427 LCORLQ8N3X6 602 aa17.77■□□□□ 0.44
HMGXB3-202ENST00000503427 FAM71BQ8TC56 605 aa17.77■□□□□ 0.44
HMGXB3-202ENST00000503427 PPRC1Q5VV67 1664 aaKnown RBP17.77■□□□□ 0.44
HMGXB3-202ENST00000503427 KCNK3O14649 394 aa17.77■□□□□ 0.44
HMGXB3-202ENST00000503427 DPCR1Q3MIW9 517 aa17.77■□□□□ 0.44
HMGXB3-202ENST00000503427 LMNTD2Q8IXW0 634 aa17.77■□□□□ 0.44
HMGXB3-202ENST00000503427 PI16Q6UXB8 463 aa17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 KRT26Q7Z3Y9 468 aa17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 SRGAP1Q7Z6B7 1085 aa17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 MRRFQ96E11 262 aaKnown RBP17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 INO80Q9ULG1 1556 aaPredicted RBP17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 hCG_1984214I3L0E3 225 aa17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 TTLL1O95922 423 aa17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 GNGT1P63211 74 aa17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 RASGRF1Q13972 1273 aa17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 PRR16Q569H4 304 aa17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 CEP85LQ5SZL2 805 aa17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 C11orf57Q6ZUT1 292 aaPredicted RBP17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 ZNF713Q8N859 430 aaPredicted RBP17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 LINC00301Q8NCQ3 95 aa17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 AMNQ9BXJ7 453 aa17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 DHX36Q9H2U1 1008 aaKnown RBP17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 CUEDC2Q9H467 287 aa17.77■□□□□ 0.43
HMGXB3-202ENST00000503427 NPR1P16066 1061 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 KCNQ4P56696 695 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 LGSNQ5TDP6 509 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 CACTINQ8WUQ7 758 aaKnown RBP17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 SERPINB13Q9UIV8 391 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 PCDHA1Q9Y5I3 950 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 OVOS2A0A0G2JMS6 1433 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 OVOS2A0A0J9YW53 1432 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 OVOS2Q6IE36 1432 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 RGS16O15492 202 aaPredicted RBP17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 ALAS1P13196 640 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 GUCY2FP51841 1108 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 PPP1R21Q6ZMI0 780 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 PNMA8AQ86V59 439 aaPredicted RBP17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 SRP68Q9UHB9 627 aaKnown RBP17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 NARFQ9UHQ1 456 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 FAM184BQ9ULE4 1060 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 USTQ9Y2C2 406 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 ARHGEF40Q8TER5 1519 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 LRRC7Q96NW7 1537 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 TMEM232C9JQI7 657 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 KRIT1O00522 736 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 BUB1BO60566 1050 aaPredicted RBP17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 PABPC4Q13310 644 aaKnown RBP eCLIP17.76■□□□□ 0.433e-9■■□□□ 11.7
HMGXB3-202ENST00000503427 NECTIN1Q15223 517 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 SPATS2Q86XZ4 545 aaKnown RBP17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 METTL14Q9HCE5 456 aaKnown RBP17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 PCK1P35558 622 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 LIFRP42702 1097 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 HLFQ16534 295 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 GOLGA5Q8TBA6 731 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 KANSL2Q9H9L4 492 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 PANK4Q9NVE7 773 aa17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 DDX25Q9UHL0 483 aaKnown RBP17.76■□□□□ 0.43
HMGXB3-202ENST00000503427 KRT15P19012 456 aa17.75■□□□□ 0.43
HMGXB3-202ENST00000503427 CASP14P31944 242 aa17.75■□□□□ 0.43
HMGXB3-202ENST00000503427 KIF23Q02241 960 aaPredicted RBP17.75■□□□□ 0.43
HMGXB3-202ENST00000503427 SMCR8Q8TEV9 937 aaPredicted RBP17.75■□□□□ 0.43
HMGXB3-202ENST00000503427 SH2B2O14492 632 aaPredicted RBP17.75■□□□□ 0.43
HMGXB3-202ENST00000503427 AFF2P51816 1311 aa17.75■□□□□ 0.43
HMGXB3-202ENST00000503427 ARHGAP24Q8N264 748 aa17.75■□□□□ 0.43
HMGXB3-202ENST00000503427 UIMC1Q96RL1 719 aa17.75■□□□□ 0.43
HMGXB3-202ENST00000503427 PHLPP2Q6ZVD8 1323 aa17.75■□□□□ 0.43
HMGXB3-202ENST00000503427 IFNAR1P17181 557 aa17.75■□□□□ 0.43
HMGXB3-202ENST00000503427 APBA1Q02410 837 aa17.75■□□□□ 0.43
HMGXB3-202ENST00000503427 ITIH3Q06033 890 aa17.75■□□□□ 0.43
HMGXB3-202ENST00000503427 ARHGEF16Q5VV41 709 aa17.75■□□□□ 0.43
HMGXB3-202ENST00000503427 MCUR1Q96AQ8 359 aa17.75■□□□□ 0.43
HMGXB3-202ENST00000503427 STK10O94804 968 aaKnown RBP17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 ADRA2BP18089 450 aa17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 CCDC62Q6P9F0 684 aa17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 CSRNP1Q96S65 589 aa17.74■□□□□ 0.43
HMGXB3-202ENST00000503427 RNF40O75150 1001 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms