RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	USP17L11	C9JVI0	530 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	USP17L18	D6R9N7	530 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	USP17L22	D6RA61	530 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	USP17L17	D6RBQ6	530 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	USP17L19	D6RCP7	530 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	USP17L20	D6RJB6	530 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	FDX1	P10109	184 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	CALML3	P27482	149 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	KRT2	P35908	639 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	NAPA	P54920	295 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	NLRP5	P59047	1200 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	SNAP25	P60880	206 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	USP17L24	Q0WX57	530 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	IK	Q13123	557 aa	Predicted RBP	13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	NR5A1	Q13285	461 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	TREML2	Q5T2D2	321 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	FAM173B	Q6P4H8	233 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	SMC1B	Q8NDV3	1235 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	KIFC2	Q96AC6	838 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	AMN	Q9BXJ7	453 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	SLC38A10	Q9HBR0	1119 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	PCDHA4	Q9UN74	947 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	ATP6V1D	Q9Y5K8	247 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	PPP1R37	O75864	691 aa		13.96	□□□□□ -0.17
MATR3-231	ENST00000502394	FLOT1	O75955	427 aa		13.96	□□□□□ -0.17
MATR3-231	ENST00000502394	SAFB	Q15424	915 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
MATR3-231	ENST00000502394	MYSM1	Q5VVJ2	828 aa		13.96	□□□□□ -0.17
MATR3-231	ENST00000502394	MCTP1	Q6DN14	999 aa		13.96	□□□□□ -0.17
MATR3-231	ENST00000502394	GPAT2	Q6NUI2	795 aa		13.96	□□□□□ -0.17
MATR3-231	ENST00000502394	FBXO11	Q86XK2	927 aa		13.96	□□□□□ -0.17
MATR3-231	ENST00000502394	NOSTRIN	Q8IVI9	506 aa		13.96	□□□□□ -0.17
MATR3-231	ENST00000502394	BLID	Q8IZY5	108 aa		13.96	□□□□□ -0.17
MATR3-231	ENST00000502394	ATG4C	Q96DT6	458 aa		13.96	□□□□□ -0.17
MATR3-231	ENST00000502394	TANGO6	Q9C0B7	1094 aa		13.96	□□□□□ -0.17
MATR3-231	ENST00000502394	AGTPBP1	Q9UPW5	1226 aa		13.96	□□□□□ -0.17
MATR3-231	ENST00000502394		A0A0G2JMZ2	1700 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	SMCO2	A6NFE2	343 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	VWA5A	O00534	786 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	OPLAH	O14841	1288 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	TOMM70	O94826	608 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	ICAM1	P05362	532 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	ZBTB48	P10074	688 aa	Predicted RBP	13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	CLK2	P49760	499 aa	Known RBP	13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	DNM1	Q05193	864 aa	Known RBP	13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	SNAPC2	Q13487	334 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	COG2	Q14746	738 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	EARS2	Q5JPH6	523 aa	Known RBP	13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	SPRYD7	Q5W111	196 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	ATL3	Q6DD88	541 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	POTEE	Q6S8J3	1075 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	LBX2	Q6XYB7	198 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	SAPCD2	Q86UD0	394 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	TEX2	Q8IWB9	1127 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	GBP4	Q96PP9	640 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	RIC8A	Q9NPQ8	531 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	PCDHA1	Q9Y5I3	950 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	MYH15	Q9Y2K3	1946 aa		13.95	□□□□□ -0.18
MATR3-231	ENST00000502394	ATP2A1	O14983	1001 aa		13.94	□□□□□ -0.18
MATR3-231	ENST00000502394	TAL1	P17542	331 aa	Predicted RBP	13.94	□□□□□ -0.18
MATR3-231	ENST00000502394	GNA11	P29992	359 aa		13.94	□□□□□ -0.18
MATR3-231	ENST00000502394	MCM4	P33991	863 aa		13.94	□□□□□ -0.18
MATR3-231	ENST00000502394	HUNK	P57058	714 aa		13.94	□□□□□ -0.18
MATR3-231	ENST00000502394	TRAF1	Q13077	416 aa		13.94	□□□□□ -0.18
MATR3-231	ENST00000502394	NOM1	Q5C9Z4	860 aa	Known RBP	13.94	□□□□□ -0.18
MATR3-231	ENST00000502394	GADL1	Q6ZQY3	521 aa		13.94	□□□□□ -0.18
MATR3-231	ENST00000502394	FASTKD5	Q7L8L6	764 aa	Known RBP	13.94	□□□□□ -0.18
MATR3-231	ENST00000502394	RASAL3	Q86YV0	1011 aa		13.94	□□□□□ -0.18
MATR3-231	ENST00000502394	TMEM87A	Q8NBN3	555 aa		13.94	□□□□□ -0.18
MATR3-231	ENST00000502394	BRMS1	Q9HCU9	246 aa		13.94	□□□□□ -0.18
MATR3-231	ENST00000502394	C6orf50	Q9HD87	102 aa		13.94	□□□□□ -0.18
MATR3-231	ENST00000502394	PCDHA6	Q9UN73	950 aa		13.94	□□□□□ -0.18
MATR3-231	ENST00000502394	PCDHA8	Q9Y5H6	950 aa		13.94	□□□□□ -0.18
MATR3-231	ENST00000502394	TLL2	Q9Y6L7	1015 aa		13.94	□□□□□ -0.18
MATR3-231	ENST00000502394	TESPA1	A2RU30	521 aa	Predicted RBP	13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	FAM205C	A6NFA0	338 aa		13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	TOB1	P50616	345 aa	Predicted RBP	13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	ADCY7	P51828	1080 aa		13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	GTF2A2	P52657	109 aa		13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	OAZ1	P54368	228 aa		13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	GHRHR	Q02643	423 aa		13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	FSTL1	Q12841	308 aa		13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	NFKBIB	Q15653	356 aa		13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	CCDC174	Q6PII3	467 aa		13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	RASGRP4	Q8TDF6	673 aa		13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	USP28	Q96RU2	1077 aa		13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	HOXC10	Q9NYD6	342 aa		13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	ZNF214	Q9UL59	606 aa	Predicted RBP	13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	CNPY2	Q9Y2B0	182 aa		13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	SMCHD1	A6NHR9	2005 aa		13.93	□□□□□ -0.18
MATR3-231	ENST00000502394	ABCB11	O95342	1321 aa		13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	TCHH	Q07283	1943 aa		13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	MEIS2	O14770	477 aa		13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	ZBED4	O75132	1171 aa		13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	CETP	P11597	493 aa		13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	YY1	P25490	414 aa		13.92	□□□□□ -0.18
MATR3-231	ENST00000502394	NASP	P49321	788 aa	Predicted RBP	13.92	□□□□□ -0.18

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