RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 NTRK3Q16288 839 aa16.43■□□□□ 0.22
RNF4-202ENST00000502316 FBXO46Q6PJ61 603 aaPredicted RBP16.43■□□□□ 0.22
RNF4-202ENST00000502316 HOMER1Q86YM7 354 aa16.43■□□□□ 0.22
RNF4-202ENST00000502316 CLEC4DQ8WXI8 215 aa16.43■□□□□ 0.22
RNF4-202ENST00000502316 RRP36Q96EU6 259 aaKnown RBP16.43■□□□□ 0.22
RNF4-202ENST00000502316 HOMER2Q9NSB8 354 aa16.43■□□□□ 0.22
RNF4-202ENST00000502316 ABCB11O95342 1321 aa16.43■□□□□ 0.22
RNF4-202ENST00000502316 BRCA2P51587 3418 aa16.42■□□□□ 0.22
RNF4-202ENST00000502316 PFKFB2O60825 505 aa16.42■□□□□ 0.22
RNF4-202ENST00000502316 IFNAR1P17181 557 aa16.42■□□□□ 0.22
RNF4-202ENST00000502316 SLC4A3P48751 1232 aa16.42■□□□□ 0.22
RNF4-202ENST00000502316 TRAF1Q13077 416 aa16.42■□□□□ 0.22
RNF4-202ENST00000502316 MAP2K5Q13163 448 aa16.42■□□□□ 0.22
RNF4-202ENST00000502316 KCTD2Q14681 263 aa16.42■□□□□ 0.22
RNF4-202ENST00000502316 USH1GQ495M9 461 aa16.42■□□□□ 0.22
RNF4-202ENST00000502316 MUM1L1Q5H9M0 696 aa16.42■□□□□ 0.22
RNF4-202ENST00000502316 COL13A1Q5TAT6 717 aaPredicted RBP16.42■□□□□ 0.22
RNF4-202ENST00000502316 CCDC82Q8N4S0 544 aa16.42■□□□□ 0.22
RNF4-202ENST00000502316 MMP19Q99542 508 aa16.42■□□□□ 0.22
RNF4-202ENST00000502316 MAF1Q9H063 256 aa16.42■□□□□ 0.22
RNF4-202ENST00000502316 NCOA5Q9HCD5 579 aaKnown RBP16.42■□□□□ 0.22
RNF4-202ENST00000502316 A1CFQ9NQ94 594 aaKnown RBP16.42■□□□□ 0.22
RNF4-202ENST00000502316 PTCH2Q9Y6C5 1203 aa16.42■□□□□ 0.22
RNF4-202ENST00000502316 DNAJC25-GNG10A0A024R161 153 aa16.41■□□□□ 0.22
RNF4-202ENST00000502316 NFIBO00712 420 aa16.41■□□□□ 0.22
RNF4-202ENST00000502316 RGS2P41220 211 aa16.41■□□□□ 0.22
RNF4-202ENST00000502316 CCT2P78371 535 aaKnown RBP16.41■□□□□ 0.22
RNF4-202ENST00000502316 SCRN1Q12765 414 aa16.41■□□□□ 0.22
RNF4-202ENST00000502316 ME3Q16798 604 aa16.41■□□□□ 0.22
RNF4-202ENST00000502316 RGS22Q8NE09 1264 aa16.41■□□□□ 0.22
RNF4-202ENST00000502316 APBA2Q99767 749 aa16.41■□□□□ 0.22
RNF4-202ENST00000502316 MCOLN1Q9GZU1 580 aa16.41■□□□□ 0.22
RNF4-202ENST00000502316 SLKQ9H2G2 1235 aaPredicted RBP16.41■□□□□ 0.22
RNF4-202ENST00000502316 SEC63Q9UGP8 760 aaKnown RBP16.41■□□□□ 0.22
RNF4-202ENST00000502316 PCDHA1Q9Y5I3 950 aa16.41■□□□□ 0.22
RNF4-202ENST00000502316 PFASO15067 1338 aa16.41■□□□□ 0.22
RNF4-202ENST00000502316 ST18O60284 1047 aa16.4■□□□□ 0.22
RNF4-202ENST00000502316 COBLO75128 1261 aa16.4■□□□□ 0.22
RNF4-202ENST00000502316 LARGE1O95461 756 aa16.4■□□□□ 0.22
RNF4-202ENST00000502316 GHRHRQ02643 423 aa16.4■□□□□ 0.22
RNF4-202ENST00000502316 STK3Q13188 491 aa16.4■□□□□ 0.22
RNF4-202ENST00000502316 ANKRD35Q8N283 1001 aa16.4■□□□□ 0.22
RNF4-202ENST00000502316 RAET1EQ8TD07 263 aa16.4■□□□□ 0.22
RNF4-202ENST00000502316 PXYLP1Q8TE99 480 aa16.4■□□□□ 0.22
RNF4-202ENST00000502316 CYP39A1Q9NYL5 469 aa16.4■□□□□ 0.22
RNF4-202ENST00000502316 LIMCH1Q9UPQ0 1083 aa16.4■□□□□ 0.22
RNF4-202ENST00000502316 DIS3Q9Y2L1 958 aaKnown RBP16.4■□□□□ 0.22
RNF4-202ENST00000502316 MRPL11Q9Y3B7 192 aaKnown RBP16.4■□□□□ 0.22
RNF4-202ENST00000502316 RBBP6Q7Z6E9 1792 aaKnown RBP16.4■□□□□ 0.22
RNF4-202ENST00000502316 ZNFX1Q9P2E3 1918 aaKnown RBP16.39■□□□□ 0.21
RNF4-202ENST00000502316 OPLAHO14841 1288 aa16.39■□□□□ 0.21
RNF4-202ENST00000502316 IGHA2P01877 340 aa16.39■□□□□ 0.21
RNF4-202ENST00000502316 ZNF792Q3KQV3 632 aa16.39■□□□□ 0.21
RNF4-202ENST00000502316 DPP9Q86TI2 863 aa16.39■□□□□ 0.21
RNF4-202ENST00000502316 SLAIN1Q8ND83 568 aa16.39■□□□□ 0.21
RNF4-202ENST00000502316 PIBF1Q8WXW3 757 aa16.39■□□□□ 0.21
RNF4-202ENST00000502316 GTF3C6Q969F1 213 aa16.39■□□□□ 0.21
RNF4-202ENST00000502316 RNF26Q9BY78 433 aaPredicted RBP16.39■□□□□ 0.21
RNF4-202ENST00000502316 SLC5A4Q9NY91 659 aa16.39■□□□□ 0.21
RNF4-202ENST00000502316 RBM27Q9P2N5 1060 aaKnown RBP16.39■□□□□ 0.21
RNF4-202ENST00000502316 V9GY48 417 aaPredicted RBP16.39■□□□□ 0.21
RNF4-202ENST00000502316 hCG_1642624A0A1W2PR95 340 aa16.38■□□□□ 0.21
RNF4-202ENST00000502316 hCG_1984214I3L0E3 225 aa16.38■□□□□ 0.21
RNF4-202ENST00000502316 CPLX1O14810 134 aa16.38■□□□□ 0.21
RNF4-202ENST00000502316 PRPF3O43395 683 aaKnown RBP16.38■□□□□ 0.21
RNF4-202ENST00000502316 ADCY3O60266 1144 aa16.38■□□□□ 0.21
RNF4-202ENST00000502316 PGK2P07205 417 aa16.38■□□□□ 0.21
RNF4-202ENST00000502316 CYP2B6P20813 491 aa16.38■□□□□ 0.21
RNF4-202ENST00000502316 CPLX2Q6PUV4 134 aaKnown RBP16.38■□□□□ 0.21
RNF4-202ENST00000502316 NSMFQ6X4W1 530 aa16.38■□□□□ 0.21
RNF4-202ENST00000502316 NOL8Q76FK4 1167 aaKnown RBP16.38■□□□□ 0.21
RNF4-202ENST00000502316 TRMT44Q8IYL2 757 aaKnown RBP16.38■□□□□ 0.21
RNF4-202ENST00000502316 SAMD3Q8N6K7 520 aa16.38■□□□□ 0.21
RNF4-202ENST00000502316 ZNF713Q8N859 430 aaPredicted RBP16.38■□□□□ 0.21
RNF4-202ENST00000502316 FAM133AQ8N9E0 248 aa16.38■□□□□ 0.21
RNF4-202ENST00000502316 NPLOC4Q8TAT6 608 aa16.38■□□□□ 0.21
RNF4-202ENST00000502316 PHKBQ93100 1093 aa16.38■□□□□ 0.21
RNF4-202ENST00000502316 DDX11Q96FC9 970 aa16.38■□□□□ 0.21
RNF4-202ENST00000502316 PLXNA1Q9UIW2 1896 aa16.37■□□□□ 0.21
RNF4-202ENST00000502316 LCTP09848 1927 aa16.37■□□□□ 0.21
RNF4-202ENST00000502316 GRK4P32298 578 aa16.37■□□□□ 0.21
RNF4-202ENST00000502316 PKN1Q16512 942 aa16.37■□□□□ 0.21
RNF4-202ENST00000502316 PFKFB3Q16875 520 aaPredicted RBP16.37■□□□□ 0.21
RNF4-202ENST00000502316 OLFML2BQ68BL8 750 aa16.37■□□□□ 0.21
RNF4-202ENST00000502316 WWC2Q6AWC2 1192 aa16.37■□□□□ 0.21
RNF4-202ENST00000502316 SLC30A10Q6XR72 485 aa16.37■□□□□ 0.21
RNF4-202ENST00000502316 RNF207Q6ZRF8 634 aa16.37■□□□□ 0.21
RNF4-202ENST00000502316 ZNF467Q7Z7K2 595 aaPredicted RBP16.37■□□□□ 0.21
RNF4-202ENST00000502316 MCF2L2Q86YR7 1114 aa16.37■□□□□ 0.21
RNF4-202ENST00000502316 TRIB2Q92519 343 aa16.37■□□□□ 0.21
RNF4-202ENST00000502316 MAML3Q96JK9 1138 aa16.37■□□□□ 0.21
RNF4-202ENST00000502316 ZSCAN31Q96LW9 406 aaPredicted RBP16.37■□□□□ 0.21
RNF4-202ENST00000502316 FGD4Q96M96 766 aa16.37■□□□□ 0.21
RNF4-202ENST00000502316 SH2B1Q9NRF2 756 aaPredicted RBP16.37■□□□□ 0.21
RNF4-202ENST00000502316 MAP3K20Q9NYL2 800 aaKnown RBP16.37■□□□□ 0.21
RNF4-202ENST00000502316 POTEB2H3BUK9 544 aa16.36■□□□□ 0.21
RNF4-202ENST00000502316 CDKL5O76039 1030 aa16.36■□□□□ 0.21
RNF4-202ENST00000502316 CD2BP2O95400 341 aaKnown RBP16.36■□□□□ 0.21
RNF4-202ENST00000502316 CTDNEP1O95476 244 aa16.36■□□□□ 0.21
RNF4-202ENST00000502316 SCG2P13521 617 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms