RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 RPUSD2Q8IZ73 545 aaKnown RBP16.94■□□□□ 0.3
VARS-228ENST00000495010 IFNL3Q8IZI9 196 aa16.94■□□□□ 0.3
VARS-228ENST00000495010 FAM133AQ8N9E0 248 aa16.94■□□□□ 0.3
VARS-228ENST00000495010 NEDD1Q8NHV4 660 aa16.94■□□□□ 0.3
VARS-228ENST00000495010 STAG1Q8WVM7 1258 aa16.94■□□□□ 0.3
VARS-228ENST00000495010 CHMP4CQ96CF2 233 aa16.94■□□□□ 0.3
VARS-228ENST00000495010 AGBL1Q96MI9 1066 aa16.94■□□□□ 0.3
VARS-228ENST00000495010 TRERF1Q96PN7 1200 aa16.94■□□□□ 0.3
VARS-228ENST00000495010 KATNBL1Q9H079 304 aa16.94■□□□□ 0.3
VARS-228ENST00000495010 EPB41L4AQ9HCS5 686 aaPredicted RBP16.94■□□□□ 0.3
VARS-228ENST00000495010 A1CFQ9NQ94 594 aaKnown RBP16.94■□□□□ 0.3
VARS-228ENST00000495010 MCM3APO60318 1980 aa16.94■□□□□ 0.3
VARS-228ENST00000495010 TFAP4Q01664 338 aa16.93■□□□□ 0.3
VARS-228ENST00000495010 SLC43A3Q8NBI5 491 aa16.93■□□□□ 0.3
VARS-228ENST00000495010 ADAMTS19Q8TE59 1207 aa16.93■□□□□ 0.3
VARS-228ENST00000495010 CXXC1Q9P0U4 656 aaPredicted RBP16.93■□□□□ 0.3
VARS-228ENST00000495010 GNEQ9Y223 722 aaKnown RBP16.93■□□□□ 0.3
VARS-228ENST00000495010 SLC4A7Q9Y6M7 1214 aa16.93■□□□□ 0.3
VARS-228ENST00000495010 EYSQ5T1H1 3165 aa16.93■□□□□ 0.3
VARS-228ENST00000495010 SOWAHBA6NEL2 793 aa16.92■□□□□ 0.3
VARS-228ENST00000495010 ZBBXA8MT70 800 aa16.92■□□□□ 0.3
VARS-228ENST00000495010 M0R2C6 588 aa16.92■□□□□ 0.3
VARS-228ENST00000495010 SMPD1P17405 629 aa16.92■□□□□ 0.3
VARS-228ENST00000495010 MCCP23508 829 aa16.92■□□□□ 0.3
VARS-228ENST00000495010 ADGRE1Q14246 886 aa16.92■□□□□ 0.3
VARS-228ENST00000495010 IQSEC1Q6DN90 963 aa16.92■□□□□ 0.3
VARS-228ENST00000495010 EEPD1Q7L9B9 569 aa16.92■□□□□ 0.3
VARS-228ENST00000495010 NAPBQ9H115 298 aa16.92■□□□□ 0.3
VARS-228ENST00000495010 VCANP13611 3396 aa16.92■□□□□ 0.3
VARS-228ENST00000495010 CDH23Q9H251 3354 aa16.92■□□□□ 0.3
VARS-228ENST00000495010 ASTN1O14525 1302 aa16.92■□□□□ 0.3
VARS-228ENST00000495010 UMODL1Q5DID0 1318 aa16.92■□□□□ 0.3
VARS-228ENST00000495010 TSHZ3Q63HK5 1081 aa16.91■□□□□ 0.3
VARS-228ENST00000495010 PPP2R2DQ66LE6 453 aa16.91■□□□□ 0.3
VARS-228ENST00000495010 MICALL1Q8N3F8 863 aa16.91■□□□□ 0.3
VARS-228ENST00000495010 GMCL1Q96IK5 515 aa16.91■□□□□ 0.3
VARS-228ENST00000495010 UHRF1Q96T88 793 aaPredicted RBP16.91■□□□□ 0.3
VARS-228ENST00000495010 NOC4LQ9BVI4 516 aaKnown RBP16.91■□□□□ 0.3
VARS-228ENST00000495010 TRPV6Q9H1D0 765 aa16.91■□□□□ 0.3
VARS-228ENST00000495010 STX8Q9UNK0 236 aa16.91■□□□□ 0.3
VARS-228ENST00000495010 YBX2Q9Y2T7 364 aaKnown RBP16.91■□□□□ 0.3
VARS-228ENST00000495010 Q9Y3F1 56 aa16.91■□□□□ 0.3
VARS-228ENST00000495010 PLIN4Q96Q06 1357 aa16.9■□□□□ 0.3
VARS-228ENST00000495010 B4GALT4O60513 344 aa16.9■□□□□ 0.3
VARS-228ENST00000495010 PSMC6P62333 389 aa16.9■□□□□ 0.3
VARS-228ENST00000495010 PPARAQ07869 468 aa16.9■□□□□ 0.3
VARS-228ENST00000495010 NSMFQ6X4W1 530 aa16.9■□□□□ 0.3
VARS-228ENST00000495010 KIAA1211Q6ZU35 1233 aa16.9■□□□□ 0.3
VARS-228ENST00000495010 KCTD1Q719H9 257 aa16.9■□□□□ 0.3
VARS-228ENST00000495010 FBXO16Q8IX29 292 aaPredicted RBP16.9■□□□□ 0.3
VARS-228ENST00000495010 MIER1Q8N108 512 aa16.9■□□□□ 0.3
VARS-228ENST00000495010 PDGFCQ9NRA1 345 aa16.9■□□□□ 0.3
VARS-228ENST00000495010 ZNF536O15090 1300 aa16.9■□□□□ 0.3
VARS-228ENST00000495010 TSPY2A6NKD2 308 aa16.89■□□□□ 0.29
VARS-228ENST00000495010 PLA2G6O60733 806 aa16.89■□□□□ 0.29
VARS-228ENST00000495010 SUPT20HL2P0C7V6 817 aa16.89■□□□□ 0.29
VARS-228ENST00000495010 RABGGTBP53611 331 aa16.89■□□□□ 0.29
VARS-228ENST00000495010 SNAP25P60880 206 aa16.89■□□□□ 0.29
VARS-228ENST00000495010 RCSD1Q6JBY9 416 aa16.89■□□□□ 0.29
VARS-228ENST00000495010 VTA1Q9NP79 307 aa16.89■□□□□ 0.29
VARS-228ENST00000495010 CYP39A1Q9NYL5 469 aa16.89■□□□□ 0.29
VARS-228ENST00000495010 CCPG1Q9ULG6 757 aa16.89■□□□□ 0.29
VARS-228ENST00000495010 MTMR7Q9Y216 660 aa16.89■□□□□ 0.29
VARS-228ENST00000495010 PCDHA11Q9Y5I1 949 aa16.89■□□□□ 0.29
VARS-228ENST00000495010 SPTBN5Q9NRC6 3674 aaKnown RBP16.89■□□□□ 0.29
VARS-228ENST00000495010 TTC28Q96AY4 2481 aa16.88■□□□□ 0.29
VARS-228ENST00000495010 ATP2A2P16615 1042 aaKnown RBP16.88■□□□□ 0.29
VARS-228ENST00000495010 SKIV2LQ15477 1246 aaKnown RBP16.88■□□□□ 0.29
VARS-228ENST00000495010 MUM1L1Q5H9M0 696 aa16.88■□□□□ 0.29
VARS-228ENST00000495010 TAPT1Q6NXT6 567 aa16.88■□□□□ 0.29
VARS-228ENST00000495010 SCLYQ96I15 445 aa16.88■□□□□ 0.29
VARS-228ENST00000495010 FSD1Q9BTV5 496 aa16.88■□□□□ 0.29
VARS-228ENST00000495010 WNT8AQ9H1J5 351 aa16.88■□□□□ 0.29
VARS-228ENST00000495010 GPHNQ9NQX3 736 aaPredicted RBP16.88■□□□□ 0.29
VARS-228ENST00000495010 POLR3EQ9NVU0 708 aa16.88■□□□□ 0.29
VARS-228ENST00000495010 ADD3Q9UEY8 706 aaKnown RBP16.88■□□□□ 0.29
VARS-228ENST00000495010 RCAN3Q9UKA8 241 aa16.88■□□□□ 0.29
VARS-228ENST00000495010 PRR12Q9ULL5 1215 aa16.88■□□□□ 0.29
VARS-228ENST00000495010 PRUNE2Q8WUY3 3088 aa16.88■□□□□ 0.29
VARS-228ENST00000495010 GRIN2DO15399 1336 aa16.88■□□□□ 0.29
VARS-228ENST00000495010 ERC2O15083 957 aa16.87■□□□□ 0.29
VARS-228ENST00000495010 PFKMP08237 780 aa16.87■□□□□ 0.29
VARS-228ENST00000495010 PTGS1P23219 599 aa16.87■□□□□ 0.29
VARS-228ENST00000495010 AAK1Q2M2I8 961 aa16.87■□□□□ 0.29
VARS-228ENST00000495010 CCDC96Q2M329 555 aa16.87■□□□□ 0.29
VARS-228ENST00000495010 SEC62Q99442 399 aaKnown RBP16.87■□□□□ 0.29
VARS-228ENST00000495010 ALDH8A1Q9H2A2 487 aaPredicted RBP16.87■□□□□ 0.29
VARS-228ENST00000495010 DDX49Q9Y6V7 483 aaKnown RBP16.87■□□□□ 0.29
VARS-228ENST00000495010 MYO9BQ13459 2157 aa16.87■□□□□ 0.29
VARS-228ENST00000495010 GTPBP6O43824 516 aaPredicted RBP16.86■□□□□ 0.29
VARS-228ENST00000495010 MYL3P08590 195 aa16.86■□□□□ 0.29
VARS-228ENST00000495010 ACTN1P12814 892 aa16.86■□□□□ 0.29
VARS-228ENST00000495010 MYOGP15173 224 aa16.86■□□□□ 0.29
VARS-228ENST00000495010 CPT1AP50416 773 aa16.86■□□□□ 0.29
VARS-228ENST00000495010 DUSP28Q4G0W2 176 aa16.86■□□□□ 0.29
VARS-228ENST00000495010 BRDTQ58F21 947 aaPredicted RBP16.86■□□□□ 0.29
VARS-228ENST00000495010 TMEM67Q5HYA8 995 aa16.86■□□□□ 0.29
VARS-228ENST00000495010 WDR11Q9BZH6 1224 aa16.86■□□□□ 0.29
VARS-228ENST00000495010 DCTPP1Q9H773 170 aa16.86■□□□□ 0.29
VARS-228ENST00000495010 GBF1Q92538 1859 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms