RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 HHIPL1Q96JK4 782 aa7.31□□□□□ -1.24
HMGB1P38-201ENST00000490557 IER2Q9BTL4 223 aa7.31□□□□□ -1.24
HMGB1P38-201ENST00000490557 GPR160Q9UJ42 338 aa7.31□□□□□ -1.24
HMGB1P38-201ENST00000490557 ZNF281Q9Y2X9 895 aa7.31□□□□□ -1.24
HMGB1P38-201ENST00000490557 TAF6LQ9Y6J9 622 aa7.31□□□□□ -1.24
HMGB1P38-201ENST00000490557 PRODHO43272 600 aa7.3□□□□□ -1.24
HMGB1P38-201ENST00000490557 DIAPH1O60610 1272 aaKnown RBP7.3□□□□□ -1.24
HMGB1P38-201ENST00000490557 HPXP02790 462 aa7.3□□□□□ -1.24
HMGB1P38-201ENST00000490557 LILRA2Q8N149 483 aa7.3□□□□□ -1.24
HMGB1P38-201ENST00000490557 FLAD1Q8NFF5 587 aa7.3□□□□□ -1.24
HMGB1P38-201ENST00000490557 ABHD4Q8TB40 342 aa7.3□□□□□ -1.24
HMGB1P38-201ENST00000490557 KIRREL1Q96J84 757 aa7.3□□□□□ -1.24
HMGB1P38-201ENST00000490557 GPRC5CQ9NQ84 441 aa7.3□□□□□ -1.24
HMGB1P38-201ENST00000490557 CLEC1BQ9P126 229 aa7.3□□□□□ -1.24
HMGB1P38-201ENST00000490557 A0A1W2PQ45 241 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P38-201ENST00000490557 A0A1W2PQY0 241 aa7.29□□□□□ -1.24
HMGB1P38-201ENST00000490557 WTIPA6NIX2 430 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P38-201ENST00000490557 THBDP07204 575 aa7.29□□□□□ -1.24
HMGB1P38-201ENST00000490557 ERVFC1P60507 584 aa7.29□□□□□ -1.24
HMGB1P38-201ENST00000490557 GALNT18Q6P9A2 607 aa7.29□□□□□ -1.24
HMGB1P38-201ENST00000490557 NSMFQ6X4W1 530 aa7.29□□□□□ -1.24
HMGB1P38-201ENST00000490557 CBLL1Q75N03 491 aa7.29□□□□□ -1.24
HMGB1P38-201ENST00000490557 G6PC3Q9BUM1 346 aa7.29□□□□□ -1.24
HMGB1P38-201ENST00000490557 C19orf44Q9H6X5 657 aa7.29□□□□□ -1.24
HMGB1P38-201ENST00000490557 ARHGEF4Q9NR80 690 aa7.29□□□□□ -1.24
HMGB1P38-201ENST00000490557 C19orf73Q9NVV2 129 aa7.29□□□□□ -1.24
HMGB1P38-201ENST00000490557 A0A1W2PQJ5 194 aa7.28□□□□□ -1.24
HMGB1P38-201ENST00000490557 FADS2P1A8MWK0 482 aa7.28□□□□□ -1.24
HMGB1P38-201ENST00000490557 MEFVO15553 781 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P38-201ENST00000490557 PLS3P13797 630 aa7.28□□□□□ -1.24
HMGB1P38-201ENST00000490557 GRIA2P42262 883 aa7.28□□□□□ -1.24
HMGB1P38-201ENST00000490557 GFRA1P56159 465 aa7.28□□□□□ -1.24
HMGB1P38-201ENST00000490557 RBM10P98175 930 aaKnown RBP7.28□□□□□ -1.24
HMGB1P38-201ENST00000490557 NR0B2Q15466 257 aa7.28□□□□□ -1.24
HMGB1P38-201ENST00000490557 SF1Q15637 639 aaKnown RBP7.28□□□□□ -1.24
HMGB1P38-201ENST00000490557 KCNMB1Q16558 191 aa7.28□□□□□ -1.24
HMGB1P38-201ENST00000490557 ZBTB38Q8NAP3 1195 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P38-201ENST00000490557 THAP3Q8WTV1 239 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P38-201ENST00000490557 COPS5Q92905 334 aa7.28□□□□□ -1.24
HMGB1P38-201ENST00000490557 SLC26A8Q96RN1 970 aa7.28□□□□□ -1.24
HMGB1P38-201ENST00000490557 PIF1Q9H611 641 aa7.28□□□□□ -1.24
HMGB1P38-201ENST00000490557 EBF1Q9UH73 591 aa7.28□□□□□ -1.24
HMGB1P38-201ENST00000490557 NRDCO43847 1150 aa7.27□□□□□ -1.25
HMGB1P38-201ENST00000490557 IGSF3O75054 1194 aa7.27□□□□□ -1.25
HMGB1P38-201ENST00000490557 FGFR1P11362 822 aa7.27□□□□□ -1.25
HMGB1P38-201ENST00000490557 PABPC1P11940 636 aaKnown RBP7.27□□□□□ -1.25
HMGB1P38-201ENST00000490557 L1CAMP32004 1257 aa7.27□□□□□ -1.25
HMGB1P38-201ENST00000490557 TRHRP34981 398 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P38-201ENST00000490557 PRSS53Q2L4Q9 553 aa7.27□□□□□ -1.25
HMGB1P38-201ENST00000490557 TMEM67Q5HYA8 995 aa7.27□□□□□ -1.25
HMGB1P38-201ENST00000490557 ZC3H12BQ5HYM0 836 aaKnown RBP7.27□□□□□ -1.25
HMGB1P38-201ENST00000490557 IQCEQ6IPM2 695 aa7.27□□□□□ -1.25
HMGB1P38-201ENST00000490557 ZSWIM9Q86XI8 627 aa7.27□□□□□ -1.25
HMGB1P38-201ENST00000490557 CPNE8Q86YQ8 564 aa7.27□□□□□ -1.25
HMGB1P38-201ENST00000490557 PPIL6Q8IXY8 311 aa7.27□□□□□ -1.25
HMGB1P38-201ENST00000490557 TMEM145Q8NBT3 493 aa7.27□□□□□ -1.25
HMGB1P38-201ENST00000490557 MYO1BO43795 1136 aa7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 SCG5P05408 212 aa7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 FAM153BP0C7A2 387 aa7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 JUNBP17275 347 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 ARL4AP40617 200 aa7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 MAP4K2Q12851 820 aa7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 SNX17Q15036 470 aa7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 LONRF2Q1L5Z9 754 aa7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 HSF5Q4G112 596 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 C2orf27AQ580R0 203 aa7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 E4F1Q66K89 784 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 USP53Q70EK8 1073 aa7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 NOP9Q86U38 636 aaKnown RBP7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 SLCO6A1Q86UG4 719 aa7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 SCUBE1Q8IWY4 988 aa7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 TMEM52Q8NDY8 209 aa7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 ZSWIM2Q8NEG5 633 aa7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 NUP43Q8NFH3 380 aa7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 DIO2Q92813 273 aa7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 JMJD8Q96S16 334 aa7.26□□□□□ -1.25
HMGB1P38-201ENST00000490557 TRBV23-1A0A0A0MS06 115 aa7.25□□□□□ -1.25
HMGB1P38-201ENST00000490557 ADCY3O60266 1144 aa7.25□□□□□ -1.25
HMGB1P38-201ENST00000490557 NPHS1O60500 1241 aa7.25□□□□□ -1.25
HMGB1P38-201ENST00000490557 PSPNO60542 156 aa7.25□□□□□ -1.25
HMGB1P38-201ENST00000490557 PRKCAP17252 672 aa7.25□□□□□ -1.25
HMGB1P38-201ENST00000490557 KCNAB2Q13303 367 aa7.25□□□□□ -1.25
HMGB1P38-201ENST00000490557 YOD1Q5VVQ6 348 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P38-201ENST00000490557 SIRT2Q8IXJ6 389 aa7.25□□□□□ -1.25
HMGB1P38-201ENST00000490557 NPLOC4Q8TAT6 608 aa7.25□□□□□ -1.25
HMGB1P38-201ENST00000490557 FRS2Q8WU20 508 aa7.25□□□□□ -1.25
HMGB1P38-201ENST00000490557 IMPACTQ9P2X3 320 aa7.25□□□□□ -1.25
HMGB1P38-201ENST00000490557 DLX3O60479 287 aa7.24□□□□□ -1.25
HMGB1P38-201ENST00000490557 APPP05067 770 aa7.24□□□□□ -1.25
HMGB1P38-201ENST00000490557 LTBRP36941 435 aa7.24□□□□□ -1.25
HMGB1P38-201ENST00000490557 SUMO1P63165 101 aaKnown RBP7.24□□□□□ -1.25
HMGB1P38-201ENST00000490557 TIGD5Q53EQ6 642 aa7.24□□□□□ -1.25
HMGB1P38-201ENST00000490557 MPZL3Q6UWV2 235 aa7.24□□□□□ -1.25
HMGB1P38-201ENST00000490557 LILRB2Q8N423 598 aa7.24□□□□□ -1.25
HMGB1P38-201ENST00000490557 USP33Q8TEY7 942 aa7.24□□□□□ -1.25
HMGB1P38-201ENST00000490557 SH3TC2Q8TF17 1288 aa7.24□□□□□ -1.25
HMGB1P38-201ENST00000490557 FAM168AQ92567 244 aa7.24□□□□□ -1.25
HMGB1P38-201ENST00000490557 MMP19Q99542 508 aa7.24□□□□□ -1.25
HMGB1P38-201ENST00000490557 RNF32Q9H0A6 362 aa7.24□□□□□ -1.25
HMGB1P38-201ENST00000490557 GLI1P08151 1106 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms