RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 EEF1DP3Q658K8 133 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 NFXL1Q6ZNB6 911 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 HOMER1Q86YM7 354 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 APPBP2Q92624 585 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 OSBP2Q969R2 916 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 EXOC2Q96KP1 924 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 DHRS4Q9BTZ2 278 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 PAK6Q9NQU5 681 aaPredicted RBP5.8□□□□□ -1.48
CD46-216ENST00000490278 FANCLQ9NW38 375 aa5.8□□□□□ -1.48
CD46-216ENST00000490278 FGF10O15520 208 aaPredicted RBP5.79□□□□□ -1.48
CD46-216ENST00000490278 HYAL3O43820 417 aaPredicted RBP5.79□□□□□ -1.48
CD46-216ENST00000490278 CDC45O75419 566 aa5.79□□□□□ -1.48
CD46-216ENST00000490278 THBDP07204 575 aa5.79□□□□□ -1.48
CD46-216ENST00000490278 L1CAMP32004 1257 aa5.79□□□□□ -1.48
CD46-216ENST00000490278 SUMO1P63165 101 aaKnown RBP5.79□□□□□ -1.48
CD46-216ENST00000490278 CYP4F3Q08477 520 aa5.79□□□□□ -1.48
CD46-216ENST00000490278 PRSS53Q2L4Q9 553 aa5.79□□□□□ -1.48
CD46-216ENST00000490278 ZPBP2Q6X784 338 aa5.79□□□□□ -1.48
CD46-216ENST00000490278 KSR1Q8IVT5 923 aa5.79□□□□□ -1.48
CD46-216ENST00000490278 TP53INP2Q8IXH6 220 aa5.79□□□□□ -1.48
CD46-216ENST00000490278 NAT16Q8N8M0 369 aa5.79□□□□□ -1.48
CD46-216ENST00000490278 TMEM145Q8NBT3 493 aa5.79□□□□□ -1.48
CD46-216ENST00000490278 AGBL5Q8NDL9 886 aa5.79□□□□□ -1.48
CD46-216ENST00000490278 KISS1RQ969F8 398 aaPredicted RBP5.79□□□□□ -1.48
CD46-216ENST00000490278 FCRL2Q96LA5 508 aaPredicted RBP5.79□□□□□ -1.48
CD46-216ENST00000490278 ALPK1Q96QP1 1244 aa5.79□□□□□ -1.48
CD46-216ENST00000490278 GPRC5CQ9NQ84 441 aa5.79□□□□□ -1.48
CD46-216ENST00000490278 SLAMF8Q9P0V8 285 aa5.79□□□□□ -1.48
CD46-216ENST00000490278 MRPS23Q9Y3D9 190 aaKnown RBP5.79□□□□□ -1.48
CD46-216ENST00000490278 CADPSQ9ULU8 1353 aa5.79□□□□□ -1.48
CD46-216ENST00000490278 ADAMTS4O75173 837 aa5.78□□□□□ -1.48
CD46-216ENST00000490278 DUSP4Q13115 394 aa5.78□□□□□ -1.48
CD46-216ENST00000490278 PLCL1Q15111 1095 aa5.78□□□□□ -1.48
CD46-216ENST00000490278 SLC35F1Q5T1Q4 408 aa5.78□□□□□ -1.48
CD46-216ENST00000490278 SLC23A3Q6PIS1 610 aa5.78□□□□□ -1.48
CD46-216ENST00000490278 CYP2R1Q6VVX0 501 aa5.78□□□□□ -1.48
CD46-216ENST00000490278 SYNPOQ8N3V7 929 aa5.78□□□□□ -1.48
CD46-216ENST00000490278 PI4K2BQ8TCG2 481 aa5.78□□□□□ -1.48
CD46-216ENST00000490278 C1orf159Q96HA4 380 aa5.78□□□□□ -1.48
CD46-216ENST00000490278 PTCHD1Q96NR3 888 aa5.78□□□□□ -1.48
CD46-216ENST00000490278 ERVK13-1Q9NX77 482 aa5.78□□□□□ -1.48
CD46-216ENST00000490278 DNAJC25-GNG10A0A024R161 153 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 TRBV23OR9-2A0A075B6M9 112 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 TBC1D8O95759 1140 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 ZGLP1P0C6A0 271 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 PLS3P13797 630 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 PAMP19021 973 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 HSD3B2P26439 372 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 TCEA2Q15560 299 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 RALGPS1Q5JS13 557 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 E4F1Q66K89 784 aaPredicted RBP5.77□□□□□ -1.49
CD46-216ENST00000490278 C16orf86Q6ZW13 317 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 KREMEN2Q8NCW0 462 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 NPLOC4Q8TAT6 608 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 FRS2Q8WU20 508 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 LINC01599Q8WXQ3 324 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 CCDC120Q96HB5 630 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 ADAMTS10Q9H324 1103 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 PRDM7Q9NQW5 492 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 CLEC1BQ9P126 229 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 TNFRSF10DQ9UBN6 386 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 TMEM59LQ9UK28 342 aa5.77□□□□□ -1.49
CD46-216ENST00000490278 NPHP3-ACAD11A0A0J9YXS1 232 aa5.76□□□□□ -1.49
CD46-216ENST00000490278 MEFVO15553 781 aaPredicted RBP5.76□□□□□ -1.49
CD46-216ENST00000490278 CLSTN1O94985 981 aa5.76□□□□□ -1.49
CD46-216ENST00000490278 ASMTLO95671 621 aa5.76□□□□□ -1.49
CD46-216ENST00000490278 PLEKHG4Q58EX7 1191 aa5.76□□□□□ -1.49
CD46-216ENST00000490278 ACBD5Q5T8D3 534 aaPredicted RBP5.76□□□□□ -1.49
CD46-216ENST00000490278 HLA-DQA1Q5Y7H0 255 aa5.76□□□□□ -1.49
CD46-216ENST00000490278 IQCEQ6IPM2 695 aa5.76□□□□□ -1.49
CD46-216ENST00000490278 DENND5AQ6IQ26 1287 aa5.76□□□□□ -1.49
CD46-216ENST00000490278 USP53Q70EK8 1073 aa5.76□□□□□ -1.49
CD46-216ENST00000490278 PPIL6Q8IXY8 311 aa5.76□□□□□ -1.49
CD46-216ENST00000490278 TMEM52Q8NDY8 209 aa5.76□□□□□ -1.49
CD46-216ENST00000490278 MAP6Q96JE9 813 aa5.76□□□□□ -1.49
CD46-216ENST00000490278 G6PC3Q9BUM1 346 aa5.76□□□□□ -1.49
CD46-216ENST00000490278 EBF1Q9UH73 591 aa5.76□□□□□ -1.49
CD46-216ENST00000490278 BLACEA4D250 179 aa5.75□□□□□ -1.49
CD46-216ENST00000490278 FADS2P1A8MWK0 482 aa5.75□□□□□ -1.49
CD46-216ENST00000490278 KIR2DL1P43626 348 aaPredicted RBP5.75□□□□□ -1.49
CD46-216ENST00000490278 KIR2DL2P43627 348 aaPredicted RBP5.75□□□□□ -1.49
CD46-216ENST00000490278 HK2P52789 917 aa5.75□□□□□ -1.49
CD46-216ENST00000490278 KCNAB2Q13303 367 aa5.75□□□□□ -1.49
CD46-216ENST00000490278 LAPTM5Q13571 262 aa5.75□□□□□ -1.49
CD46-216ENST00000490278 TESK1Q15569 626 aa5.75□□□□□ -1.49
CD46-216ENST00000490278 NTRK3Q16288 839 aa5.75□□□□□ -1.49
CD46-216ENST00000490278 EGFLAMQ63HQ2 1017 aa5.75□□□□□ -1.49
CD46-216ENST00000490278 ANKS4BQ8N8V4 417 aa5.75□□□□□ -1.49
CD46-216ENST00000490278 DCAF4Q8WV16 495 aa5.75□□□□□ -1.49
CD46-216ENST00000490278 HHIPL1Q96JK4 782 aa5.75□□□□□ -1.49
CD46-216ENST00000490278 MMP19Q99542 508 aa5.75□□□□□ -1.49
CD46-216ENST00000490278 FEZ1Q99689 392 aa5.75□□□□□ -1.49
CD46-216ENST00000490278 NCOA5Q9HCD5 579 aaKnown RBP5.75□□□□□ -1.49
CD46-216ENST00000490278 MBNL3Q9NUK0 354 aaKnown RBP5.75□□□□□ -1.49
CD46-216ENST00000490278 ADAMTS6Q9UKP5 1117 aa5.75□□□□□ -1.49
CD46-216ENST00000490278 A0A1W2PQ45 241 aaPredicted RBP5.74□□□□□ -1.49
CD46-216ENST00000490278 A0A1W2PQY0 241 aa5.74□□□□□ -1.49
CD46-216ENST00000490278 PLD2O14939 933 aa5.74□□□□□ -1.49
CD46-216ENST00000490278 PPP1R12AO14974 1030 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms