RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 Q6ZUG5 572 aa12.86□□□□□ -0.35
CPSF7-212ENST00000489728 MICU3Q86XE3 530 aa12.86□□□□□ -0.35
CPSF7-212ENST00000489728 TEX2Q8IWB9 1127 aa12.86□□□□□ -0.35
CPSF7-212ENST00000489728 BRF1Q92994 677 aa12.86□□□□□ -0.35
CPSF7-212ENST00000489728 MAML3Q96JK9 1138 aa12.86□□□□□ -0.35
CPSF7-212ENST00000489728 TCEANC2Q96MN5 208 aa12.86□□□□□ -0.35
CPSF7-212ENST00000489728 A1CFQ9NQ94 594 aaKnown RBP12.86□□□□□ -0.35
CPSF7-212ENST00000489728 HOMER2Q9NSB8 354 aa12.86□□□□□ -0.35
CPSF7-212ENST00000489728 MAP3K20Q9NYL2 800 aaKnown RBP12.86□□□□□ -0.35
CPSF7-212ENST00000489728 BIN2Q9UBW5 565 aaPredicted RBP12.86□□□□□ -0.35
CPSF7-212ENST00000489728 PNMA6FA0A0J9YX94 578 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 CYTH3O43739 400 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 SNAP25P60880 206 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 GHRHRQ02643 423 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 ANKRD1Q15327 319 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 RTN1Q16799 776 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 MAMDC4Q6UXC1 1216 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 TMTC3Q6ZXV5 915 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 MCF2L2Q86YR7 1114 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 NPLOC4Q8TAT6 608 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 CLEC4DQ8WXI8 215 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 RRP36Q96EU6 259 aaKnown RBP12.85□□□□□ -0.35
CPSF7-212ENST00000489728 MYL10Q9BUA6 226 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 CPVLQ9H3G5 476 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 UPF2Q9HAU5 1272 aaKnown RBP12.85□□□□□ -0.35
CPSF7-212ENST00000489728 CYP39A1Q9NYL5 469 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 SEC63Q9UGP8 760 aaKnown RBP12.85□□□□□ -0.35
CPSF7-212ENST00000489728 BRPF3Q9ULD4 1205 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 MRPL11Q9Y3B7 192 aaKnown RBP12.85□□□□□ -0.35
CPSF7-212ENST00000489728 RPTORQ8N122 1335 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 SYNGAP1Q96PV0 1343 aa12.85□□□□□ -0.35
CPSF7-212ENST00000489728 GOLGA8AA7E2F4 631 aa12.84□□□□□ -0.35
CPSF7-212ENST00000489728 GOLGA8BA8MQT2 603 aa12.84□□□□□ -0.35
CPSF7-212ENST00000489728 POTEB2H3BUK9 544 aa12.84□□□□□ -0.35
CPSF7-212ENST00000489728 SEC24BO95487 1268 aa12.84□□□□□ -0.35
CPSF7-212ENST00000489728 CPA1P15085 419 aa12.84□□□□□ -0.35
CPSF7-212ENST00000489728 SLC4A3P48751 1232 aa12.84□□□□□ -0.35
CPSF7-212ENST00000489728 RBM25P49756 843 aaKnown RBP12.84□□□□□ -0.35
CPSF7-212ENST00000489728 CCL14Q16627 93 aa12.84□□□□□ -0.35
CPSF7-212ENST00000489728 SLC35G1Q2M3R5 365 aa12.84□□□□□ -0.35
CPSF7-212ENST00000489728 MUM1L1Q5H9M0 696 aa12.84□□□□□ -0.35
CPSF7-212ENST00000489728 FAM133AQ8N9E0 248 aa12.84□□□□□ -0.35
CPSF7-212ENST00000489728 ZNF274Q96GC6 653 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-212ENST00000489728 TMEM106CQ9BVX2 250 aa12.84□□□□□ -0.35
CPSF7-212ENST00000489728 HMX1Q9NP08 348 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-212ENST00000489728 PAK6Q9NQU5 681 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-212ENST00000489728 PDRG1Q9NUG6 133 aa12.84□□□□□ -0.35
CPSF7-212ENST00000489728 RBM27Q9P2N5 1060 aaKnown RBP12.84□□□□□ -0.35
CPSF7-212ENST00000489728 ADD3Q9UEY8 706 aaKnown RBP12.84□□□□□ -0.35
CPSF7-212ENST00000489728 CCDC85CA6NKD9 419 aa12.83□□□□□ -0.36
CPSF7-212ENST00000489728 hCG_1984214I3L0E3 225 aa12.83□□□□□ -0.36
CPSF7-212ENST00000489728 NFIBO00712 420 aa12.83□□□□□ -0.36
CPSF7-212ENST00000489728 MSCO60682 206 aa12.83□□□□□ -0.36
CPSF7-212ENST00000489728 PLEKHA8P1O95397 391 aa12.83□□□□□ -0.36
CPSF7-212ENST00000489728 PGK2P07205 417 aa12.83□□□□□ -0.36
CPSF7-212ENST00000489728 GJB1P08034 283 aa12.83□□□□□ -0.36
CPSF7-212ENST00000489728 CCL5P13501 91 aa12.83□□□□□ -0.36
CPSF7-212ENST00000489728 PRKAR2AP13861 404 aaKnown RBP12.83□□□□□ -0.36
CPSF7-212ENST00000489728 METAP2P50579 478 aaKnown RBP eCLIP12.83□□□□□ -0.36
CPSF7-212ENST00000489728 APOBRQ0VD83 1088 aa12.83□□□□□ -0.36
CPSF7-212ENST00000489728 TOB2Q14106 344 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-212ENST00000489728 USH1GQ495M9 461 aa12.83□□□□□ -0.36
CPSF7-212ENST00000489728 RNF207Q6ZRF8 634 aa12.83□□□□□ -0.36
CPSF7-212ENST00000489728 SRBD1Q8N5C6 995 aaKnown RBP12.83□□□□□ -0.36
CPSF7-212ENST00000489728 ZNF713Q8N859 430 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-212ENST00000489728 PIGSQ96S52 555 aa12.83□□□□□ -0.36
CPSF7-212ENST00000489728 TINF2Q9BSI4 451 aa12.83□□□□□ -0.36
CPSF7-212ENST00000489728 UPF3BQ9BZI7 483 aaKnown RBP12.83□□□□□ -0.36
CPSF7-212ENST00000489728 VAT1LQ9HCJ6 419 aa12.83□□□□□ -0.36
CPSF7-212ENST00000489728 FLRT1Q9NZU1 646 aa12.83□□□□□ -0.36
CPSF7-212ENST00000489728 PCDHA1Q9Y5I3 950 aa12.83□□□□□ -0.36
CPSF7-212ENST00000489728 ASB14A6NK59 587 aa12.82□□□□□ -0.36
CPSF7-212ENST00000489728 PPP1R11O60927 126 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-212ENST00000489728 CYBAP13498 195 aa12.82□□□□□ -0.36
CPSF7-212ENST00000489728 RXRAP19793 462 aa12.82□□□□□ -0.36
CPSF7-212ENST00000489728 CACNB2Q08289 660 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-212ENST00000489728 FUT2Q10981 343 aa12.82□□□□□ -0.36
CPSF7-212ENST00000489728 NSMFQ6X4W1 530 aa12.82□□□□□ -0.36
CPSF7-212ENST00000489728 HOMER1Q86YM7 354 aa12.82□□□□□ -0.36
CPSF7-212ENST00000489728 DNERQ8NFT8 737 aa12.82□□□□□ -0.36
CPSF7-212ENST00000489728 MPHOSPH6Q99547 160 aaKnown RBP12.82□□□□□ -0.36
CPSF7-212ENST00000489728 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.82□□□□□ -0.364e-10■■■■□ 20.1
CPSF7-212ENST00000489728 RNF208Q9H0X6 261 aa12.82□□□□□ -0.36
CPSF7-212ENST00000489728 CNTNAP5Q8WYK1 1306 aa12.82□□□□□ -0.36
CPSF7-212ENST00000489728 B4DLN1 442 aa12.81□□□□□ -0.36
CPSF7-212ENST00000489728 PDIA3P30101 505 aaKnown RBP12.81□□□□□ -0.36
CPSF7-212ENST00000489728 GJA8P48165 433 aa12.81□□□□□ -0.36
CPSF7-212ENST00000489728 HSD17B4P51659 736 aa12.81□□□□□ -0.36
CPSF7-212ENST00000489728 MRPL12P52815 198 aaKnown RBP12.81□□□□□ -0.36
CPSF7-212ENST00000489728 RPS6P62753 249 aaKnown RBP12.81□□□□□ -0.36
CPSF7-212ENST00000489728 BAATQ14032 418 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-212ENST00000489728 MTFR1Q15390 333 aa12.81□□□□□ -0.36
CPSF7-212ENST00000489728 IFFO2Q5TF58 517 aa12.81□□□□□ -0.36
CPSF7-212ENST00000489728 PPP1R18Q6NYC8 613 aa12.81□□□□□ -0.36
CPSF7-212ENST00000489728 CCDC144CPQ8IYA2 1237 aa12.81□□□□□ -0.36
CPSF7-212ENST00000489728 MORC4Q8TE76 937 aa12.81□□□□□ -0.36
CPSF7-212ENST00000489728 FGD4Q96M96 766 aa12.81□□□□□ -0.36
CPSF7-212ENST00000489728 C22orf23Q9BZE7 217 aa12.81□□□□□ -0.36
CPSF7-212ENST00000489728 UNC93B1Q9H1C4 597 aa12.81□□□□□ -0.36
CPSF7-212ENST00000489728 FAM217BQ9NTX9 383 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms